RNA–Protein interactions for RNA: ENST00000455853.1

LINC00473-202, long intergenic non-protein coding RNA 473, humanhuman

TSL 1 (best)

Gene LINC00473, Length 1,822 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-202ENST00000455853 DEFB130AP0DP74 79 aa8.84□□□□□ -0.99
LINC00473-202ENST00000455853 WNK1Q9H4A3 2382 aa8.84□□□□□ -0.99
LINC00473-202ENST00000455853 ANK2Q01484 3957 aa8.83□□□□□ -1
LINC00473-202ENST00000455853 PDE6GP18545 87 aa8.83□□□□□ -1
LINC00473-202ENST00000455853 LOC110117498A0A087WWA1 95 aa8.82□□□□□ -1
LINC00473-202ENST00000455853 ZNF561-AS1K7EIQ3 104 aa8.82□□□□□ -1
LINC00473-202ENST00000455853 A0A087WVE0 104 aa8.82□□□□□ -1
LINC00473-202ENST00000455853 GHRHP01286 108 aa8.82□□□□□ -1
LINC00473-202ENST00000455853 LINC00575Q6W349 94 aa8.82□□□□□ -1
LINC00473-202ENST00000455853 CHCHD10Q8WYQ3 142 aaPredicted RBP8.82□□□□□ -1
LINC00473-202ENST00000455853 NOTCH3Q9UM47 2321 aa8.8□□□□□ -1
LINC00473-202ENST00000455853 FBN3Q75N90 2809 aa8.8□□□□□ -1
LINC00473-202ENST00000455853 RBM3P98179 157 aaKnown RBP8.8□□□□□ -1
LINC00473-202ENST00000455853 C6orf99Q4VX62 202 aa8.8□□□□□ -1
LINC00473-202ENST00000455853 C6orf223Q8N319 242 aa8.8□□□□□ -1
LINC00473-202ENST00000455853 REG3AQ06141 175 aa8.79□□□□□ -1
LINC00473-202ENST00000455853 LINC00269Q8N2A0 174 aa8.79□□□□□ -1
LINC00473-202ENST00000455853 DPH3Q96FX2 82 aa8.79□□□□□ -1
LINC00473-202ENST00000455853 X6R8D5 127 aa8.79□□□□□ -1
LINC00473-202ENST00000455853 C5orf47Q569G3 176 aa8.78□□□□□ -1
LINC00473-202ENST00000455853 Q6ZQT0 140 aa8.78□□□□□ -1
LINC00473-202ENST00000455853 FAM19A5Q7Z5A7 132 aaPredicted RBP8.78□□□□□ -1
LINC00473-202ENST00000455853 CLPSL2Q6UWE3 100 aa8.77□□□□□ -1
LINC00473-202ENST00000455853 A0A0J9YWU9 116 aa8.77□□□□□ -1.01
LINC00473-202ENST00000455853 LOC107984640A0A0U1RRK4 108 aa8.77□□□□□ -1.01
LINC00473-202ENST00000455853 ANGP03950 147 aaKnown RBP8.77□□□□□ -1.01
LINC00473-202ENST00000455853 IGHV4-30-4P0DP06 118 aa8.77□□□□□ -1.01
LINC00473-202ENST00000455853 GVQW2A0A096LPI5 108 aaPredicted RBP8.76□□□□□ -1.01
LINC00473-202ENST00000455853 PRR3P79522 188 aaKnown RBP8.76□□□□□ -1.01
LINC00473-202ENST00000455853 IGLV6-57P01721 117 aa8.75□□□□□ -1.01
LINC00473-202ENST00000455853 C9orf66Q5T8R8 295 aa8.75□□□□□ -1.01
LINC00473-202ENST00000455853 ENHOQ6UWT2 76 aa8.75□□□□□ -1.01
LINC00473-202ENST00000455853 SPAG11BQ08648 103 aa8.75□□□□□ -1.01
LINC00473-202ENST00000455853 DSCR8Q96T75 97 aa8.75□□□□□ -1.01
LINC00473-202ENST00000455853 TENM1Q9UKZ4 2725 aa8.74□□□□□ -1.01
LINC00473-202ENST00000455853 TRAV7A0A075B6U4 112 aa8.74□□□□□ -1.01
LINC00473-202ENST00000455853 LAMTOR3Q9UHA4 124 aa8.74□□□□□ -1.01
LINC00473-202ENST00000455853 CXCL6P80162 114 aa8.73□□□□□ -1.01
LINC00473-202ENST00000455853 CYSTM1Q9H1C7 97 aa8.73□□□□□ -1.01
LINC00473-202ENST00000455853 TRAV23DV6A0A075B6W5 121 aa8.73□□□□□ -1.01
LINC00473-202ENST00000455853 TRBV7-6A0A0J9YX20 115 aa8.73□□□□□ -1.01
LINC00473-202ENST00000455853 LELP1Q5T871 98 aa8.73□□□□□ -1.01
LINC00473-202ENST00000455853 FAM19A1Q7Z5A9 133 aa8.73□□□□□ -1.01
LINC00473-202ENST00000455853 LINC00482Q8N8I6 264 aa8.73□□□□□ -1.01
LINC00473-202ENST00000455853 APOC4P55056 127 aa8.72□□□□□ -1.01
LINC00473-202ENST00000455853 DAD1P61803 113 aa8.72□□□□□ -1.01
LINC00473-202ENST00000455853 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.72□□□□□ -1.01
LINC00473-202ENST00000455853 A0A096LPF7 62 aa8.71□□□□□ -1.01
LINC00473-202ENST00000455853 C9orf116Q5BN46 136 aaPredicted RBP8.71□□□□□ -1.01
LINC00473-202ENST00000455853 DIRC1Q969H9 104 aa8.7□□□□□ -1.02
LINC00473-202ENST00000455853 IGLV10-54A0A075B6I4 117 aa8.7□□□□□ -1.02
LINC00473-202ENST00000455853 PRR34Q9NV39 138 aa8.7□□□□□ -1.02
LINC00473-202ENST00000455853 MIFP14174 115 aa8.69□□□□□ -1.02
LINC00473-202ENST00000455853 LINC01547P58512 204 aaPredicted RBP8.69□□□□□ -1.02
LINC00473-202ENST00000455853 UNQ6190/PRO20217Q6UXQ8 127 aa8.69□□□□□ -1.02
LINC00473-202ENST00000455853 Q6ZVQ6 151 aa8.69□□□□□ -1.02
LINC00473-202ENST00000455853 Q8NDZ9 215 aa8.69□□□□□ -1.02
LINC00473-202ENST00000455853 KRTAP10-3P60369 221 aa8.68□□□□□ -1.02
LINC00473-202ENST00000455853 Q6ZQY7 126 aa8.68□□□□□ -1.02
LINC00473-202ENST00000455853 WFDC9Q8NEX5 89 aa8.68□□□□□ -1.02
LINC00473-202ENST00000455853 FAM236DA0A1B0GTK5 79 aa8.67□□□□□ -1.02
LINC00473-202ENST00000455853 FAM236CP0DP71 79 aa8.67□□□□□ -1.02
LINC00473-202ENST00000455853 TRRAPQ9Y4A5 3859 aa8.66□□□□□ -1.02
LINC00473-202ENST00000455853 COX7BP24311 80 aa8.66□□□□□ -1.02
LINC00473-202ENST00000455853 C10orf25Q5T742 122 aa8.66□□□□□ -1.02
LINC00473-202ENST00000455853 C20orf197Q8N268 126 aa8.66□□□□□ -1.02
LINC00473-202ENST00000455853 TRBV7-4A0A0J9YYF1 115 aa8.66□□□□□ -1.02
LINC00473-202ENST00000455853 HAMPP81172 84 aa8.66□□□□□ -1.02
LINC00473-202ENST00000455853 KLKP1Q107X0 134 aa8.66□□□□□ -1.02
LINC00473-202ENST00000455853 NBEAL1Q6ZS30 2694 aa8.65□□□□□ -1.02
LINC00473-202ENST00000455853 NDUFC1O43677 76 aa8.65□□□□□ -1.02
LINC00473-202ENST00000455853 SPART-AS1P0CW21 52 aa8.65□□□□□ -1.02
LINC00473-202ENST00000455853 SERP1Q9Y6X1 66 aa8.65□□□□□ -1.02
LINC00473-202ENST00000455853 ELOF1P60002 83 aaKnown RBP8.64□□□□□ -1.03
LINC00473-202ENST00000455853 WIPF1O43516 503 aa8.64□□□□□ -1.03
LINC00473-202ENST00000455853 ZNF73O43830 326 aaPredicted RBP8.64□□□□□ -1.03
LINC00473-202ENST00000455853 F8WDY8 70 aa8.63□□□□□ -1.03
LINC00473-202ENST00000455853 DEFB135Q30KP9 77 aa8.63□□□□□ -1.03
LINC00473-202ENST00000455853 Q8NAQ8 132 aa8.63□□□□□ -1.03
LINC00473-202ENST00000455853 EPM2AB3EWF7 344 aa8.62□□□□□ -1.03
LINC00473-202ENST00000455853 ATP5EP56381 51 aaPredicted RBP8.62□□□□□ -1.03
LINC00473-202ENST00000455853 C6orf48Q9UBA6 75 aa8.62□□□□□ -1.03
LINC00473-202ENST00000455853 KLK12Q9UKR0 248 aa8.62□□□□□ -1.03
LINC00473-202ENST00000455853 M0R378 163 aa8.61□□□□□ -1.03
LINC00473-202ENST00000455853 EGFEM1PQ0D2K5 195 aa8.61□□□□□ -1.03
LINC00473-202ENST00000455853 Q8N3U1 123 aa8.61□□□□□ -1.03
LINC00473-202ENST00000455853 H7BZZ5 65 aa8.61□□□□□ -1.03
LINC00473-202ENST00000455853 OXTP01178 125 aa8.61□□□□□ -1.03
LINC00473-202ENST00000455853 MGAM2Q2M2H8 2515 aa8.6□□□□□ -1.03
LINC00473-202ENST00000455853 ERC2-IT1O76042 136 aa8.6□□□□□ -1.03
LINC00473-202ENST00000455853 H3BNG1 76 aa8.59□□□□□ -1.03
LINC00473-202ENST00000455853 M0R2N4 97 aa8.59□□□□□ -1.03
LINC00473-202ENST00000455853 VPREB1P12018 145 aa8.59□□□□□ -1.03
LINC00473-202ENST00000455853 Q5XG85 94 aa8.58□□□□□ -1.04
LINC00473-202ENST00000455853 CELA1Q9UNI1 258 aa8.58□□□□□ -1.04
LINC00473-202ENST00000455853 DEFB4AO15263 64 aa8.57□□□□□ -1.04
LINC00473-202ENST00000455853 CAMK2N2Q96S95 79 aa8.57□□□□□ -1.04
LINC00473-202ENST00000455853 TRAV10A0A0B4J240 114 aa8.57□□□□□ -1.04
LINC00473-202ENST00000455853 A0A1B0GW54 56 aa8.56□□□□□ -1.04
LINC00473-202ENST00000455853 LINC00528Q8N1L1 170 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms