RNA–Protein interactions for RNA: ENST00000455548.2

SMPD4-214, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-214ENST00000455548 RPL24P83731 157 aaKnown RBP9.88□□□□□ -0.83
SMPD4-214ENST00000455548 NDUFA12Q9UI09 145 aa9.88□□□□□ -0.83
SMPD4-214ENST00000455548 MYMXA0A1B0GTQ4 84 aa9.87□□□□□ -0.83
SMPD4-214ENST00000455548 GAGE10A6NGK3 116 aa9.87□□□□□ -0.83
SMPD4-214ENST00000455548 RPL37AP8A6NKH3 93 aa9.87□□□□□ -0.83
SMPD4-214ENST00000455548 LINC00587B1AMM8 73 aa9.87□□□□□ -0.83
SMPD4-214ENST00000455548 IGKCP01834 107 aa9.87□□□□□ -0.83
SMPD4-214ENST00000455548 VPREB1P12018 145 aa9.87□□□□□ -0.83
SMPD4-214ENST00000455548 HERVK_113P61574 105 aa9.87□□□□□ -0.83
SMPD4-214ENST00000455548 PLEKHB2Q96CS7 222 aa9.87□□□□□ -0.83
SMPD4-214ENST00000455548 LEPROTO15243 131 aa9.86□□□□□ -0.83
SMPD4-214ENST00000455548 ATP6V1G1O75348 118 aa9.86□□□□□ -0.83
SMPD4-214ENST00000455548 KRTAP10-8P60410 259 aa9.86□□□□□ -0.83
SMPD4-214ENST00000455548 PMCHL2Q9BQD1 86 aa9.86□□□□□ -0.83
SMPD4-214ENST00000455548 TNXBP22105 4242 aa9.85□□□□□ -0.83
SMPD4-214ENST00000455548 ZNF861PO60384 105 aa9.85□□□□□ -0.83
SMPD4-214ENST00000455548 BCE1O60756 84 aa9.85□□□□□ -0.83
SMPD4-214ENST00000455548 MEIG1Q5JSS6 88 aa9.85□□□□□ -0.83
SMPD4-214ENST00000455548 A0A0U1RRA0 63 aa9.84□□□□□ -0.83
SMPD4-214ENST00000455548 SMIM13P0DJ93 91 aa9.84□□□□□ -0.83
SMPD4-214ENST00000455548 J3QQQ9 107 aa9.83□□□□□ -0.84
SMPD4-214ENST00000455548 RPL28P46779 137 aaKnown RBP9.83□□□□□ -0.84
SMPD4-214ENST00000455548 SYS1-DBNDD2H3BUS1 97 aa9.82□□□□□ -0.84
SMPD4-214ENST00000455548 NMUP48645 174 aa9.82□□□□□ -0.84
SMPD4-214ENST00000455548 TSPEAR-AS2P59090 65 aa9.82□□□□□ -0.84
SMPD4-214ENST00000455548 COA6Q5JTJ3 125 aaKnown RBP9.82□□□□□ -0.84
SMPD4-214ENST00000455548 IGKV2-28A0A075B6P5 120 aa9.81□□□□□ -0.84
SMPD4-214ENST00000455548 IGKV2D-28P01615 120 aa9.81□□□□□ -0.84
SMPD4-214ENST00000455548 S100A1P23297 94 aa9.81□□□□□ -0.84
SMPD4-214ENST00000455548 MIR7-3HGQ8N6C7 128 aa9.81□□□□□ -0.84
SMPD4-214ENST00000455548 IGLV1-50A0A075B6I6 118 aa9.8□□□□□ -0.84
SMPD4-214ENST00000455548 LGALS3P17931 250 aaKnown RBP9.8□□□□□ -0.84
SMPD4-214ENST00000455548 PET117Q6UWS5 81 aa9.8□□□□□ -0.84
SMPD4-214ENST00000455548 Q8NDZ9 215 aa9.8□□□□□ -0.84
SMPD4-214ENST00000455548 LINC01545Q5VT33 79 aa9.79□□□□□ -0.84
SMPD4-214ENST00000455548 HMCN2Q8NDA2 5059 aa9.78□□□□□ -0.84
SMPD4-214ENST00000455548 M0R378 163 aa9.78□□□□□ -0.84
SMPD4-214ENST00000455548 KRTAP1-4P0C5Y4 121 aa9.78□□□□□ -0.84
SMPD4-214ENST00000455548 UBE2AP49459 152 aa9.78□□□□□ -0.84
SMPD4-214ENST00000455548 BOD1L2Q8IYS8 172 aa9.78□□□□□ -0.84
SMPD4-214ENST00000455548 E9PLD3 99 aa9.77□□□□□ -0.85
SMPD4-214ENST00000455548 PRR26Q8N8Z3 221 aa9.77□□□□□ -0.85
SMPD4-214ENST00000455548 TMEM126AQ9H061 195 aa9.76□□□□□ -0.85
SMPD4-214ENST00000455548 C3orf79P0CE67 100 aa9.75□□□□□ -0.85
SMPD4-214ENST00000455548 KRTAP13-1Q8IUC0 172 aa9.75□□□□□ -0.85
SMPD4-214ENST00000455548 TMEM238C9JI98 176 aa9.74□□□□□ -0.85
SMPD4-214ENST00000455548 RPL13AP40429 203 aaKnown RBP9.74□□□□□ -0.85
SMPD4-214ENST00000455548 IGKV2D-26A0A0A0MRZ7 120 aa9.73□□□□□ -0.85
SMPD4-214ENST00000455548 LOC107984156A0A0G2JMH3 177 aa9.73□□□□□ -0.85
SMPD4-214ENST00000455548 KRTDAPP60985 99 aa9.73□□□□□ -0.85
SMPD4-214ENST00000455548 FAM19A1Q7Z5A9 133 aa9.73□□□□□ -0.85
SMPD4-214ENST00000455548 ARL17AQ8IVW1 177 aa9.73□□□□□ -0.85
SMPD4-214ENST00000455548 DAND5Q8N907 189 aa9.72□□□□□ -0.85
SMPD4-214ENST00000455548 C20orf202A1L168 122 aa9.71□□□□□ -0.86
SMPD4-214ENST00000455548 NCR3O14931 201 aa9.71□□□□□ -0.86
SMPD4-214ENST00000455548 MIEN1Q9BRT3 115 aa9.71□□□□□ -0.86
SMPD4-214ENST00000455548 A0A0J9YXY3 114 aa9.7□□□□□ -0.86
SMPD4-214ENST00000455548 PRYO14603 147 aa9.7□□□□□ -0.86
SMPD4-214ENST00000455548 PRLHP81277 87 aa9.7□□□□□ -0.86
SMPD4-214ENST00000455548 TRBV10-2A0A0K0K1G8 114 aa9.68□□□□□ -0.86
SMPD4-214ENST00000455548 AKR1D1P51857 326 aa9.68□□□□□ -0.86
SMPD4-214ENST00000455548 KCNQ1DNQ9H478 68 aa9.68□□□□□ -0.86
SMPD4-214ENST00000455548 CRYGAP11844 174 aa9.67□□□□□ -0.86
SMPD4-214ENST00000455548 S100A12P80511 92 aa9.67□□□□□ -0.86
SMPD4-214ENST00000455548 SPANXB1Q9NS25 103 aaPredicted RBP9.67□□□□□ -0.86
SMPD4-214ENST00000455548 TRBV10-3A0A0K0K1G6 114 aa9.66□□□□□ -0.86
SMPD4-214ENST00000455548 TIMM17BO60830 172 aa9.66□□□□□ -0.86
SMPD4-214ENST00000455548 NDUFC2O95298 119 aa9.66□□□□□ -0.86
SMPD4-214ENST00000455548 ZNF815PA8K554 130 aa9.65□□□□□ -0.86
SMPD4-214ENST00000455548 FAM229BQ4G0N7 80 aa9.65□□□□□ -0.86
SMPD4-214ENST00000455548 ADAMTSL4-AS1Q5T5F5 129 aa9.65□□□□□ -0.86
SMPD4-214ENST00000455548 LINC00337Q8N6G1 96 aa9.65□□□□□ -0.86
SMPD4-214ENST00000455548 ETDCA0A1B0GVM5 59 aa9.64□□□□□ -0.87
SMPD4-214ENST00000455548 DDTP30046 118 aa9.64□□□□□ -0.87
SMPD4-214ENST00000455548 SPRR1AP35321 89 aa9.64□□□□□ -0.87
SMPD4-214ENST00000455548 HIGD2AQ9BW72 106 aa9.64□□□□□ -0.87
SMPD4-214ENST00000455548 A0A087X002 238 aa9.63□□□□□ -0.87
SMPD4-214ENST00000455548 S100A2P29034 98 aa9.63□□□□□ -0.87
SMPD4-214ENST00000455548 SOSTDC1Q6X4U4 206 aa9.63□□□□□ -0.87
SMPD4-214ENST00000455548 HIST3H2BBQ8N257 126 aa9.63□□□□□ -0.87
SMPD4-214ENST00000455548 NPC2P61916 151 aa9.62□□□□□ -0.87
SMPD4-214ENST00000455548 LITAFQ99732 161 aa9.62□□□□□ -0.87
SMPD4-214ENST00000455548 ANAPC11Q9NYG5 84 aa9.62□□□□□ -0.87
SMPD4-214ENST00000455548 KRTAP4-16G5E9R7 235 aaPredicted RBP9.61□□□□□ -0.87
SMPD4-214ENST00000455548 S100A6P06703 90 aa9.61□□□□□ -0.87
SMPD4-214ENST00000455548 S100A7L2Q5SY68 101 aa9.61□□□□□ -0.87
SMPD4-214ENST00000455548 TYMSOSQ8TAI1 123 aa9.61□□□□□ -0.87
SMPD4-214ENST00000455548 EIF4EBP3O60516 100 aaPredicted RBP9.6□□□□□ -0.87
SMPD4-214ENST00000455548 ATOH7Q8N100 152 aa9.6□□□□□ -0.87
SMPD4-214ENST00000455548 LINC00308Q8TCZ7 52 aa9.6□□□□□ -0.87
SMPD4-214ENST00000455548 HIST1H2BLQ99880 126 aa9.6□□□□□ -0.87
SMPD4-214ENST00000455548 TTTY13Q9BZ97 58 aa9.6□□□□□ -0.87
SMPD4-214ENST00000455548 IGLV6-57P01721 117 aa9.59□□□□□ -0.87
SMPD4-214ENST00000455548 ANKRD39Q53RE8 183 aa9.59□□□□□ -0.87
SMPD4-214ENST00000455548 SPANXCQ9NY87 97 aa9.59□□□□□ -0.87
SMPD4-214ENST00000455548 ZNF706Q9Y5V0 76 aaPredicted RBP9.59□□□□□ -0.87
SMPD4-214ENST00000455548 SNRPEP62304 92 aaKnown RBP9.58□□□□□ -0.88
SMPD4-214ENST00000455548 KRTAP13-2Q52LG2 175 aa9.58□□□□□ -0.88
SMPD4-214ENST00000455548 SCGB1D4Q6XE38 83 aa9.58□□□□□ -0.88
SMPD4-214ENST00000455548 CBY1Q9Y3M2 126 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms