RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-208ENST00000456210 EPM2AB3EWF7 344 aa12.97□□□□□ -0.33
SEMA3B-208ENST00000456210 C6orf99Q4VX62 202 aa12.97□□□□□ -0.33
SEMA3B-208ENST00000456210 TRAV7A0A075B6U4 112 aa12.97□□□□□ -0.33
SEMA3B-208ENST00000456210 FAM236DA0A1B0GTK5 79 aa12.97□□□□□ -0.33
SEMA3B-208ENST00000456210 ZNF561-AS1K7EIQ3 104 aa12.97□□□□□ -0.33
SEMA3B-208ENST00000456210 FAM236CP0DP71 79 aa12.97□□□□□ -0.33
SEMA3B-208ENST00000456210 RBM3P98179 157 aaKnown RBP12.96□□□□□ -0.33
SEMA3B-208ENST00000456210 C6orf223Q8N319 242 aa12.96□□□□□ -0.33
SEMA3B-208ENST00000456210 LINC00612Q8N6U2 182 aa12.95□□□□□ -0.34
SEMA3B-208ENST00000456210 RNASE1P07998 156 aaKnown RBP12.94□□□□□ -0.34
SEMA3B-208ENST00000456210 LINC00482Q8N8I6 264 aa12.94□□□□□ -0.34
SEMA3B-208ENST00000456210 CD164L2Q6UWJ8 174 aa12.93□□□□□ -0.34
SEMA3B-208ENST00000456210 H7BZZ5 65 aa12.93□□□□□ -0.34
SEMA3B-208ENST00000456210 GYPEP15421 78 aa12.93□□□□□ -0.34
SEMA3B-208ENST00000456210 HRCT1Q6UXD1 115 aa12.93□□□□□ -0.34
SEMA3B-208ENST00000456210 CLPSL2Q6UWE3 100 aa12.92□□□□□ -0.34
SEMA3B-208ENST00000456210 Q8NDZ9 215 aa12.92□□□□□ -0.34
SEMA3B-208ENST00000456210 LINC01547P58512 204 aaPredicted RBP12.92□□□□□ -0.34
SEMA3B-208ENST00000456210 KLKP1Q107X0 134 aa12.92□□□□□ -0.34
SEMA3B-208ENST00000456210 IGLV1-51P01701 117 aa12.91□□□□□ -0.34
SEMA3B-208ENST00000456210 SERP1Q9Y6X1 66 aa12.91□□□□□ -0.34
SEMA3B-208ENST00000456210 C16orf95Q9H693 158 aa12.9□□□□□ -0.34
SEMA3B-208ENST00000456210 C9orf66Q5T8R8 295 aa12.9□□□□□ -0.34
SEMA3B-208ENST00000456210 MUC7Q8TAX7 377 aa12.9□□□□□ -0.34
SEMA3B-208ENST00000456210 Q6ZVQ6 151 aa12.89□□□□□ -0.35
SEMA3B-208ENST00000456210 WNK1Q9H4A3 2382 aa12.89□□□□□ -0.35
SEMA3B-208ENST00000456210 H3BQ85 93 aa12.89□□□□□ -0.35
SEMA3B-208ENST00000456210 PDE6GP18545 87 aa12.89□□□□□ -0.35
SEMA3B-208ENST00000456210 CXCL6P80162 114 aa12.89□□□□□ -0.35
SEMA3B-208ENST00000456210 LINC01006Q8NI28 216 aa12.89□□□□□ -0.35
SEMA3B-208ENST00000456210 DEFB130BP0DP73 79 aa12.88□□□□□ -0.35
SEMA3B-208ENST00000456210 DEFB130AP0DP74 79 aa12.88□□□□□ -0.35
SEMA3B-208ENST00000456210 C9orf116Q5BN46 136 aaPredicted RBP12.87□□□□□ -0.35
SEMA3B-208ENST00000456210 CHCHD10Q8WYQ3 142 aaPredicted RBP12.87□□□□□ -0.35
SEMA3B-208ENST00000456210 LAMTOR3Q9UHA4 124 aa12.87□□□□□ -0.35
SEMA3B-208ENST00000456210 M0R2N4 97 aa12.87□□□□□ -0.35
SEMA3B-208ENST00000456210 LINC00269Q8N2A0 174 aa12.86□□□□□ -0.35
SEMA3B-208ENST00000456210 IGLV6-57P01721 117 aa12.85□□□□□ -0.35
SEMA3B-208ENST00000456210 PRO0255Q9UI72 69 aa12.85□□□□□ -0.35
SEMA3B-208ENST00000456210 FBN1P35555 2871 aaKnown RBP12.84□□□□□ -0.35
SEMA3B-208ENST00000456210 ATRQ13535 2644 aa12.84□□□□□ -0.35
SEMA3B-208ENST00000456210 TRAV10A0A0B4J240 114 aa12.83□□□□□ -0.36
SEMA3B-208ENST00000456210 HAMPP81172 84 aa12.83□□□□□ -0.36
SEMA3B-208ENST00000456210 REG3AQ06141 175 aa12.81□□□□□ -0.36
SEMA3B-208ENST00000456210 MRAPQ8TCY5 172 aa12.81□□□□□ -0.36
SEMA3B-208ENST00000456210 Q6ZQY7 126 aa12.81□□□□□ -0.36
SEMA3B-208ENST00000456210 A0A0J9YWU9 116 aa12.79□□□□□ -0.36
SEMA3B-208ENST00000456210 IGHV4-30-4P0DP06 118 aa12.79□□□□□ -0.36
SEMA3B-208ENST00000456210 IGLV10-54A0A075B6I4 117 aa12.79□□□□□ -0.36
SEMA3B-208ENST00000456210 A0A096LPF7 62 aa12.79□□□□□ -0.36
SEMA3B-208ENST00000456210 TENM1Q9UKZ4 2725 aa12.78□□□□□ -0.36
SEMA3B-208ENST00000456210 ANGP03950 147 aaKnown RBP12.78□□□□□ -0.36
SEMA3B-208ENST00000456210 TRBV7-4A0A0J9YYF1 115 aa12.77□□□□□ -0.36
SEMA3B-208ENST00000456210 NDUFC1O43677 76 aa12.77□□□□□ -0.37
SEMA3B-208ENST00000456210 C10orf25Q5T742 122 aa12.77□□□□□ -0.37
SEMA3B-208ENST00000456210 SPATA3Q8NHX4 192 aa12.77□□□□□ -0.37
SEMA3B-208ENST00000456210 RMI2Q96E14 147 aa12.77□□□□□ -0.37
SEMA3B-208ENST00000456210 SPAG11BQ08648 103 aa12.76□□□□□ -0.37
SEMA3B-208ENST00000456210 UNQ6190/PRO20217Q6UXQ8 127 aa12.76□□□□□ -0.37
SEMA3B-208ENST00000456210 Q8N3U1 123 aa12.76□□□□□ -0.37
SEMA3B-208ENST00000456210 X6R8D5 127 aa12.76□□□□□ -0.37
SEMA3B-208ENST00000456210 SNURFQ9Y675 71 aa12.76□□□□□ -0.37
SEMA3B-208ENST00000456210 F8WEM9 126 aa12.75□□□□□ -0.37
SEMA3B-208ENST00000456210 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.75□□□□□ -0.37
SEMA3B-208ENST00000456210 DIRC1Q969H9 104 aa12.74□□□□□ -0.37
SEMA3B-208ENST00000456210 SMIM26A0A096LP01 95 aa12.73□□□□□ -0.37
SEMA3B-208ENST00000456210 ATP5EP56381 51 aaPredicted RBP12.73□□□□□ -0.37
SEMA3B-208ENST00000456210 GVQW2A0A096LPI5 108 aaPredicted RBP12.73□□□□□ -0.37
SEMA3B-208ENST00000456210 TRBV7-6A0A0J9YX20 115 aa12.71□□□□□ -0.37
SEMA3B-208ENST00000456210 LYRM9A8MSI8 78 aa12.71□□□□□ -0.37
SEMA3B-208ENST00000456210 TM2D3Q9BRN9 247 aa12.71□□□□□ -0.38
SEMA3B-208ENST00000456210 PRO0628Q9UI54 55 aa12.7□□□□□ -0.38
SEMA3B-208ENST00000456210 FP248Q71RG6 208 aaPredicted RBP12.69□□□□□ -0.38
SEMA3B-208ENST00000456210 COL6A5A8TX70 2615 aa12.69□□□□□ -0.38
SEMA3B-208ENST00000456210 ERC2-IT1O76042 136 aa12.69□□□□□ -0.38
SEMA3B-208ENST00000456210 ELOF1P60002 83 aaKnown RBP12.68□□□□□ -0.38
SEMA3B-208ENST00000456210 ZNF73O43830 326 aaPredicted RBP12.68□□□□□ -0.38
SEMA3B-208ENST00000456210 COX7BP24311 80 aa12.68□□□□□ -0.38
SEMA3B-208ENST00000456210 LINC00336Q6ZUF6 198 aa12.68□□□□□ -0.38
SEMA3B-208ENST00000456210 MIFP14174 115 aa12.67□□□□□ -0.38
SEMA3B-208ENST00000456210 NREPQ16612 68 aa12.66□□□□□ -0.38
SEMA3B-208ENST00000456210 STAB1Q9NY15 2570 aa12.66□□□□□ -0.38
SEMA3B-208ENST00000456210 SCXQ7RTU7 201 aa12.65□□□□□ -0.38
SEMA3B-208ENST00000456210 PRR34Q9NV39 138 aa12.65□□□□□ -0.38
SEMA3B-208ENST00000456210 KRTAP10-3P60369 221 aa12.64□□□□□ -0.39
SEMA3B-208ENST00000456210 C6orf48Q9UBA6 75 aa12.64□□□□□ -0.39
SEMA3B-208ENST00000456210 KRTAP24-1Q3LI83 254 aa12.63□□□□□ -0.39
SEMA3B-208ENST00000456210 BPY2O14599 106 aa12.63□□□□□ -0.39
SEMA3B-208ENST00000456210 TMEM254Q8TBM7 123 aa12.63□□□□□ -0.39
SEMA3B-208ENST00000456210 LELP1Q5T871 98 aa12.61□□□□□ -0.39
SEMA3B-208ENST00000456210 VWFP04275 2813 aa12.6□□□□□ -0.39
SEMA3B-208ENST00000456210 XAGE1AQ9HD64 81 aa12.6□□□□□ -0.39
SEMA3B-208ENST00000456210 CELA1Q9UNI1 258 aa12.6□□□□□ -0.39
SEMA3B-208ENST00000456210 TRRAPQ9Y4A5 3859 aa12.59□□□□□ -0.39
SEMA3B-208ENST00000456210 VPREB1P12018 145 aa12.58□□□□□ -0.39
SEMA3B-208ENST00000456210 IGKV4-1P06312 121 aa12.58□□□□□ -0.4
SEMA3B-208ENST00000456210 DAD1P61803 113 aa12.57□□□□□ -0.4
SEMA3B-208ENST00000456210 LINC00528Q8N1L1 170 aa12.57□□□□□ -0.4
SEMA3B-208ENST00000456210 KLK12Q9UKR0 248 aa12.57□□□□□ -0.4
SEMA3B-208ENST00000456210 OCR1Q9BZK8 76 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms