RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 CTAG1AP78358 180 aa5.04□□□□□ -1.6
DEPDC1B-202ENST00000453022 PMVKQ15126 192 aa5.04□□□□□ -1.6
DEPDC1B-202ENST00000453022 PLEKHB2Q96CS7 222 aa5.04□□□□□ -1.6
DEPDC1B-202ENST00000453022 PPDPFQ9H3Y8 114 aa5.04□□□□□ -1.6
DEPDC1B-202ENST00000453022 LINC01549A6NIU2 74 aa5.03□□□□□ -1.6
DEPDC1B-202ENST00000453022 H3BRM9 83 aa5.03□□□□□ -1.6
DEPDC1B-202ENST00000453022 IGLC3P0DOY3 106 aa5.03□□□□□ -1.6
DEPDC1B-202ENST00000453022 ERG28Q9UKR5 140 aa5.03□□□□□ -1.6
DEPDC1B-202ENST00000453022 KRTAP4-8A0A0G2JLE6 195 aa5.02□□□□□ -1.61
DEPDC1B-202ENST00000453022 ZNF22P17026 224 aaPredicted RBP5.02□□□□□ -1.61
DEPDC1B-202ENST00000453022 CBLN2Q8IUK8 224 aa5.02□□□□□ -1.61
DEPDC1B-202ENST00000453022 TRAV9-1A0A075B6T8 112 aa5.01□□□□□ -1.61
DEPDC1B-202ENST00000453022 A0A096LNJ9 63 aa5.01□□□□□ -1.61
DEPDC1B-202ENST00000453022 RAB14P61106 215 aa5.01□□□□□ -1.61
DEPDC1B-202ENST00000453022 ZNF625Q96I27 306 aaPredicted RBP5.01□□□□□ -1.61
DEPDC1B-202ENST00000453022 SPRR4Q96PI1 79 aa5.01□□□□□ -1.61
DEPDC1B-202ENST00000453022 HIGD2AQ9BW72 106 aa5.01□□□□□ -1.61
DEPDC1B-202ENST00000453022 RPL24P83731 157 aaKnown RBP5□□□□□ -1.61
DEPDC1B-202ENST00000453022 COX17Q14061 63 aa5□□□□□ -1.61
DEPDC1B-202ENST00000453022 KRTAP13-3Q3SY46 172 aa5□□□□□ -1.61
DEPDC1B-202ENST00000453022 GNB1LQ9BYB4 327 aa5□□□□□ -1.61
DEPDC1B-202ENST00000453022 KRTAP4-1Q9BYQ7 146 aa5□□□□□ -1.61
DEPDC1B-202ENST00000453022 C9orf118A6NHY6 69 aa4.99□□□□□ -1.61
DEPDC1B-202ENST00000453022 SPAG11AQ6PDA7 123 aa4.99□□□□□ -1.61
DEPDC1B-202ENST00000453022 FP248Q71RG6 208 aaPredicted RBP4.99□□□□□ -1.61
DEPDC1B-202ENST00000453022 FA2HQ7L5A8 372 aa4.99□□□□□ -1.61
DEPDC1B-202ENST00000453022 ASB16-AS1Q495Z4 193 aa4.99□□□□□ -1.61
DEPDC1B-202ENST00000453022 DAND5Q8N907 189 aa4.99□□□□□ -1.61
DEPDC1B-202ENST00000453022 URB1-AS1Q96HZ7 61 aa4.99□□□□□ -1.61
DEPDC1B-202ENST00000453022 SMCO4Q9NRQ5 59 aa4.99□□□□□ -1.61
DEPDC1B-202ENST00000453022 C11orf86A6NJI1 115 aa4.98□□□□□ -1.61
DEPDC1B-202ENST00000453022 NDUFA6P56556 154 aa4.98□□□□□ -1.61
DEPDC1B-202ENST00000453022 Q8NBF4 154 aa4.98□□□□□ -1.61
DEPDC1B-202ENST00000453022 LINC00310P59036 64 aa4.97□□□□□ -1.61
DEPDC1B-202ENST00000453022 FSIP2Q5CZC0 6907 aa4.96□□□□□ -1.61
DEPDC1B-202ENST00000453022 TMEM218A2RU14 115 aa4.96□□□□□ -1.62
DEPDC1B-202ENST00000453022 FABP9Q0Z7S8 132 aa4.96□□□□□ -1.62
DEPDC1B-202ENST00000453022 PMCHL1Q16048 86 aa4.96□□□□□ -1.62
DEPDC1B-202ENST00000453022 CLLU1Q5K131 121 aa4.96□□□□□ -1.62
DEPDC1B-202ENST00000453022 S100PP25815 95 aa4.95□□□□□ -1.62
DEPDC1B-202ENST00000453022 SPRR1AP35321 89 aa4.95□□□□□ -1.62
DEPDC1B-202ENST00000453022 LINC00158P58513 81 aa4.95□□□□□ -1.62
DEPDC1B-202ENST00000453022 TMEM170BQ5T4T1 132 aa4.95□□□□□ -1.62
DEPDC1B-202ENST00000453022 SFTA2Q6UW10 78 aa4.95□□□□□ -1.62
DEPDC1B-202ENST00000453022 LINC00337Q8N6G1 96 aa4.95□□□□□ -1.62
DEPDC1B-202ENST00000453022 ZNF706Q9Y5V0 76 aaPredicted RBP4.95□□□□□ -1.62
DEPDC1B-202ENST00000453022 A0A0U1RRA0 63 aa4.95□□□□□ -1.62
DEPDC1B-202ENST00000453022 KRTAP4-16G5E9R7 235 aaPredicted RBP4.95□□□□□ -1.62
DEPDC1B-202ENST00000453022 PRYO14603 147 aa4.95□□□□□ -1.62
DEPDC1B-202ENST00000453022 HBDP02042 147 aa4.95□□□□□ -1.62
DEPDC1B-202ENST00000453022 C18orf32Q8TCD1 76 aa4.95□□□□□ -1.62
DEPDC1B-202ENST00000453022 NCR3O14931 201 aa4.94□□□□□ -1.62
DEPDC1B-202ENST00000453022 SPINK1P00995 79 aa4.94□□□□□ -1.62
DEPDC1B-202ENST00000453022 LINC01547P58512 204 aaPredicted RBP4.94□□□□□ -1.62
DEPDC1B-202ENST00000453022 COX19Q49B96 90 aa4.94□□□□□ -1.62
DEPDC1B-202ENST00000453022 LINC00483Q53H64 154 aa4.94□□□□□ -1.62
DEPDC1B-202ENST00000453022 UQCC3Q6UW78 93 aa4.94□□□□□ -1.62
DEPDC1B-202ENST00000453022 BAGE3Q86Y29 109 aa4.94□□□□□ -1.62
DEPDC1B-202ENST00000453022 SMCR5Q8TEV8 140 aa4.94□□□□□ -1.62
DEPDC1B-202ENST00000453022 LINC00614P0C842 121 aa4.93□□□□□ -1.62
DEPDC1B-202ENST00000453022 SMIM13P0DJ93 91 aa4.93□□□□□ -1.62
DEPDC1B-202ENST00000453022 SEC11CQ9BY50 192 aa4.93□□□□□ -1.62
DEPDC1B-202ENST00000453022 KCNQ1DNQ9H478 68 aa4.93□□□□□ -1.62
DEPDC1B-202ENST00000453022 TMEM223A0PJW6 202 aa4.92□□□□□ -1.62
DEPDC1B-202ENST00000453022 SEC61BP60468 96 aaKnown RBP4.92□□□□□ -1.62
DEPDC1B-202ENST00000453022 BOD1L2Q8IYS8 172 aa4.92□□□□□ -1.62
DEPDC1B-202ENST00000453022 Q8N377 158 aa4.92□□□□□ -1.62
DEPDC1B-202ENST00000453022 ETDCA0A1B0GVM5 59 aa4.91□□□□□ -1.62
DEPDC1B-202ENST00000453022 MOBPQ13875 183 aa4.91□□□□□ -1.62
DEPDC1B-202ENST00000453022 CHTOPQ9Y3Y2 248 aaKnown RBP4.91□□□□□ -1.62
DEPDC1B-202ENST00000453022 TRBV10-3A0A0K0K1G6 114 aa4.91□□□□□ -1.62
DEPDC1B-202ENST00000453022 ERC2-IT1O76042 136 aa4.91□□□□□ -1.62
DEPDC1B-202ENST00000453022 LCE1DQ5T752 114 aa4.91□□□□□ -1.62
DEPDC1B-202ENST00000453022 GAGE2AQ6NT46 116 aa4.91□□□□□ -1.62
DEPDC1B-202ENST00000453022 MIR7-3HGQ8N6C7 128 aa4.91□□□□□ -1.62
DEPDC1B-202ENST00000453022 IGLV9-49A0A0B4J1Y8 123 aa4.9□□□□□ -1.63
DEPDC1B-202ENST00000453022 B5MCH6 92 aa4.9□□□□□ -1.63
DEPDC1B-202ENST00000453022 RPS29P62273 56 aaKnown RBP4.9□□□□□ -1.63
DEPDC1B-202ENST00000453022 IFITM2Q01629 132 aa4.9□□□□□ -1.63
DEPDC1B-202ENST00000453022 CRCT1Q9UGL9 99 aa4.9□□□□□ -1.63
DEPDC1B-202ENST00000453022 TRAPPC1Q9Y5R8 145 aa4.9□□□□□ -1.63
DEPDC1B-202ENST00000453022 RHEBQ15382 184 aa4.89□□□□□ -1.63
DEPDC1B-202ENST00000453022 MEIG1Q5JSS6 88 aa4.89□□□□□ -1.63
DEPDC1B-202ENST00000453022 C10orf91Q5T1B1 145 aa4.89□□□□□ -1.63
DEPDC1B-202ENST00000453022 Q9BRP9 147 aa4.89□□□□□ -1.63
DEPDC1B-202ENST00000453022 RPS10P5Q9NQ39 176 aa4.89□□□□□ -1.63
DEPDC1B-202ENST00000453022 NDUFA12Q9UI09 145 aa4.89□□□□□ -1.63
DEPDC1B-202ENST00000453022 TRAV12-1A0A0B4J245 112 aa4.88□□□□□ -1.63
DEPDC1B-202ENST00000453022 KRTAP19-2Q3LHN2 52 aa4.88□□□□□ -1.63
DEPDC1B-202ENST00000453022 FAM19A2Q8N3H0 131 aa4.88□□□□□ -1.63
DEPDC1B-202ENST00000453022 ATP6V1G1O75348 118 aa4.87□□□□□ -1.63
DEPDC1B-202ENST00000453022 HERV-K104P63124 156 aa4.87□□□□□ -1.63
DEPDC1B-202ENST00000453022 SSBP3-AS1Q7Z2R9 100 aa4.87□□□□□ -1.63
DEPDC1B-202ENST00000453022 SLC25A20O43772 301 aa4.87□□□□□ -1.63
DEPDC1B-202ENST00000453022 TSPEAR-AS2P59090 65 aa4.87□□□□□ -1.63
DEPDC1B-202ENST00000453022 Q6ZRX8 168 aa4.87□□□□□ -1.63
DEPDC1B-202ENST00000453022 COMMD7Q86VX2 200 aa4.87□□□□□ -1.63
DEPDC1B-202ENST00000453022 IFI27L1Q96BM0 104 aa4.87□□□□□ -1.63
DEPDC1B-202ENST00000453022 DDTP30046 118 aa4.86□□□□□ -1.63
DEPDC1B-202ENST00000453022 KRTAP19-4Q3LI73 84 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms