RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 ZNF706Q9Y5V0 76 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P4-201ENST00000455362 STARD9Q9P2P6 4700 aa3.44□□□□□ -1.86
HMGB1P4-201ENST00000455362 DNAH1Q9P2D7 4330 aa3.44□□□□□ -1.86
HMGB1P4-201ENST00000455362 LYSTQ99698 3801 aa3.43□□□□□ -1.86
HMGB1P4-201ENST00000455362 IGLV4-69A0A075B6H9 119 aa3.43□□□□□ -1.86
HMGB1P4-201ENST00000455362 C11orf86A6NJI1 115 aa3.43□□□□□ -1.86
HMGB1P4-201ENST00000455362 IGKCP01834 107 aa3.43□□□□□ -1.86
HMGB1P4-201ENST00000455362 PLNP26678 52 aa3.43□□□□□ -1.86
HMGB1P4-201ENST00000455362 UBE2D1P51668 147 aa3.43□□□□□ -1.86
HMGB1P4-201ENST00000455362 FAM19A3Q7Z5A8 133 aa3.43□□□□□ -1.86
HMGB1P4-201ENST00000455362 VAMP8Q9BV40 100 aa3.43□□□□□ -1.86
HMGB1P4-201ENST00000455362 APLNQ9ULZ1 77 aa3.43□□□□□ -1.86
HMGB1P4-201ENST00000455362 PKIGQ9Y2B9 76 aa3.43□□□□□ -1.86
HMGB1P4-201ENST00000455362 IGLC3P0DOY3 106 aa3.42□□□□□ -1.86
HMGB1P4-201ENST00000455362 TCTAP57738 103 aa3.42□□□□□ -1.86
HMGB1P4-201ENST00000455362 HSD52Q0P140 79 aa3.42□□□□□ -1.86
HMGB1P4-201ENST00000455362 OR13C6PQ8NH95 151 aa3.42□□□□□ -1.86
HMGB1P4-201ENST00000455362 NAA38Q9BRA0 125 aaKnown RBP3.42□□□□□ -1.86
HMGB1P4-201ENST00000455362 KLK5Q9Y337 293 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P4-201ENST00000455362 LINC00588Q9Y4M8 146 aa3.42□□□□□ -1.86
HMGB1P4-201ENST00000455362 DNAH6Q9C0G6 4158 aa3.41□□□□□ -1.86
HMGB1P4-201ENST00000455362 TRAV13-1A0A0B4J241 112 aa3.41□□□□□ -1.86
HMGB1P4-201ENST00000455362 LINC00959A0A1B0GUT2 108 aa3.41□□□□□ -1.86
HMGB1P4-201ENST00000455362 NUPR2A6NF83 97 aa3.41□□□□□ -1.86
HMGB1P4-201ENST00000455362 ANGP03950 147 aaKnown RBP3.41□□□□□ -1.86
HMGB1P4-201ENST00000455362 CCL18P55774 89 aa3.41□□□□□ -1.86
HMGB1P4-201ENST00000455362 SEC11AP67812 179 aa3.41□□□□□ -1.86
HMGB1P4-201ENST00000455362 COX6A2Q02221 97 aa3.41□□□□□ -1.86
HMGB1P4-201ENST00000455362 SPATA45Q537H7 98 aa3.41□□□□□ -1.86
HMGB1P4-201ENST00000455362 Q6ZRU5 148 aa3.41□□□□□ -1.86
HMGB1P4-201ENST00000455362 WFDC10BQ8IUB3 73 aa3.41□□□□□ -1.86
HMGB1P4-201ENST00000455362 LINC00269Q8N2A0 174 aa3.41□□□□□ -1.86
HMGB1P4-201ENST00000455362 MRPS16Q9Y3D3 137 aaKnown RBP3.41□□□□□ -1.86
HMGB1P4-201ENST00000455362 IGKV3OR2-268A0A0C4DH90 116 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 KRTAP16-1A8MUX0 517 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 IGHV3-30P01768 117 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 IGHV3-33P01772 117 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 DNAH10OSP0CZ25 163 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 IGHV3-30-3P0DP02 117 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 IGHV3-30-5P0DP03 117 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 ZNF22P17026 224 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 HERVK_113P63121 156 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 LINC01556Q5JQF7 62 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 TMEM170BQ5T4T1 132 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 ENHOQ6UWT2 76 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 TYMSOSQ8TAI1 123 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 UPK3BQ9BT76 320 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 PRR34Q9NV39 138 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 CDKN2A-AS1Q9UH64 79 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 KLK12Q9UKR0 248 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 IGKV2D-26A0A0A0MRZ7 120 aa3.39□□□□□ -1.87
HMGB1P4-201ENST00000455362 TMEM223A0PJW6 202 aa3.39□□□□□ -1.87
HMGB1P4-201ENST00000455362 CCDC179H3BU77 68 aa3.39□□□□□ -1.87
HMGB1P4-201ENST00000455362 SS18Q15532 418 aa3.39□□□□□ -1.87
HMGB1P4-201ENST00000455362 ZFAND6Q6FIF0 208 aa3.39□□□□□ -1.87
HMGB1P4-201ENST00000455362 CLPSL2Q6UWE3 100 aa3.39□□□□□ -1.87
HMGB1P4-201ENST00000455362 MUC7Q8TAX7 377 aa3.39□□□□□ -1.87
HMGB1P4-201ENST00000455362 UBE2WQ96B02 151 aa3.39□□□□□ -1.87
HMGB1P4-201ENST00000455362 ALMS1Q8TCU4 4167 aa3.39□□□□□ -1.87
HMGB1P4-201ENST00000455362 IGLV10-54A0A075B6I4 117 aa3.38□□□□□ -1.87
HMGB1P4-201ENST00000455362 H3BRM9 83 aa3.38□□□□□ -1.87
HMGB1P4-201ENST00000455362 SPINK8P0C7L1 97 aa3.38□□□□□ -1.87
HMGB1P4-201ENST00000455362 COX8AP10176 69 aa3.38□□□□□ -1.87
HMGB1P4-201ENST00000455362 XCL1P47992 114 aa3.38□□□□□ -1.87
HMGB1P4-201ENST00000455362 HINT1P49773 126 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P4-201ENST00000455362 C9orf129Q5T035 196 aaKnown RBP3.38□□□□□ -1.87
HMGB1P4-201ENST00000455362 SLC25A34Q6PIV7 304 aa3.38□□□□□ -1.87
HMGB1P4-201ENST00000455362 C5orf38Q86SI9 138 aa3.38□□□□□ -1.87
HMGB1P4-201ENST00000455362 PCP2Q8IVA1 136 aa3.38□□□□□ -1.87
HMGB1P4-201ENST00000455362 SND1-IT1Q9HBX3 110 aa3.38□□□□□ -1.87
HMGB1P4-201ENST00000455362 UQCR10Q9UDW1 63 aa3.38□□□□□ -1.87
HMGB1P4-201ENST00000455362 DNAH10Q8IVF4 4471 aa3.38□□□□□ -1.87
HMGB1P4-201ENST00000455362 KMT2AQ03164 3969 aa3.37□□□□□ -1.87
HMGB1P4-201ENST00000455362 IGHV3-64A0A075B6Q5 118 aa3.37□□□□□ -1.87
HMGB1P4-201ENST00000455362 IGHV1-58A0A0C4DH39 117 aa3.37□□□□□ -1.87
HMGB1P4-201ENST00000455362 IBA57-AS1B1ANH7 110 aa3.37□□□□□ -1.87
HMGB1P4-201ENST00000455362 J3QQQ9 107 aa3.37□□□□□ -1.87
HMGB1P4-201ENST00000455362 LEPROTO15243 131 aa3.37□□□□□ -1.87
HMGB1P4-201ENST00000455362 TSPEAR-AS2P59090 65 aa3.37□□□□□ -1.87
HMGB1P4-201ENST00000455362 MIAQ16674 131 aa3.37□□□□□ -1.87
HMGB1P4-201ENST00000455362 KRTAP26-1Q6PEX3 210 aa3.37□□□□□ -1.87
HMGB1P4-201ENST00000455362 UBE2DNLQ8IWF7 75 aa3.37□□□□□ -1.87
HMGB1P4-201ENST00000455362 PLEKHB2Q96CS7 222 aa3.37□□□□□ -1.87
HMGB1P4-201ENST00000455362 TTTY13Q9BZ97 58 aa3.37□□□□□ -1.87
HMGB1P4-201ENST00000455362 C8orf17Q9NRJ1 99 aa3.37□□□□□ -1.87
HMGB1P4-201ENST00000455362 DNAH2Q9P225 4427 aa3.37□□□□□ -1.87
HMGB1P4-201ENST00000455362 FAM236DA0A1B0GTK5 79 aa3.36□□□□□ -1.87
HMGB1P4-201ENST00000455362 MYMXA0A1B0GTQ4 84 aa3.36□□□□□ -1.87
HMGB1P4-201ENST00000455362 FAM168BA1KXE4 195 aa3.36□□□□□ -1.87
HMGB1P4-201ENST00000455362 K7EP34 96 aa3.36□□□□□ -1.87
HMGB1P4-201ENST00000455362 COX7A2LO14548 114 aa3.36□□□□□ -1.87
HMGB1P4-201ENST00000455362 BPY2O14599 106 aa3.36□□□□□ -1.87
HMGB1P4-201ENST00000455362 CRPP02741 224 aa3.36□□□□□ -1.87
HMGB1P4-201ENST00000455362 FAM236CP0DP71 79 aa3.36□□□□□ -1.87
HMGB1P4-201ENST00000455362 C10orf126Q8N4M7 172 aa3.36□□□□□ -1.87
HMGB1P4-201ENST00000455362 TP73-AS1Q9UF72 201 aa3.36□□□□□ -1.87
HMGB1P4-201ENST00000455362 LOC107984640A0A0U1RRK4 108 aa3.35□□□□□ -1.87
HMGB1P4-201ENST00000455362 A0A1B0GVX0 72 aa3.35□□□□□ -1.87
HMGB1P4-201ENST00000455362 ZNF815PA8K554 130 aa3.35□□□□□ -1.87
HMGB1P4-201ENST00000455362 C3orf84H3BNL1 204 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms