RNA–Protein interactions for RNA: ENST00000456096.6

TVP23A-202, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-202ENST00000456096 HIGD2AQ9BW72 106 aa9.56□□□□□ -0.88
TVP23A-202ENST00000456096 NDUFA5Q16718 116 aa9.55□□□□□ -0.88
TVP23A-202ENST00000456096 SPAG11AQ6PDA7 123 aa9.54□□□□□ -0.88
TVP23A-202ENST00000456096 S100PP25815 95 aa9.53□□□□□ -0.88
TVP23A-202ENST00000456096 FABP9Q0Z7S8 132 aa9.53□□□□□ -0.88
TVP23A-202ENST00000456096 SPRR4Q96PI1 79 aa9.53□□□□□ -0.88
TVP23A-202ENST00000456096 A0A096LNJ9 63 aa9.52□□□□□ -0.89
TVP23A-202ENST00000456096 RHEBQ15382 184 aa9.51□□□□□ -0.89
TVP23A-202ENST00000456096 C11orf86A6NJI1 115 aa9.5□□□□□ -0.89
TVP23A-202ENST00000456096 SNAPINO95295 136 aa9.5□□□□□ -0.89
TVP23A-202ENST00000456096 COX19Q49B96 90 aa9.5□□□□□ -0.89
TVP23A-202ENST00000456096 C4orf48Q5BLP8 95 aa9.5□□□□□ -0.89
TVP23A-202ENST00000456096 FP248Q71RG6 208 aaPredicted RBP9.5□□□□□ -0.89
TVP23A-202ENST00000456096 LINC00158P58513 81 aa9.49□□□□□ -0.89
TVP23A-202ENST00000456096 SFTA2Q6UW10 78 aa9.49□□□□□ -0.89
TVP23A-202ENST00000456096 SVBPQ8N300 66 aa9.49□□□□□ -0.89
TVP23A-202ENST00000456096 URB1-AS1Q96HZ7 61 aa9.49□□□□□ -0.89
TVP23A-202ENST00000456096 TMEM170BQ5T4T1 132 aa9.48□□□□□ -0.89
TVP23A-202ENST00000456096 LINC00337Q8N6G1 96 aa9.48□□□□□ -0.89
TVP23A-202ENST00000456096 DAND5Q8N907 189 aa9.48□□□□□ -0.89
TVP23A-202ENST00000456096 A0A0U1RRA0 63 aa9.47□□□□□ -0.89
TVP23A-202ENST00000456096 HBDP02042 147 aa9.47□□□□□ -0.89
TVP23A-202ENST00000456096 APOC3P02656 99 aa9.47□□□□□ -0.89
TVP23A-202ENST00000456096 PMCHL1Q16048 86 aa9.47□□□□□ -0.89
TVP23A-202ENST00000456096 KRTAP13-3Q3SY46 172 aa9.47□□□□□ -0.89
TVP23A-202ENST00000456096 BAGE3Q86Y29 109 aa9.47□□□□□ -0.89
TVP23A-202ENST00000456096 Q8NBF4 154 aa9.47□□□□□ -0.89
TVP23A-202ENST00000456096 ZNF706Q9Y5V0 76 aaPredicted RBP9.47□□□□□ -0.89
TVP23A-202ENST00000456096 LINC00614P0C842 121 aa9.46□□□□□ -0.9
TVP23A-202ENST00000456096 C18orf32Q8TCD1 76 aa9.45□□□□□ -0.9
TVP23A-202ENST00000456096 RPS10P5Q9NQ39 176 aa9.45□□□□□ -0.9
TVP23A-202ENST00000456096 ASB16-AS1Q495Z4 193 aa9.44□□□□□ -0.9
TVP23A-202ENST00000456096 PRYO14603 147 aa9.43□□□□□ -0.9
TVP23A-202ENST00000456096 SMCR5Q8TEV8 140 aa9.43□□□□□ -0.9
TVP23A-202ENST00000456096 KRTAP4-1Q9BYQ7 146 aa9.42□□□□□ -0.9
TVP23A-202ENST00000456096 SPINK1P00995 79 aa9.41□□□□□ -0.9
TVP23A-202ENST00000456096 SMIM13P0DJ93 91 aa9.41□□□□□ -0.9
TVP23A-202ENST00000456096 SPRR1AP35321 89 aa9.41□□□□□ -0.9
TVP23A-202ENST00000456096 BOD1L2Q8IYS8 172 aa9.41□□□□□ -0.9
TVP23A-202ENST00000456096 CHTOPQ9Y3Y2 248 aaKnown RBP9.41□□□□□ -0.9
TVP23A-202ENST00000456096 TMEM223A0PJW6 202 aa9.4□□□□□ -0.9
TVP23A-202ENST00000456096 NCR3O14931 201 aa9.4□□□□□ -0.9
TVP23A-202ENST00000456096 ATP6V1G1O75348 118 aa9.4□□□□□ -0.9
TVP23A-202ENST00000456096 LINC01547P58512 204 aaPredicted RBP9.4□□□□□ -0.9
TVP23A-202ENST00000456096 SLC7A5P1Q8MH63 180 aa9.4□□□□□ -0.9
TVP23A-202ENST00000456096 KCNQ1DNQ9H478 68 aa9.4□□□□□ -0.9
TVP23A-202ENST00000456096 TRAPPC1Q9Y5R8 145 aa9.4□□□□□ -0.9
TVP23A-202ENST00000456096 KRTAP4-16G5E9R7 235 aaPredicted RBP9.39□□□□□ -0.91
TVP23A-202ENST00000456096 ETDCA0A1B0GVM5 59 aa9.38□□□□□ -0.91
TVP23A-202ENST00000456096 SEC61BP60468 96 aaKnown RBP9.38□□□□□ -0.91
TVP23A-202ENST00000456096 LINC00483Q53H64 154 aa9.38□□□□□ -0.91
TVP23A-202ENST00000456096 MIR7-3HGQ8N6C7 128 aa9.38□□□□□ -0.91
TVP23A-202ENST00000456096 MEIG1Q5JSS6 88 aa9.37□□□□□ -0.91
TVP23A-202ENST00000456096 GAGE2AQ6NT46 116 aa9.37□□□□□ -0.91
TVP23A-202ENST00000456096 TRBV10-3A0A0K0K1G6 114 aa9.36□□□□□ -0.91
TVP23A-202ENST00000456096 IGLV9-49A0A0B4J1Y8 123 aa9.34□□□□□ -0.91
TVP23A-202ENST00000456096 ERC2-IT1O76042 136 aa9.34□□□□□ -0.91
TVP23A-202ENST00000456096 MOBPQ13875 183 aa9.34□□□□□ -0.91
TVP23A-202ENST00000456096 TRAV12-1A0A0B4J245 112 aa9.33□□□□□ -0.92
TVP23A-202ENST00000456096 B5MCH6 92 aa9.33□□□□□ -0.92
TVP23A-202ENST00000456096 LCE2DQ5TA82 110 aaPredicted RBP9.33□□□□□ -0.92
TVP23A-202ENST00000456096 Q8N377 158 aa9.33□□□□□ -0.92
TVP23A-202ENST00000456096 NDUFA12Q9UI09 145 aa9.33□□□□□ -0.92
TVP23A-202ENST00000456096 HERV-K104P63124 156 aa9.32□□□□□ -0.92
TVP23A-202ENST00000456096 SSBP3-AS1Q7Z2R9 100 aa9.32□□□□□ -0.92
TVP23A-202ENST00000456096 IFI27L1Q96BM0 104 aa9.32□□□□□ -0.92
TVP23A-202ENST00000456096 RPS29P62273 56 aaKnown RBP9.31□□□□□ -0.92
TVP23A-202ENST00000456096 LINC00587B1AMM8 73 aa9.3□□□□□ -0.92
TVP23A-202ENST00000456096 S100A12P80511 92 aa9.3□□□□□ -0.92
TVP23A-202ENST00000456096 FAM19A2Q8N3H0 131 aa9.3□□□□□ -0.92
TVP23A-202ENST00000456096 FSIP2Q5CZC0 6907 aa9.3□□□□□ -0.92
TVP23A-202ENST00000456096 SLC25A20O43772 301 aa9.29□□□□□ -0.92
TVP23A-202ENST00000456096 Q9BRP9 147 aa9.29□□□□□ -0.92
TVP23A-202ENST00000456096 MAP1LC3CQ9BXW4 147 aa9.29□□□□□ -0.92
TVP23A-202ENST00000456096 MYMXA0A1B0GTQ4 84 aa9.28□□□□□ -0.92
TVP23A-202ENST00000456096 CHCHD1Q96BP2 118 aaKnown RBP9.28□□□□□ -0.92
TVP23A-202ENST00000456096 DDTP30046 118 aa9.27□□□□□ -0.93
TVP23A-202ENST00000456096 XP32Q5T750 250 aa9.27□□□□□ -0.93
TVP23A-202ENST00000456096 Q6ZRX8 168 aa9.26□□□□□ -0.93
TVP23A-202ENST00000456096 YPEL4Q96NS1 127 aa9.26□□□□□ -0.93
TVP23A-202ENST00000456096 LOC107984156A0A0G2JMH3 177 aa9.25□□□□□ -0.93
TVP23A-202ENST00000456096 TRBV10-2A0A0K0K1G8 114 aa9.25□□□□□ -0.93
TVP23A-202ENST00000456096 TSPEAR-AS2P59090 65 aa9.25□□□□□ -0.93
TVP23A-202ENST00000456096 ARL17AQ8IVW1 177 aa9.25□□□□□ -0.93
TVP23A-202ENST00000456096 S100A1P23297 94 aa9.24□□□□□ -0.93
TVP23A-202ENST00000456096 LCE2CQ5TA81 110 aa9.23□□□□□ -0.93
TVP23A-202ENST00000456096 CRCT1Q9UGL9 99 aa9.23□□□□□ -0.93
TVP23A-202ENST00000456096 H0Y8G0 127 aa9.22□□□□□ -0.93
TVP23A-202ENST00000456096 C9orf153Q5TBE3 101 aa9.22□□□□□ -0.93
TVP23A-202ENST00000456096 LEPROTO15243 131 aa9.21□□□□□ -0.94
TVP23A-202ENST00000456096 IGLV6-57P01721 117 aa9.21□□□□□ -0.94
TVP23A-202ENST00000456096 SPANXB1Q9NS25 103 aaPredicted RBP9.21□□□□□ -0.94
TVP23A-202ENST00000456096 S100A7L2Q5SY68 101 aa9.2□□□□□ -0.94
TVP23A-202ENST00000456096 HSBP1O75506 76 aa9.19□□□□□ -0.94
TVP23A-202ENST00000456096 MIEN1Q9BRT3 115 aa9.19□□□□□ -0.94
TVP23A-202ENST00000456096 TRAV23DV6A0A075B6W5 121 aa9.18□□□□□ -0.94
TVP23A-202ENST00000456096 COLCA2A8K830 154 aa9.18□□□□□ -0.94
TVP23A-202ENST00000456096 JOSD1Q15040 202 aaPredicted RBP9.18□□□□□ -0.94
TVP23A-202ENST00000456096 ST20-AS1Q8NBB2 130 aa9.18□□□□□ -0.94
TVP23A-202ENST00000456096 J3QQQ9 107 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms