RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 A6NDN8 102 aa8.06□□□□□ -1.12
HLA-DPA1-244ENST00000453337 EIF4EBP3O60516 100 aaPredicted RBP8.06□□□□□ -1.12
HLA-DPA1-244ENST00000453337 NDUFC2O95298 119 aa8.06□□□□□ -1.12
HLA-DPA1-244ENST00000453337 LINC00474Q9P2X8 69 aa8.06□□□□□ -1.12
HLA-DPA1-244ENST00000453337 DNAH2Q9P225 4427 aa8.06□□□□□ -1.12
HLA-DPA1-244ENST00000453337 BATFQ16520 125 aa8.05□□□□□ -1.12
HLA-DPA1-244ENST00000453337 PLA2G2DQ9UNK4 145 aa8.05□□□□□ -1.12
HLA-DPA1-244ENST00000453337 SACSQ9NZJ4 4579 aa8.04□□□□□ -1.12
HLA-DPA1-244ENST00000453337 DNAH17Q9UFH2 4485 aa8.03□□□□□ -1.12
HLA-DPA1-244ENST00000453337 A0A096LNI7 61 aa8.03□□□□□ -1.12
HLA-DPA1-244ENST00000453337 CFC1BP0CG36 223 aa8.03□□□□□ -1.12
HLA-DPA1-244ENST00000453337 CFC1P0CG37 223 aa8.03□□□□□ -1.12
HLA-DPA1-244ENST00000453337 C9orf129Q5T035 196 aaKnown RBP8.03□□□□□ -1.12
HLA-DPA1-244ENST00000453337 SNHG12Q9BXW3 62 aa8.03□□□□□ -1.12
HLA-DPA1-244ENST00000453337 NHP2Q9NX24 153 aaKnown RBP8.03□□□□□ -1.12
HLA-DPA1-244ENST00000453337 IGKV2-24A0A0C4DH68 120 aa8.02□□□□□ -1.13
HLA-DPA1-244ENST00000453337 KRTAP10-2P60368 255 aa8.02□□□□□ -1.13
HLA-DPA1-244ENST00000453337 LINC01620Q4KN68 170 aa8.02□□□□□ -1.13
HLA-DPA1-244ENST00000453337 RAB37Q96AX2 223 aa8.02□□□□□ -1.13
HLA-DPA1-244ENST00000453337 DPH3Q96FX2 82 aa8.02□□□□□ -1.13
HLA-DPA1-244ENST00000453337 TRAV13-2A0A0B4J235 113 aa8.01□□□□□ -1.13
HLA-DPA1-244ENST00000453337 A0A0B4J2C4 111 aa8.01□□□□□ -1.13
HLA-DPA1-244ENST00000453337 TRBV10-2A0A0K0K1G8 114 aa8.01□□□□□ -1.13
HLA-DPA1-244ENST00000453337 A0A1B0GWB2 263 aa8.01□□□□□ -1.13
HLA-DPA1-244ENST00000453337 FUSP35637 526 aaKnown RBP eCLIP8.01□□□□□ -1.13
HLA-DPA1-244ENST00000453337 VPREB1P12018 145 aa8□□□□□ -1.13
HLA-DPA1-244ENST00000453337 PRR3P79522 188 aaKnown RBP8□□□□□ -1.13
HLA-DPA1-244ENST00000453337 PRO1854Q9UHT4 67 aa8□□□□□ -1.13
HLA-DPA1-244ENST00000453337 HYDINQ4G0P3 5121 aa7.99□□□□□ -1.13
HLA-DPA1-244ENST00000453337 IGKV2-28A0A075B6P5 120 aa7.99□□□□□ -1.13
HLA-DPA1-244ENST00000453337 M0R378 163 aa7.99□□□□□ -1.13
HLA-DPA1-244ENST00000453337 IGKV2D-28P01615 120 aa7.99□□□□□ -1.13
HLA-DPA1-244ENST00000453337 COL5A1-AS1Q5SY13 56 aa7.99□□□□□ -1.13
HLA-DPA1-244ENST00000453337 NKAPP1Q8N9T2 125 aa7.99□□□□□ -1.13
HLA-DPA1-244ENST00000453337 IGLV5-37A0A075B6J1 123 aa7.98□□□□□ -1.13
HLA-DPA1-244ENST00000453337 CHTF8P0CG12 524 aa7.98□□□□□ -1.13
HLA-DPA1-244ENST00000453337 LBHQ53QV2 105 aaPredicted RBP7.98□□□□□ -1.13
HLA-DPA1-244ENST00000453337 OR13C6PQ8NH95 151 aa7.98□□□□□ -1.13
HLA-DPA1-244ENST00000453337 FRAS1Q86XX4 4008 aa7.97□□□□□ -1.13
HLA-DPA1-244ENST00000453337 S100A7L2Q5SY68 101 aa7.97□□□□□ -1.13
HLA-DPA1-244ENST00000453337 SERTAD4-AS1Q5TG53 156 aa7.97□□□□□ -1.13
HLA-DPA1-244ENST00000453337 Q8NDZ9 215 aa7.97□□□□□ -1.13
HLA-DPA1-244ENST00000453337 TMEM126AQ9H061 195 aa7.97□□□□□ -1.13
HLA-DPA1-244ENST00000453337 A0A1B0GVY2 172 aa7.96□□□□□ -1.14
HLA-DPA1-244ENST00000453337 A0A1W2PNN7 141 aa7.96□□□□□ -1.14
HLA-DPA1-244ENST00000453337 FAM168BA1KXE4 195 aa7.96□□□□□ -1.14
HLA-DPA1-244ENST00000453337 NCR3O14931 201 aa7.96□□□□□ -1.14
HLA-DPA1-244ENST00000453337 LINC00337Q8N6G1 96 aa7.96□□□□□ -1.14
HLA-DPA1-244ENST00000453337 SPACA4Q8TDM5 124 aa7.96□□□□□ -1.14
HLA-DPA1-244ENST00000453337 CBY1Q9Y3M2 126 aa7.96□□□□□ -1.14
HLA-DPA1-244ENST00000453337 C22orf24Q9Y442 160 aa7.96□□□□□ -1.14
HLA-DPA1-244ENST00000453337 K7ERJ3 54 aa7.95□□□□□ -1.14
HLA-DPA1-244ENST00000453337 RPL13AP40429 203 aaKnown RBP7.95□□□□□ -1.14
HLA-DPA1-244ENST00000453337 FAM19A5Q7Z5A7 132 aaPredicted RBP7.95□□□□□ -1.14
HLA-DPA1-244ENST00000453337 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.95□□□□□ -1.14
HLA-DPA1-244ENST00000453337 MRPL55Q7Z7F7 128 aaKnown RBP7.94□□□□□ -1.14
HLA-DPA1-244ENST00000453337 A0A087WYN8 130 aa7.93□□□□□ -1.14
HLA-DPA1-244ENST00000453337 EPM2AB3EWF7 344 aa7.93□□□□□ -1.14
HLA-DPA1-244ENST00000453337 H7C2G1 150 aa7.93□□□□□ -1.14
HLA-DPA1-244ENST00000453337 PANO1I0J062 215 aa7.93□□□□□ -1.14
HLA-DPA1-244ENST00000453337 IGLV6-57P01721 117 aa7.93□□□□□ -1.14
HLA-DPA1-244ENST00000453337 KRTAP10-1P60331 282 aa7.93□□□□□ -1.14
HLA-DPA1-244ENST00000453337 KRTAP7-1Q8IUC3 87 aa7.93□□□□□ -1.14
HLA-DPA1-244ENST00000453337 LINC00167Q96N53 147 aa7.93□□□□□ -1.14
HLA-DPA1-244ENST00000453337 M0QXV9 152 aa7.92□□□□□ -1.14
HLA-DPA1-244ENST00000453337 TAX1BP3O14907 124 aa7.92□□□□□ -1.14
HLA-DPA1-244ENST00000453337 Q1RN00 199 aa7.92□□□□□ -1.14
HLA-DPA1-244ENST00000453337 C7orf33Q8WU49 177 aa7.92□□□□□ -1.14
HLA-DPA1-244ENST00000453337 PLAC8Q9NZF1 115 aa7.92□□□□□ -1.14
HLA-DPA1-244ENST00000453337 TRBV10-3A0A0K0K1G6 114 aa7.91□□□□□ -1.14
HLA-DPA1-244ENST00000453337 GAGE10A6NGK3 116 aa7.91□□□□□ -1.14
HLA-DPA1-244ENST00000453337 C9orf118A6NHY6 69 aa7.91□□□□□ -1.14
HLA-DPA1-244ENST00000453337 FAT2Q9NYQ8 4349 aa7.9□□□□□ -1.14
HLA-DPA1-244ENST00000453337 IGLV1-50A0A075B6I6 118 aa7.9□□□□□ -1.14
HLA-DPA1-244ENST00000453337 TSPAN13O95857 204 aa7.9□□□□□ -1.14
HLA-DPA1-244ENST00000453337 RPL28P46779 137 aaKnown RBP7.9□□□□□ -1.14
HLA-DPA1-244ENST00000453337 PSMB2P49721 201 aa7.9□□□□□ -1.14
HLA-DPA1-244ENST00000453337 Q6ZSA8 131 aa7.9□□□□□ -1.14
HLA-DPA1-244ENST00000453337 SMIM11BQ8TCY0 68 aa7.9□□□□□ -1.14
HLA-DPA1-244ENST00000453337 HECTD4Q9Y4D8 3996 aa7.9□□□□□ -1.15
HLA-DPA1-244ENST00000453337 KMT2CQ8NEZ4 4911 aaKnown RBP7.89□□□□□ -1.15
HLA-DPA1-244ENST00000453337 COX6CP09669 75 aa7.89□□□□□ -1.15
HLA-DPA1-244ENST00000453337 FAM30AQ9NZY2 134 aa7.89□□□□□ -1.15
HLA-DPA1-244ENST00000453337 PKD1P98161 4303 aa7.89□□□□□ -1.15
HLA-DPA1-244ENST00000453337 RPL37AP8A6NKH3 93 aa7.88□□□□□ -1.15
HLA-DPA1-244ENST00000453337 H3BUT2 72 aa7.88□□□□□ -1.15
HLA-DPA1-244ENST00000453337 VAMP3Q15836 100 aa7.88□□□□□ -1.15
HLA-DPA1-244ENST00000453337 PHF5AQ7RTV0 110 aaKnown RBP7.88□□□□□ -1.15
HLA-DPA1-244ENST00000453337 KCNQ1DNQ9H478 68 aa7.88□□□□□ -1.15
HLA-DPA1-244ENST00000453337 DNAH11Q96DT5 4516 aa7.88□□□□□ -1.15
HLA-DPA1-244ENST00000453337 TRAV23DV6A0A075B6W5 121 aa7.87□□□□□ -1.15
HLA-DPA1-244ENST00000453337 SCGB1C2P0DMR2 95 aa7.87□□□□□ -1.15
HLA-DPA1-244ENST00000453337 UBE2BP63146 152 aa7.87□□□□□ -1.15
HLA-DPA1-244ENST00000453337 RYR2Q92736 4967 aa7.87□□□□□ -1.15
HLA-DPA1-244ENST00000453337 PRYO14603 147 aa7.86□□□□□ -1.15
HLA-DPA1-244ENST00000453337 LYRM7Q5U5X0 104 aa7.86□□□□□ -1.15
HLA-DPA1-244ENST00000453337 CIRBP-AS1Q8TBR5 109 aa7.86□□□□□ -1.15
HLA-DPA1-244ENST00000453337 H0YGX0 51 aa7.85□□□□□ -1.15
HLA-DPA1-244ENST00000453337 TRIAP1O43715 76 aa7.85□□□□□ -1.15
HLA-DPA1-244ENST00000453337 ZNF73O43830 326 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms