RNA–Protein interactions for RNA: ENST00000456957.2

PKNOX1-204, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 3

Gene PKNOX1, Length 569 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-204ENST00000456957 A0A1W2PNN7 141 aa10.23□□□□□ -0.77
PKNOX1-204ENST00000456957 TMEM238C9JI98 176 aa10.23□□□□□ -0.77
PKNOX1-204ENST00000456957 SLC25A34Q6PIV7 304 aa10.23□□□□□ -0.77
PKNOX1-204ENST00000456957 CIRBP-AS1Q8TBR5 109 aa10.23□□□□□ -0.77
PKNOX1-204ENST00000456957 PCLOQ9Y6V0 5065 aa10.23□□□□□ -0.77
PKNOX1-204ENST00000456957 XGP55808 180 aa10.22□□□□□ -0.77
PKNOX1-204ENST00000456957 FAM19A5Q7Z5A7 132 aaPredicted RBP10.22□□□□□ -0.77
PKNOX1-204ENST00000456957 KRTAP7-1Q8IUC3 87 aa10.22□□□□□ -0.77
PKNOX1-204ENST00000456957 PLAC8Q9NZF1 115 aa10.22□□□□□ -0.77
PKNOX1-204ENST00000456957 NPC2P61916 151 aa10.21□□□□□ -0.77
PKNOX1-204ENST00000456957 SERTAD4-AS1Q5TG53 156 aa10.21□□□□□ -0.77
PKNOX1-204ENST00000456957 SOSTDC1Q6X4U4 206 aa10.21□□□□□ -0.77
PKNOX1-204ENST00000456957 SPANXDQ9BXN6 97 aa10.21□□□□□ -0.77
PKNOX1-204ENST00000456957 SPANXCQ9NY87 97 aa10.21□□□□□ -0.77
PKNOX1-204ENST00000456957 EPM2AB3EWF7 344 aa10.2□□□□□ -0.78
PKNOX1-204ENST00000456957 EIF4EBP3O60516 100 aaPredicted RBP10.2□□□□□ -0.78
PKNOX1-204ENST00000456957 CDK2AP2O75956 126 aa10.2□□□□□ -0.78
PKNOX1-204ENST00000456957 Q8NDZ9 215 aa10.2□□□□□ -0.78
PKNOX1-204ENST00000456957 C12orf57Q99622 126 aa10.2□□□□□ -0.78
PKNOX1-204ENST00000456957 PLA2G2DQ9UNK4 145 aa10.2□□□□□ -0.78
PKNOX1-204ENST00000456957 LOC107984156A0A0G2JMH3 177 aa10.19□□□□□ -0.78
PKNOX1-204ENST00000456957 C2orf91Q6ZV80 131 aa10.19□□□□□ -0.78
PKNOX1-204ENST00000456957 ARL17AQ8IVW1 177 aa10.19□□□□□ -0.78
PKNOX1-204ENST00000456957 LINC00308Q8TCZ7 52 aa10.19□□□□□ -0.78
PKNOX1-204ENST00000456957 SPANXB1Q9NS25 103 aaPredicted RBP10.19□□□□□ -0.78
PKNOX1-204ENST00000456957 APOBP04114 4563 aaKnown RBP10.19□□□□□ -0.78
PKNOX1-204ENST00000456957 MIEN1Q9BRT3 115 aa10.18□□□□□ -0.78
PKNOX1-204ENST00000456957 VPREB1P12018 145 aa10.17□□□□□ -0.78
PKNOX1-204ENST00000456957 PRO1933Q9H354 126 aa10.17□□□□□ -0.78
PKNOX1-204ENST00000456957 HIGD1BQ9P298 99 aa10.17□□□□□ -0.78
PKNOX1-204ENST00000456957 IGLV5-37A0A075B6J1 123 aa10.16□□□□□ -0.78
PKNOX1-204ENST00000456957 M0QXV9 152 aa10.16□□□□□ -0.78
PKNOX1-204ENST00000456957 Q6ZVH6 145 aa10.16□□□□□ -0.78
PKNOX1-204ENST00000456957 UQCR10Q9UDW1 63 aa10.16□□□□□ -0.78
PKNOX1-204ENST00000456957 SRSF9Q13242 221 aaKnown RBP eCLIP10.15□□□□□ -0.78
PKNOX1-204ENST00000456957 PHF5AQ7RTV0 110 aaKnown RBP10.15□□□□□ -0.78
PKNOX1-204ENST00000456957 LINC00518Q8N0U6 118 aa10.15□□□□□ -0.78
PKNOX1-204ENST00000456957 C22orf24Q9Y442 160 aa10.15□□□□□ -0.78
PKNOX1-204ENST00000456957 IFITM1P13164 125 aa10.14□□□□□ -0.79
PKNOX1-204ENST00000456957 RPL24P83731 157 aaKnown RBP10.14□□□□□ -0.79
PKNOX1-204ENST00000456957 MUSTN1Q8IVN3 82 aa10.14□□□□□ -0.79
PKNOX1-204ENST00000456957 NKAPP1Q8N9T2 125 aa10.14□□□□□ -0.79
PKNOX1-204ENST00000456957 PRR3P79522 188 aaKnown RBP10.13□□□□□ -0.79
PKNOX1-204ENST00000456957 NDUFC2O95298 119 aa10.12□□□□□ -0.79
PKNOX1-204ENST00000456957 MRPL55Q7Z7F7 128 aaKnown RBP10.12□□□□□ -0.79
PKNOX1-204ENST00000456957 COPS9Q8WXC6 57 aa10.12□□□□□ -0.79
PKNOX1-204ENST00000456957 HIST1H4GQ99525 98 aa10.12□□□□□ -0.79
PKNOX1-204ENST00000456957 PPDPFQ9H3Y8 114 aa10.12□□□□□ -0.79
PKNOX1-204ENST00000456957 NCR3O14931 201 aa10.11□□□□□ -0.79
PKNOX1-204ENST00000456957 SMR3BP02814 79 aaPredicted RBP10.11□□□□□ -0.79
PKNOX1-204ENST00000456957 C7orf33Q8WU49 177 aa10.11□□□□□ -0.79
PKNOX1-204ENST00000456957 GAGE10A6NGK3 116 aa10.1□□□□□ -0.79
PKNOX1-204ENST00000456957 LBHQ53QV2 105 aaPredicted RBP10.09□□□□□ -0.79
PKNOX1-204ENST00000456957 LINC00167Q96N53 147 aa10.09□□□□□ -0.79
PKNOX1-204ENST00000456957 M0R378 163 aa10.08□□□□□ -0.8
PKNOX1-204ENST00000456957 HNRNPA3P51991 378 aaKnown RBP10.08□□□□□ -0.8
PKNOX1-204ENST00000456957 KRTAP11-1Q8IUC1 163 aa10.08□□□□□ -0.8
PKNOX1-204ENST00000456957 LINC00528Q8N1L1 170 aa10.08□□□□□ -0.8
PKNOX1-204ENST00000456957 IGKV2-28A0A075B6P5 120 aa10.07□□□□□ -0.8
PKNOX1-204ENST00000456957 TRBV10-2A0A0K0K1G8 114 aa10.07□□□□□ -0.8
PKNOX1-204ENST00000456957 TSTD3H0UI37 97 aa10.07□□□□□ -0.8
PKNOX1-204ENST00000456957 IGKV2D-28P01615 120 aa10.07□□□□□ -0.8
PKNOX1-204ENST00000456957 UBE2BP63146 152 aa10.07□□□□□ -0.8
PKNOX1-204ENST00000456957 TAL2Q16559 108 aa10.07□□□□□ -0.8
PKNOX1-204ENST00000456957 HSPG2P98160 4391 aa10.06□□□□□ -0.8
PKNOX1-204ENST00000456957 RPL37AP8A6NKH3 93 aa10.06□□□□□ -0.8
PKNOX1-204ENST00000456957 A4D1N5 150 aa10.05□□□□□ -0.8
PKNOX1-204ENST00000456957 HSD52Q0P140 79 aa10.05□□□□□ -0.8
PKNOX1-204ENST00000456957 IGLV1-50A0A075B6I6 118 aa10.04□□□□□ -0.8
PKNOX1-204ENST00000456957 CEND1Q8N111 149 aa10.04□□□□□ -0.8
PKNOX1-204ENST00000456957 LINC00337Q8N6G1 96 aa10.04□□□□□ -0.8
PKNOX1-204ENST00000456957 TRBV10-3A0A0K0K1G6 114 aa10.03□□□□□ -0.8
PKNOX1-204ENST00000456957 KRTAP4-5Q9BYR2 181 aa10.03□□□□□ -0.8
PKNOX1-204ENST00000456957 IGLV6-57P01721 117 aa10.02□□□□□ -0.81
PKNOX1-204ENST00000456957 DDTP30046 118 aa10.02□□□□□ -0.81
PKNOX1-204ENST00000456957 S100A7L2Q5SY68 101 aa10.02□□□□□ -0.81
PKNOX1-204ENST00000456957 PSORS1C2Q9UIG4 136 aa10.02□□□□□ -0.81
PKNOX1-204ENST00000456957 FXYD2P54710 66 aa10.01□□□□□ -0.81
PKNOX1-204ENST00000456957 RPL37AP61513 92 aaKnown RBP10□□□□□ -0.81
PKNOX1-204ENST00000456957 Q8N1X5 172 aa10□□□□□ -0.81
PKNOX1-204ENST00000456957 OR13C6PQ8NH95 151 aa10□□□□□ -0.81
PKNOX1-204ENST00000456957 CTAG1AP78358 180 aa9.99□□□□□ -0.81
PKNOX1-204ENST00000456957 Q5VSD8 79 aa9.99□□□□□ -0.81
PKNOX1-204ENST00000456957 PRYO14603 147 aa9.98□□□□□ -0.81
PKNOX1-204ENST00000456957 KRTAP10-4P60372 401 aaPredicted RBP9.98□□□□□ -0.81
PKNOX1-204ENST00000456957 C1orf137Q5JT78 98 aa9.98□□□□□ -0.81
PKNOX1-204ENST00000456957 KCNQ1DNQ9H478 68 aa9.98□□□□□ -0.81
PKNOX1-204ENST00000456957 ABCA13Q86UQ4 5058 aa9.97□□□□□ -0.81
PKNOX1-204ENST00000456957 A6NDN8 102 aa9.97□□□□□ -0.81
PKNOX1-204ENST00000456957 FAM229AH3BQW9 127 aa9.97□□□□□ -0.81
PKNOX1-204ENST00000456957 REG3GQ6UW15 175 aa9.97□□□□□ -0.81
PKNOX1-204ENST00000456957 TMEM126AQ9H061 195 aa9.97□□□□□ -0.81
PKNOX1-204ENST00000456957 TRAV23DV6A0A075B6W5 121 aa9.96□□□□□ -0.82
PKNOX1-204ENST00000456957 TRAV13-2A0A0B4J235 113 aa9.96□□□□□ -0.82
PKNOX1-204ENST00000456957 TMEM238LA0A1B0GVL6 79 aa9.96□□□□□ -0.82
PKNOX1-204ENST00000456957 A6NJY4 79 aa9.96□□□□□ -0.82
PKNOX1-204ENST00000456957 CFC1BP0CG36 223 aa9.96□□□□□ -0.82
PKNOX1-204ENST00000456957 CFC1P0CG37 223 aa9.96□□□□□ -0.82
PKNOX1-204ENST00000456957 PLA2G1BP04054 148 aaKnown RBP9.95□□□□□ -0.82
PKNOX1-204ENST00000456957 FAT1Q14517 4588 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms