RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 TP73-AS1Q9UF72 201 aa6.89□□□□□ -1.31
HDAC9-217ENST00000455069 HSPB8Q9UJY1 196 aa6.89□□□□□ -1.31
HDAC9-217ENST00000455069 PLA2G2DQ9UNK4 145 aa6.89□□□□□ -1.31
HDAC9-217ENST00000455069 TNXBP22105 4242 aa6.89□□□□□ -1.31
HDAC9-217ENST00000455069 IGLV5-37A0A075B6J1 123 aa6.88□□□□□ -1.31
HDAC9-217ENST00000455069 LINC01600Q96MT4 127 aa6.88□□□□□ -1.31
HDAC9-217ENST00000455069 SND1-IT1Q9HBX3 110 aa6.88□□□□□ -1.31
HDAC9-217ENST00000455069 COX17Q14061 63 aa6.87□□□□□ -1.31
HDAC9-217ENST00000455069 SFTA2Q6UW10 78 aa6.87□□□□□ -1.31
HDAC9-217ENST00000455069 VPREB1P12018 145 aa6.86□□□□□ -1.31
HDAC9-217ENST00000455069 PLNP26678 52 aa6.86□□□□□ -1.31
HDAC9-217ENST00000455069 LINC00167Q96N53 147 aa6.86□□□□□ -1.31
HDAC9-217ENST00000455069 A0A0U1RRA0 63 aa6.85□□□□□ -1.31
HDAC9-217ENST00000455069 GAGE10A6NGK3 116 aa6.85□□□□□ -1.31
HDAC9-217ENST00000455069 RPL37AP8A6NKH3 93 aa6.85□□□□□ -1.31
HDAC9-217ENST00000455069 DPM2O94777 84 aa6.85□□□□□ -1.31
HDAC9-217ENST00000455069 IGKCP01834 107 aa6.85□□□□□ -1.31
HDAC9-217ENST00000455069 LBHQ53QV2 105 aaPredicted RBP6.85□□□□□ -1.31
HDAC9-217ENST00000455069 COA6Q5JTJ3 125 aaKnown RBP6.85□□□□□ -1.31
HDAC9-217ENST00000455069 REG3GQ6UW15 175 aa6.85□□□□□ -1.31
HDAC9-217ENST00000455069 MAP1LC3CQ9BXW4 147 aa6.85□□□□□ -1.31
HDAC9-217ENST00000455069 H0Y9J4 135 aa6.84□□□□□ -1.31
HDAC9-217ENST00000455069 SYS1-DBNDD2H3BUS1 97 aa6.84□□□□□ -1.31
HDAC9-217ENST00000455069 LEPROTO15243 131 aa6.84□□□□□ -1.31
HDAC9-217ENST00000455069 ATP6V1G1O75348 118 aa6.84□□□□□ -1.31
HDAC9-217ENST00000455069 SMIM13P0DJ93 91 aa6.84□□□□□ -1.31
HDAC9-217ENST00000455069 NDUFA12Q9UI09 145 aa6.84□□□□□ -1.31
HDAC9-217ENST00000455069 LINC00158P58513 81 aa6.83□□□□□ -1.32
HDAC9-217ENST00000455069 KRTAP10-8P60410 259 aa6.83□□□□□ -1.32
HDAC9-217ENST00000455069 NKAPP1Q8N9T2 125 aa6.83□□□□□ -1.32
HDAC9-217ENST00000455069 DIRC1Q969H9 104 aa6.83□□□□□ -1.32
HDAC9-217ENST00000455069 J3QQQ9 107 aa6.82□□□□□ -1.32
HDAC9-217ENST00000455069 KRTAP1-4P0C5Y4 121 aa6.82□□□□□ -1.32
HDAC9-217ENST00000455069 HERV-K104P63124 156 aa6.82□□□□□ -1.32
HDAC9-217ENST00000455069 IGKV2-28A0A075B6P5 120 aa6.81□□□□□ -1.32
HDAC9-217ENST00000455069 IGKV2D-28P01615 120 aa6.81□□□□□ -1.32
HDAC9-217ENST00000455069 C3orf79P0CE67 100 aa6.81□□□□□ -1.32
HDAC9-217ENST00000455069 S100A1P23297 94 aa6.81□□□□□ -1.32
HDAC9-217ENST00000455069 MEIG1Q5JSS6 88 aa6.81□□□□□ -1.32
HDAC9-217ENST00000455069 LINC01545Q5VT33 79 aa6.81□□□□□ -1.32
HDAC9-217ENST00000455069 PLEKHB2Q96CS7 222 aa6.81□□□□□ -1.32
HDAC9-217ENST00000455069 IGLV1-50A0A075B6I6 118 aa6.8□□□□□ -1.32
HDAC9-217ENST00000455069 MYMXA0A1B0GTQ4 84 aa6.8□□□□□ -1.32
HDAC9-217ENST00000455069 ZNF861PO60384 105 aa6.8□□□□□ -1.32
HDAC9-217ENST00000455069 BCE1O60756 84 aa6.8□□□□□ -1.32
HDAC9-217ENST00000455069 HERVK_113P61574 105 aa6.8□□□□□ -1.32
HDAC9-217ENST00000455069 KRTAP13-1Q8IUC0 172 aa6.8□□□□□ -1.32
HDAC9-217ENST00000455069 MIR7-3HGQ8N6C7 128 aa6.8□□□□□ -1.32
HDAC9-217ENST00000455069 E9PLD3 99 aa6.79□□□□□ -1.32
HDAC9-217ENST00000455069 RPL24P83731 157 aaKnown RBP6.79□□□□□ -1.32
HDAC9-217ENST00000455069 DAND5Q8N907 189 aa6.79□□□□□ -1.32
HDAC9-217ENST00000455069 LRP2P98164 4655 aa6.79□□□□□ -1.32
HDAC9-217ENST00000455069 TMEM238C9JI98 176 aa6.78□□□□□ -1.32
HDAC9-217ENST00000455069 LGALS3P17931 250 aaKnown RBP6.78□□□□□ -1.32
HDAC9-217ENST00000455069 PET117Q6UWS5 81 aa6.78□□□□□ -1.32
HDAC9-217ENST00000455069 PRR26Q8N8Z3 221 aa6.78□□□□□ -1.32
HDAC9-217ENST00000455069 M0R378 163 aa6.77□□□□□ -1.33
HDAC9-217ENST00000455069 NMUP48645 174 aa6.77□□□□□ -1.33
HDAC9-217ENST00000455069 BOD1L2Q8IYS8 172 aa6.77□□□□□ -1.33
HDAC9-217ENST00000455069 IGKV2D-26A0A0A0MRZ7 120 aa6.76□□□□□ -1.33
HDAC9-217ENST00000455069 NCR3O14931 201 aa6.76□□□□□ -1.33
HDAC9-217ENST00000455069 KRTDAPP60985 99 aa6.76□□□□□ -1.33
HDAC9-217ENST00000455069 TMEM126AQ9H061 195 aa6.76□□□□□ -1.33
HDAC9-217ENST00000455069 LOC107984156A0A0G2JMH3 177 aa6.75□□□□□ -1.33
HDAC9-217ENST00000455069 A0A0J9YXY3 114 aa6.75□□□□□ -1.33
HDAC9-217ENST00000455069 LINC00587B1AMM8 73 aa6.75□□□□□ -1.33
HDAC9-217ENST00000455069 EIF4EBP3O60516 100 aaPredicted RBP6.75□□□□□ -1.33
HDAC9-217ENST00000455069 RPL28P46779 137 aaKnown RBP6.75□□□□□ -1.33
HDAC9-217ENST00000455069 ARL17AQ8IVW1 177 aa6.75□□□□□ -1.33
HDAC9-217ENST00000455069 TTTY13Q9BZ97 58 aa6.75□□□□□ -1.33
HDAC9-217ENST00000455069 PRLHP81277 87 aa6.74□□□□□ -1.33
HDAC9-217ENST00000455069 ADAMTSL4-AS1Q5T5F5 129 aa6.74□□□□□ -1.33
HDAC9-217ENST00000455069 SOSTDC1Q6X4U4 206 aa6.74□□□□□ -1.33
HDAC9-217ENST00000455069 UBE2AP49459 152 aa6.73□□□□□ -1.33
HDAC9-217ENST00000455069 HIST3H2BBQ8N257 126 aa6.73□□□□□ -1.33
HDAC9-217ENST00000455069 LITAFQ99732 161 aa6.73□□□□□ -1.33
HDAC9-217ENST00000455069 FAM19A1Q7Z5A9 133 aa6.72□□□□□ -1.33
HDAC9-217ENST00000455069 ATOH7Q8N100 152 aa6.72□□□□□ -1.33
HDAC9-217ENST00000455069 RNF213Q63HN8 5207 aa6.71□□□□□ -1.34
HDAC9-217ENST00000455069 A0A087X002 238 aa6.71□□□□□ -1.34
HDAC9-217ENST00000455069 TRBV10-3A0A0K0K1G6 114 aa6.71□□□□□ -1.34
HDAC9-217ENST00000455069 NPC2P61916 151 aa6.71□□□□□ -1.34
HDAC9-217ENST00000455069 ANKRD39Q53RE8 183 aa6.71□□□□□ -1.34
HDAC9-217ENST00000455069 HIST1H2BLQ99880 126 aa6.71□□□□□ -1.34
HDAC9-217ENST00000455069 ZNF815PA8K554 130 aa6.7□□□□□ -1.34
HDAC9-217ENST00000455069 KRTAP4-16G5E9R7 235 aaPredicted RBP6.7□□□□□ -1.34
HDAC9-217ENST00000455069 PRYO14603 147 aa6.7□□□□□ -1.34
HDAC9-217ENST00000455069 SPRR1AP35321 89 aa6.7□□□□□ -1.34
HDAC9-217ENST00000455069 KCNQ1DNQ9H478 68 aa6.7□□□□□ -1.34
HDAC9-217ENST00000455069 ANAPC11Q9NYG5 84 aa6.7□□□□□ -1.34
HDAC9-217ENST00000455069 C20orf202A1L168 122 aa6.69□□□□□ -1.34
HDAC9-217ENST00000455069 KRTAP4-8Q9BYQ9 185 aa6.69□□□□□ -1.34
HDAC9-217ENST00000455069 TRBV10-2A0A0K0K1G8 114 aa6.68□□□□□ -1.34
HDAC9-217ENST00000455069 TIMM17BO60830 172 aa6.68□□□□□ -1.34
HDAC9-217ENST00000455069 NDUFC2O95298 119 aa6.68□□□□□ -1.34
HDAC9-217ENST00000455069 MIEN1Q9BRT3 115 aa6.68□□□□□ -1.34
HDAC9-217ENST00000455069 SPANXB1Q9NS25 103 aaPredicted RBP6.68□□□□□ -1.34
HDAC9-217ENST00000455069 RPL13AP40429 203 aaKnown RBP6.67□□□□□ -1.34
HDAC9-217ENST00000455069 KRTAP13-2Q52LG2 175 aa6.67□□□□□ -1.34
HDAC9-217ENST00000455069 LINC00337Q8N6G1 96 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms