RNA–Protein interactions for RNA: ENST00000457408.6

TMED4-203, Transcript of transmembrane p24 trafficking protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED4, Length 2,322 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-203ENST00000457408 SMIM20Q8N5G0 67 aa13.75□□□□□ -0.21
TMED4-203ENST00000457408 IGKV2D-24A0A075B6R9 120 aa13.74□□□□□ -0.21
TMED4-203ENST00000457408 LINC01556Q5JQF7 62 aa13.74□□□□□ -0.21
TMED4-203ENST00000457408 LINC00588Q9Y4M8 146 aa13.74□□□□□ -0.21
TMED4-203ENST00000457408 OR13C6PQ8NH95 151 aa13.74□□□□□ -0.21
TMED4-203ENST00000457408 TRAV13-2A0A0B4J235 113 aa13.73□□□□□ -0.21
TMED4-203ENST00000457408 PRR3P79522 188 aaKnown RBP13.73□□□□□ -0.21
TMED4-203ENST00000457408 C1orf43Q9BWL3 253 aa13.73□□□□□ -0.21
TMED4-203ENST00000457408 ZNF561-AS1K7EIQ3 104 aa13.7□□□□□ -0.22
TMED4-203ENST00000457408 COX17Q14061 63 aa13.7□□□□□ -0.22
TMED4-203ENST00000457408 KRTAP26-1Q6PEX3 210 aa13.7□□□□□ -0.22
TMED4-203ENST00000457408 TRACP01848 142 aa13.69□□□□□ -0.22
TMED4-203ENST00000457408 DNAH10OSP0CZ25 163 aa13.67□□□□□ -0.22
TMED4-203ENST00000457408 LYSTQ99698 3801 aa13.67□□□□□ -0.22
TMED4-203ENST00000457408 SMIM11BQ8TCY0 68 aa13.66□□□□□ -0.22
TMED4-203ENST00000457408 DNAH9Q9NYC9 4486 aa13.66□□□□□ -0.22
TMED4-203ENST00000457408 ACYP1P07311 99 aa13.65□□□□□ -0.22
TMED4-203ENST00000457408 CAMK2N2Q96S95 79 aa13.65□□□□□ -0.22
TMED4-203ENST00000457408 C6orf48Q9UBA6 75 aa13.65□□□□□ -0.22
TMED4-203ENST00000457408 C15orf56Q8N910 161 aa13.64□□□□□ -0.23
TMED4-203ENST00000457408 B9D2Q9BPU9 175 aa13.64□□□□□ -0.23
TMED4-203ENST00000457408 NCR3O14931 201 aa13.63□□□□□ -0.23
TMED4-203ENST00000457408 Q8NDZ9 215 aa13.63□□□□□ -0.23
TMED4-203ENST00000457408 RPL28P46779 137 aaKnown RBP13.62□□□□□ -0.23
TMED4-203ENST00000457408 TENM2Q9NT68 2774 aa13.62□□□□□ -0.23
TMED4-203ENST00000457408 TRBV7-7A0A0K0K1E9 115 aa13.62□□□□□ -0.23
TMED4-203ENST00000457408 XAGE1AQ9HD64 81 aa13.62□□□□□ -0.23
TMED4-203ENST00000457408 BAALC-AS2P0C853 105 aa13.61□□□□□ -0.23
TMED4-203ENST00000457408 FAM218AQ96MZ4 157 aa13.61□□□□□ -0.23
TMED4-203ENST00000457408 Q6ZRU5 148 aa13.6□□□□□ -0.23
TMED4-203ENST00000457408 C22orf24Q9Y442 160 aa13.58□□□□□ -0.23
TMED4-203ENST00000457408 CASC10Q5T4H9 136 aa13.57□□□□□ -0.24
TMED4-203ENST00000457408 TMEM126AQ9H061 195 aa13.57□□□□□ -0.24
TMED4-203ENST00000457408 GVQW2A0A096LPI5 108 aaPredicted RBP13.56□□□□□ -0.24
TMED4-203ENST00000457408 CSMD3Q7Z407 3707 aa13.56□□□□□ -0.24
TMED4-203ENST00000457408 NDUFC2O95298 119 aa13.56□□□□□ -0.24
TMED4-203ENST00000457408 IMUPQ9GZP8 106 aa13.55□□□□□ -0.24
TMED4-203ENST00000457408 LECT2O14960 151 aa13.55□□□□□ -0.24
TMED4-203ENST00000457408 S100A7L2Q5SY68 101 aa13.55□□□□□ -0.24
TMED4-203ENST00000457408 DNHD1Q96M86 4753 aa13.54□□□□□ -0.24
TMED4-203ENST00000457408 A0A087WYN8 130 aa13.54□□□□□ -0.24
TMED4-203ENST00000457408 MEGF8Q7Z7M0 2845 aa13.54□□□□□ -0.24
TMED4-203ENST00000457408 RPL18AQ02543 176 aaKnown RBP13.53□□□□□ -0.24
TMED4-203ENST00000457408 INAFM2P0DMQ5 153 aa13.53□□□□□ -0.24
TMED4-203ENST00000457408 SDIM1Q6ZPB5 146 aa13.53□□□□□ -0.24
TMED4-203ENST00000457408 LINC00643Q86TS7 51 aa13.53□□□□□ -0.24
TMED4-203ENST00000457408 UBE2DNLQ8IWF7 75 aa13.53□□□□□ -0.24
TMED4-203ENST00000457408 SMCR5Q8TEV8 140 aa13.52□□□□□ -0.24
TMED4-203ENST00000457408 C2orf48Q96LS8 159 aa13.52□□□□□ -0.25
TMED4-203ENST00000457408 UPK3BQ9BT76 320 aa13.51□□□□□ -0.25
TMED4-203ENST00000457408 SYCNQ0VAF6 134 aa13.51□□□□□ -0.25
TMED4-203ENST00000457408 USP17L23D6RBM5 183 aa13.5□□□□□ -0.25
TMED4-203ENST00000457408 H0YGX0 51 aa13.49□□□□□ -0.25
TMED4-203ENST00000457408 MUC7Q8TAX7 377 aa13.49□□□□□ -0.25
TMED4-203ENST00000457408 APLNQ9ULZ1 77 aa13.49□□□□□ -0.25
TMED4-203ENST00000457408 PRKDCP78527 4128 aaKnown RBP13.48□□□□□ -0.25
TMED4-203ENST00000457408 DNAL4O96015 105 aa13.47□□□□□ -0.25
TMED4-203ENST00000457408 DNAH7Q8WXX0 4024 aa13.47□□□□□ -0.25
TMED4-203ENST00000457408 NDUFC2-KCTD14E9PQ53 114 aa13.47□□□□□ -0.25
TMED4-203ENST00000457408 Q6ZRP5 223 aa13.47□□□□□ -0.25
TMED4-203ENST00000457408 RMI2Q96E14 147 aa13.47□□□□□ -0.25
TMED4-203ENST00000457408 KRTAP1-5Q9BYS1 174 aa13.47□□□□□ -0.25
TMED4-203ENST00000457408 FAM236AA0A1B0GUQ0 79 aa13.46□□□□□ -0.25
TMED4-203ENST00000457408 FAM236BA0A1B0GV22 79 aa13.46□□□□□ -0.25
TMED4-203ENST00000457408 SLPIP03973 132 aa13.46□□□□□ -0.26
TMED4-203ENST00000457408 C6orf99Q4VX62 202 aa13.45□□□□□ -0.26
TMED4-203ENST00000457408 GAGE2AQ6NT46 116 aa13.45□□□□□ -0.26
TMED4-203ENST00000457408 DNAH1Q9P2D7 4330 aa13.44□□□□□ -0.26
TMED4-203ENST00000457408 TRBV10-3A0A0K0K1G6 114 aa13.42□□□□□ -0.26
TMED4-203ENST00000457408 C3orf22Q8N5N4 141 aa13.41□□□□□ -0.26
TMED4-203ENST00000457408 OBSCN-AS1Q96MR7 158 aa13.41□□□□□ -0.26
TMED4-203ENST00000457408 IGLV6-57P01721 117 aa13.4□□□□□ -0.26
TMED4-203ENST00000457408 DNAH10Q8IVF4 4471 aa13.4□□□□□ -0.26
TMED4-203ENST00000457408 PLECQ15149 4684 aaKnown RBP13.39□□□□□ -0.27
TMED4-203ENST00000457408 VPREB1P12018 145 aa13.39□□□□□ -0.27
TMED4-203ENST00000457408 C9orf153Q5TBE3 101 aa13.39□□□□□ -0.27
TMED4-203ENST00000457408 PSCAO43653 123 aa13.39□□□□□ -0.27
TMED4-203ENST00000457408 C9orf129Q5T035 196 aaKnown RBP13.38□□□□□ -0.27
TMED4-203ENST00000457408 F8WDY8 70 aa13.38□□□□□ -0.27
TMED4-203ENST00000457408 UQCRQO14949 82 aa13.38□□□□□ -0.27
TMED4-203ENST00000457408 NUPR2A6NF83 97 aa13.36□□□□□ -0.27
TMED4-203ENST00000457408 C14orf132Q9NPU4 83 aa13.36□□□□□ -0.27
TMED4-203ENST00000457408 DYNC2H1Q8NCM8 4307 aaKnown RBP13.36□□□□□ -0.27
TMED4-203ENST00000457408 TRAV23DV6A0A075B6W5 121 aa13.35□□□□□ -0.27
TMED4-203ENST00000457408 Q8N814 137 aa13.35□□□□□ -0.27
TMED4-203ENST00000457408 M0R378 163 aa13.33□□□□□ -0.28
TMED4-203ENST00000457408 ORMDL1Q9P0S3 153 aa13.33□□□□□ -0.28
TMED4-203ENST00000457408 STARD9Q9P2P6 4700 aa13.32□□□□□ -0.28
TMED4-203ENST00000457408 SERTAD4-AS1Q5TG53 156 aa13.32□□□□□ -0.28
TMED4-203ENST00000457408 LOC107984640A0A0U1RRK4 108 aa13.31□□□□□ -0.28
TMED4-203ENST00000457408 LINC00167Q96N53 147 aa13.31□□□□□ -0.28
TMED4-203ENST00000457408 FAM168BA1KXE4 195 aa13.3□□□□□ -0.28
TMED4-203ENST00000457408 NKAPP1Q8N9T2 125 aa13.3□□□□□ -0.28
TMED4-203ENST00000457408 A0A1B0GX51 115 aa13.3□□□□□ -0.28
TMED4-203ENST00000457408 ZNF73O43830 326 aaPredicted RBP13.3□□□□□ -0.28
TMED4-203ENST00000457408 DIRC1Q969H9 104 aa13.3□□□□□ -0.28
TMED4-203ENST00000457408 LINC00575Q6W349 94 aa13.29□□□□□ -0.28
TMED4-203ENST00000457408 HIST1H4AP62805 103 aaKnown RBP13.29□□□□□ -0.28
TMED4-203ENST00000457408 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.28□□□□□ -0.28
TMED4-203ENST00000457408 COX7CP15954 63 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 165.8 ms