RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 CCKP06307 115 aa13.32□□□□□ -0.28
CNEP1R1-203ENST00000458059 USP17L23D6RBM5 183 aa13.32□□□□□ -0.28
CNEP1R1-203ENST00000458059 ENHOQ6UWT2 76 aa13.32□□□□□ -0.28
CNEP1R1-203ENST00000458059 LAMTOR3Q9UHA4 124 aa13.31□□□□□ -0.28
CNEP1R1-203ENST00000458059 M0R2N4 97 aa13.3□□□□□ -0.28
CNEP1R1-203ENST00000458059 CYSRT1A8MQ03 144 aa13.3□□□□□ -0.28
CNEP1R1-203ENST00000458059 TMEM256-PLSCR3K7ERE1 68 aa13.28□□□□□ -0.28
CNEP1R1-203ENST00000458059 LYRM9A8MSI8 78 aa13.25□□□□□ -0.29
CNEP1R1-203ENST00000458059 JMJD7-PLA2G4BH0Y9G9 81 aa13.25□□□□□ -0.29
CNEP1R1-203ENST00000458059 HIGD2BQ4VC39 106 aa13.25□□□□□ -0.29
CNEP1R1-203ENST00000458059 Q6ZQY7 126 aa13.24□□□□□ -0.29
CNEP1R1-203ENST00000458059 SMIM9A6NGZ8 99 aa13.24□□□□□ -0.29
CNEP1R1-203ENST00000458059 NDUFC2O95298 119 aa13.23□□□□□ -0.29
CNEP1R1-203ENST00000458059 COX17Q14061 63 aa13.23□□□□□ -0.29
CNEP1R1-203ENST00000458059 LINC00575Q6W349 94 aa13.23□□□□□ -0.29
CNEP1R1-203ENST00000458059 SERP2Q8N6R1 65 aa13.22□□□□□ -0.29
CNEP1R1-203ENST00000458059 GHRHP01286 108 aa13.22□□□□□ -0.29
CNEP1R1-203ENST00000458059 LINC00167Q96N53 147 aa13.22□□□□□ -0.29
CNEP1R1-203ENST00000458059 TRBV10-3A0A0K0K1G6 114 aa13.21□□□□□ -0.29
CNEP1R1-203ENST00000458059 INAFM1C9JVW0 142 aa13.21□□□□□ -0.29
CNEP1R1-203ENST00000458059 HAMPP81172 84 aa13.21□□□□□ -0.29
CNEP1R1-203ENST00000458059 CRYGAP11844 174 aa13.2□□□□□ -0.3
CNEP1R1-203ENST00000458059 RBM3P98179 157 aaKnown RBP13.2□□□□□ -0.3
CNEP1R1-203ENST00000458059 DSCR8Q96T75 97 aa13.2□□□□□ -0.3
CNEP1R1-203ENST00000458059 TENM3Q9P273 2699 aa13.2□□□□□ -0.3
CNEP1R1-203ENST00000458059 UBL5Q9BZL1 73 aa13.2□□□□□ -0.3
CNEP1R1-203ENST00000458059 KMT2BQ9UMN6 2715 aaPredicted RBP13.2□□□□□ -0.3
CNEP1R1-203ENST00000458059 SCXQ7RTU7 201 aa13.19□□□□□ -0.3
CNEP1R1-203ENST00000458059 C9orf66Q5T8R8 295 aa13.19□□□□□ -0.3
CNEP1R1-203ENST00000458059 Q8NAQ8 132 aa13.19□□□□□ -0.3
CNEP1R1-203ENST00000458059 UPK3BQ9BT76 320 aa13.18□□□□□ -0.3
CNEP1R1-203ENST00000458059 APOC4P55056 127 aa13.17□□□□□ -0.3
CNEP1R1-203ENST00000458059 C6orf48Q9UBA6 75 aa13.17□□□□□ -0.3
CNEP1R1-203ENST00000458059 RETNQ9HD89 108 aa13.17□□□□□ -0.3
CNEP1R1-203ENST00000458059 F8P00451 2351 aa13.16□□□□□ -0.3
CNEP1R1-203ENST00000458059 SPART-AS1P0CW21 52 aa13.16□□□□□ -0.3
CNEP1R1-203ENST00000458059 NOTCH1P46531 2555 aa13.15□□□□□ -0.3
CNEP1R1-203ENST00000458059 LELP1Q5T871 98 aa13.14□□□□□ -0.31
CNEP1R1-203ENST00000458059 WFDC10BQ8IUB3 73 aa13.14□□□□□ -0.31
CNEP1R1-203ENST00000458059 Q6ZQT0 140 aa13.14□□□□□ -0.31
CNEP1R1-203ENST00000458059 C20orf197Q8N268 126 aa13.13□□□□□ -0.31
CNEP1R1-203ENST00000458059 STAB1Q9NY15 2570 aa13.13□□□□□ -0.31
CNEP1R1-203ENST00000458059 IGHV4-30-4P0DP06 118 aa13.13□□□□□ -0.31
CNEP1R1-203ENST00000458059 FLNBO75369 2602 aaKnown RBP13.12□□□□□ -0.31
CNEP1R1-203ENST00000458059 ZNF561-AS1K7EIQ3 104 aa13.12□□□□□ -0.31
CNEP1R1-203ENST00000458059 FAM19A5Q7Z5A7 132 aaPredicted RBP13.11□□□□□ -0.31
CNEP1R1-203ENST00000458059 J3KT08 172 aa13.11□□□□□ -0.31
CNEP1R1-203ENST00000458059 IGLV6-57P01721 117 aa13.11□□□□□ -0.31
CNEP1R1-203ENST00000458059 MAST4O15021 2626 aa13.11□□□□□ -0.31
CNEP1R1-203ENST00000458059 CAMK2N2Q96S95 79 aa13.11□□□□□ -0.31
CNEP1R1-203ENST00000458059 LYPD5Q6UWN5 251 aa13.1□□□□□ -0.31
CNEP1R1-203ENST00000458059 BAHCC1Q9P281 2608 aa13.1□□□□□ -0.31
CNEP1R1-203ENST00000458059 DIRC1Q969H9 104 aa13.09□□□□□ -0.31
CNEP1R1-203ENST00000458059 A0A0J9YWU9 116 aa13.09□□□□□ -0.31
CNEP1R1-203ENST00000458059 MIFP14174 115 aa13.08□□□□□ -0.31
CNEP1R1-203ENST00000458059 J3QKU1 62 aa13.08□□□□□ -0.32
CNEP1R1-203ENST00000458059 Q6ZVQ6 151 aa13.08□□□□□ -0.32
CNEP1R1-203ENST00000458059 ZNF73O43830 326 aaPredicted RBP13.08□□□□□ -0.32
CNEP1R1-203ENST00000458059 LINC01547P58512 204 aaPredicted RBP13.08□□□□□ -0.32
CNEP1R1-203ENST00000458059 PRR34Q9NV39 138 aa13.07□□□□□ -0.32
CNEP1R1-203ENST00000458059 FBN1P35555 2871 aaKnown RBP13.06□□□□□ -0.32
CNEP1R1-203ENST00000458059 TRAV10A0A0B4J240 114 aa13.05□□□□□ -0.32
CNEP1R1-203ENST00000458059 OXTP01178 125 aa13.05□□□□□ -0.32
CNEP1R1-203ENST00000458059 Q6ZRU5 148 aa13.05□□□□□ -0.32
CNEP1R1-203ENST00000458059 OXLD1Q5BKU9 147 aa13.05□□□□□ -0.32
CNEP1R1-203ENST00000458059 COX7BP24311 80 aa13.04□□□□□ -0.32
CNEP1R1-203ENST00000458059 DPH3Q96FX2 82 aa13.04□□□□□ -0.32
CNEP1R1-203ENST00000458059 ATP5EP2Q5VTU8 51 aa13.03□□□□□ -0.32
CNEP1R1-203ENST00000458059 KPRPQ5T749 579 aaPredicted RBP13.03□□□□□ -0.32
CNEP1R1-203ENST00000458059 MUC7Q8TAX7 377 aa13.03□□□□□ -0.32
CNEP1R1-203ENST00000458059 SNURFQ9Y675 71 aa13.03□□□□□ -0.32
CNEP1R1-203ENST00000458059 Q6ZTC4 211 aa13.02□□□□□ -0.33
CNEP1R1-203ENST00000458059 TMEM258P61165 79 aa13.02□□□□□ -0.33
CNEP1R1-203ENST00000458059 Q8N9L7 120 aa13.02□□□□□ -0.33
CNEP1R1-203ENST00000458059 DEFB105AQ8NG35 78 aa13.01□□□□□ -0.33
CNEP1R1-203ENST00000458059 LOC110117498A0A087WWA1 95 aa12.99□□□□□ -0.33
CNEP1R1-203ENST00000458059 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.99□□□□□ -0.33
CNEP1R1-203ENST00000458059 IGKV2D-24A0A075B6R9 120 aa12.99□□□□□ -0.33
CNEP1R1-203ENST00000458059 VPREB1P12018 145 aa12.98□□□□□ -0.33
CNEP1R1-203ENST00000458059 COL6A5A8TX70 2615 aa12.95□□□□□ -0.34
CNEP1R1-203ENST00000458059 ELOF1P60002 83 aaKnown RBP12.95□□□□□ -0.34
CNEP1R1-203ENST00000458059 C15orf56Q8N910 161 aa12.95□□□□□ -0.34
CNEP1R1-203ENST00000458059 ANK2Q01484 3957 aa12.95□□□□□ -0.34
CNEP1R1-203ENST00000458059 Q6ZRP5 223 aa12.94□□□□□ -0.34
CNEP1R1-203ENST00000458059 RMI2Q96E14 147 aa12.94□□□□□ -0.34
CNEP1R1-203ENST00000458059 ESRGQ1W209 222 aa12.94□□□□□ -0.34
CNEP1R1-203ENST00000458059 C3orf84H3BNL1 204 aa12.93□□□□□ -0.34
CNEP1R1-203ENST00000458059 GVQW2A0A096LPI5 108 aaPredicted RBP12.93□□□□□ -0.34
CNEP1R1-203ENST00000458059 C1orf43Q9BWL3 253 aa12.92□□□□□ -0.34
CNEP1R1-203ENST00000458059 TM2D3Q9BRN9 247 aa12.91□□□□□ -0.34
CNEP1R1-203ENST00000458059 C4orf26Q17RF5 130 aa12.91□□□□□ -0.34
CNEP1R1-203ENST00000458059 TRBV7-4A0A0J9YYF1 115 aa12.9□□□□□ -0.35
CNEP1R1-203ENST00000458059 M0R378 163 aa12.9□□□□□ -0.35
CNEP1R1-203ENST00000458059 NBEAL1Q6ZS30 2694 aa12.89□□□□□ -0.35
CNEP1R1-203ENST00000458059 RPL37AP8A6NKH3 93 aa12.89□□□□□ -0.35
CNEP1R1-203ENST00000458059 NDUFC2-KCTD14E9PQ53 114 aa12.89□□□□□ -0.35
CNEP1R1-203ENST00000458059 KRTAP26-1Q6PEX3 210 aa12.89□□□□□ -0.35
CNEP1R1-203ENST00000458059 EGFEM1PQ0D2K5 195 aa12.88□□□□□ -0.35
CNEP1R1-203ENST00000458059 KRTAP10-11P60412 298 aa12.87□□□□□ -0.35
CNEP1R1-203ENST00000458059 SERTAD4-AS1Q5TG53 156 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms