RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 KRTAP19-2Q3LHN2 52 aa12.16□□□□□ -0.46
TNFRSF25-208ENST00000453341 CBLN2Q8IUK8 224 aa12.15□□□□□ -0.46
TNFRSF25-208ENST00000453341 URB1-AS1Q96HZ7 61 aa12.15□□□□□ -0.46
TNFRSF25-208ENST00000453341 PDZD11Q5EBL8 140 aa12.14□□□□□ -0.47
TNFRSF25-208ENST00000453341 DAND5Q8N907 189 aa12.14□□□□□ -0.47
TNFRSF25-208ENST00000453341 C18orf32Q8TCD1 76 aa12.14□□□□□ -0.47
TNFRSF25-208ENST00000453341 VPREB1P12018 145 aa12.13□□□□□ -0.47
TNFRSF25-208ENST00000453341 MT1HP80294 61 aa12.13□□□□□ -0.47
TNFRSF25-208ENST00000453341 C4orf48Q5BLP8 95 aa12.13□□□□□ -0.47
TNFRSF25-208ENST00000453341 SPRR4Q96PI1 79 aa12.13□□□□□ -0.47
TNFRSF25-208ENST00000453341 CST9LQ9H4G1 147 aa12.13□□□□□ -0.47
TNFRSF25-208ENST00000453341 A0A096LNJ9 63 aa12.12□□□□□ -0.47
TNFRSF25-208ENST00000453341 Q8NBF4 154 aa12.12□□□□□ -0.47
TNFRSF25-208ENST00000453341 HIGD2AQ9BW72 106 aa12.12□□□□□ -0.47
TNFRSF25-208ENST00000453341 LINC01549A6NIU2 74 aa12.11□□□□□ -0.47
TNFRSF25-208ENST00000453341 PMCHL1Q16048 86 aa12.11□□□□□ -0.47
TNFRSF25-208ENST00000453341 YPEL4Q96NS1 127 aa12.11□□□□□ -0.47
TNFRSF25-208ENST00000453341 TINCRA0A1B0GVN0 87 aa12.1□□□□□ -0.47
TNFRSF25-208ENST00000453341 LINC00614P0C842 121 aa12.1□□□□□ -0.47
TNFRSF25-208ENST00000453341 PMVKQ15126 192 aa12.1□□□□□ -0.47
TNFRSF25-208ENST00000453341 IGLV5-45A0A087WSX0 123 aa12.09□□□□□ -0.47
TNFRSF25-208ENST00000453341 SPINK8P0C7L1 97 aa12.08□□□□□ -0.48
TNFRSF25-208ENST00000453341 Q8NDZ9 215 aa12.08□□□□□ -0.48
TNFRSF25-208ENST00000453341 XP32Q5T750 250 aa12.07□□□□□ -0.48
TNFRSF25-208ENST00000453341 PFN2P35080 140 aa12.06□□□□□ -0.48
TNFRSF25-208ENST00000453341 NDUFA6P56556 154 aa12.06□□□□□ -0.48
TNFRSF25-208ENST00000453341 SLC7A5P1Q8MH63 180 aa12.06□□□□□ -0.48
TNFRSF25-208ENST00000453341 SPINK1P00995 79 aa12.05□□□□□ -0.48
TNFRSF25-208ENST00000453341 HBDP02042 147 aa12.05□□□□□ -0.48
TNFRSF25-208ENST00000453341 CFC1BP0CG36 223 aa12.05□□□□□ -0.48
TNFRSF25-208ENST00000453341 LORP23490 312 aaPredicted RBP12.05□□□□□ -0.48
TNFRSF25-208ENST00000453341 SND1-IT1Q9HBX3 110 aa12.05□□□□□ -0.48
TNFRSF25-208ENST00000453341 ATP5LO75964 103 aa12.03□□□□□ -0.48
TNFRSF25-208ENST00000453341 IGLC3P0DOY3 106 aa12.01□□□□□ -0.49
TNFRSF25-208ENST00000453341 KRTAP10-6P60371 365 aaPredicted RBP12□□□□□ -0.49
TNFRSF25-208ENST00000453341 RPL24P83731 157 aaKnown RBP12□□□□□ -0.49
TNFRSF25-208ENST00000453341 Q8N377 158 aa12□□□□□ -0.49
TNFRSF25-208ENST00000453341 ZNF706Q9Y5V0 76 aaPredicted RBP12□□□□□ -0.49
TNFRSF25-208ENST00000453341 NDUFA12Q9UI09 145 aa11.99□□□□□ -0.49
TNFRSF25-208ENST00000453341 H3BRM9 83 aa11.98□□□□□ -0.49
TNFRSF25-208ENST00000453341 ZNF22P17026 224 aaPredicted RBP11.98□□□□□ -0.49
TNFRSF25-208ENST00000453341 BAGE3Q86Y29 109 aa11.97□□□□□ -0.49
TNFRSF25-208ENST00000453341 ERG28Q9UKR5 140 aa11.97□□□□□ -0.49
TNFRSF25-208ENST00000453341 C11orf86A6NJI1 115 aa11.95□□□□□ -0.5
TNFRSF25-208ENST00000453341 CHCHD1Q96BP2 118 aaKnown RBP11.95□□□□□ -0.5
TNFRSF25-208ENST00000453341 TRGC2P03986 189 aa11.94□□□□□ -0.5
TNFRSF25-208ENST00000453341 FAM19A2Q8N3H0 131 aa11.94□□□□□ -0.5
TNFRSF25-208ENST00000453341 IGLV5-39A0A0G2JS06 123 aa11.93□□□□□ -0.5
TNFRSF25-208ENST00000453341 RPS29P62273 56 aaKnown RBP11.92□□□□□ -0.5
TNFRSF25-208ENST00000453341 ZNF625Q96I27 306 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF25-208ENST00000453341 CHTOPQ9Y3Y2 248 aaKnown RBP11.92□□□□□ -0.5
TNFRSF25-208ENST00000453341 COX17Q14061 63 aa11.91□□□□□ -0.5
TNFRSF25-208ENST00000453341 LINC00483Q53H64 154 aa11.91□□□□□ -0.5
TNFRSF25-208ENST00000453341 TMEM170BQ5T4T1 132 aa11.91□□□□□ -0.5
TNFRSF25-208ENST00000453341 SMCR5Q8TEV8 140 aa11.91□□□□□ -0.5
TNFRSF25-208ENST00000453341 KRTAP9-7A8MTY7 169 aa11.9□□□□□ -0.5
TNFRSF25-208ENST00000453341 IFI27L1Q96BM0 104 aa11.9□□□□□ -0.5
TNFRSF25-208ENST00000453341 SLC25A20O43772 301 aa11.89□□□□□ -0.51
TNFRSF25-208ENST00000453341 MOBPQ13875 183 aa11.89□□□□□ -0.51
TNFRSF25-208ENST00000453341 FLGP20930 4061 aaPredicted RBP11.88□□□□□ -0.51
TNFRSF25-208ENST00000453341 HSBP1O75506 76 aa11.88□□□□□ -0.51
TNFRSF25-208ENST00000453341 PCOTHQ58A44 107 aa11.88□□□□□ -0.51
TNFRSF25-208ENST00000453341 IGLV9-49A0A0B4J1Y8 123 aa11.87□□□□□ -0.51
TNFRSF25-208ENST00000453341 COLCA2A8K830 154 aa11.87□□□□□ -0.51
TNFRSF25-208ENST00000453341 LINC00310P59036 64 aa11.87□□□□□ -0.51
TNFRSF25-208ENST00000453341 IGLV8-61A0A075B6I0 122 aa11.86□□□□□ -0.51
TNFRSF25-208ENST00000453341 TRAV12-1A0A0B4J245 112 aa11.86□□□□□ -0.51
TNFRSF25-208ENST00000453341 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.85□□□□□ -0.51
TNFRSF25-208ENST00000453341 PRYO14603 147 aa11.85□□□□□ -0.51
TNFRSF25-208ENST00000453341 SERF1AO75920 110 aa11.85□□□□□ -0.51
TNFRSF25-208ENST00000453341 SPRR1AP35321 89 aa11.85□□□□□ -0.51
TNFRSF25-208ENST00000453341 GAGE2AQ6NT46 116 aa11.85□□□□□ -0.51
TNFRSF25-208ENST00000453341 KRTAP4-16G5E9R7 235 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF25-208ENST00000453341 TMEM223A0PJW6 202 aa11.83□□□□□ -0.52
TNFRSF25-208ENST00000453341 H0Y8G0 127 aa11.83□□□□□ -0.52
TNFRSF25-208ENST00000453341 SSBP3-AS1Q7Z2R9 100 aa11.83□□□□□ -0.52
TNFRSF25-208ENST00000453341 KCNQ1DNQ9H478 68 aa11.8□□□□□ -0.52
TNFRSF25-208ENST00000453341 ERC2-IT1O76042 136 aa11.79□□□□□ -0.52
TNFRSF25-208ENST00000453341 LEPROTL1O95214 131 aa11.79□□□□□ -0.52
TNFRSF25-208ENST00000453341 ETDCA0A1B0GVM5 59 aa11.78□□□□□ -0.52
TNFRSF25-208ENST00000453341 M0R2T5 61 aa11.78□□□□□ -0.52
TNFRSF25-208ENST00000453341 LINC00158P58513 81 aa11.78□□□□□ -0.52
TNFRSF25-208ENST00000453341 A0A0U1RRA0 63 aa11.77□□□□□ -0.53
TNFRSF25-208ENST00000453341 FABP4P15090 132 aa11.77□□□□□ -0.53
TNFRSF25-208ENST00000453341 NCR3O14931 201 aa11.76□□□□□ -0.53
TNFRSF25-208ENST00000453341 SFTA2Q6UW10 78 aa11.75□□□□□ -0.53
TNFRSF25-208ENST00000453341 PMCHL2Q9BQD1 86 aa11.73□□□□□ -0.53
TNFRSF25-208ENST00000453341 SSPOA2VEC9 5147 aa11.73□□□□□ -0.53
TNFRSF25-208ENST00000453341 TRBV10-3A0A0K0K1G6 114 aa11.72□□□□□ -0.53
TNFRSF25-208ENST00000453341 B5MCH6 92 aa11.72□□□□□ -0.53
TNFRSF25-208ENST00000453341 BOD1L2Q8IYS8 172 aa11.72□□□□□ -0.53
TNFRSF25-208ENST00000453341 HSPB8Q9UJY1 196 aa11.72□□□□□ -0.53
TNFRSF25-208ENST00000453341 C9orf92A6NGG3 77 aa11.71□□□□□ -0.53
TNFRSF25-208ENST00000453341 SMIM13P0DJ93 91 aa11.71□□□□□ -0.53
TNFRSF25-208ENST00000453341 Q9BRP9 147 aa11.7□□□□□ -0.54
TNFRSF25-208ENST00000453341 TSPEAR-AS2P59090 65 aa11.69□□□□□ -0.54
TNFRSF25-208ENST00000453341 MEIG1Q5JSS6 88 aa11.69□□□□□ -0.54
TNFRSF25-208ENST00000453341 USH2AO75445 5202 aa11.68□□□□□ -0.54
TNFRSF25-208ENST00000453341 HIST1H2BKO60814 126 aa11.68□□□□□ -0.54
TNFRSF25-208ENST00000453341 HIST1H2BJP06899 126 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms