RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 CTAG1AP78358 180 aa9.54□□□□□ -0.88
SGCE-208ENST00000450385 GAGE10A6NGK3 116 aa9.53□□□□□ -0.88
SGCE-208ENST00000450385 HERV-K104P63124 156 aa9.53□□□□□ -0.88
SGCE-208ENST00000450385 FAM229BQ4G0N7 80 aa9.53□□□□□ -0.88
SGCE-208ENST00000450385 LINC00158P58513 81 aa9.51□□□□□ -0.89
SGCE-208ENST00000450385 IGKV2-28A0A075B6P5 120 aa9.5□□□□□ -0.89
SGCE-208ENST00000450385 ATP6V1G1O75348 118 aa9.5□□□□□ -0.89
SGCE-208ENST00000450385 IGKV2D-28P01615 120 aa9.5□□□□□ -0.89
SGCE-208ENST00000450385 LEPROTL1O95214 131 aa9.49□□□□□ -0.89
SGCE-208ENST00000450385 CBLN2Q8IUK8 224 aa9.49□□□□□ -0.89
SGCE-208ENST00000450385 TYMSOSQ8TAI1 123 aa9.49□□□□□ -0.89
SGCE-208ENST00000450385 TMEM126AQ9H061 195 aa9.49□□□□□ -0.89
SGCE-208ENST00000450385 M0R378 163 aa9.48□□□□□ -0.89
SGCE-208ENST00000450385 TRGC2P03986 189 aa9.48□□□□□ -0.89
SGCE-208ENST00000450385 PLNP26678 52 aa9.48□□□□□ -0.89
SGCE-208ENST00000450385 MAP1LC3CQ9BXW4 147 aa9.48□□□□□ -0.89
SGCE-208ENST00000450385 HSPB8Q9UJY1 196 aa9.48□□□□□ -0.89
SGCE-208ENST00000450385 IGKV2D-26A0A0A0MRZ7 120 aa9.47□□□□□ -0.89
SGCE-208ENST00000450385 MYMXA0A1B0GTQ4 84 aa9.47□□□□□ -0.89
SGCE-208ENST00000450385 A0A087X002 238 aa9.46□□□□□ -0.9
SGCE-208ENST00000450385 FAM19A1Q7Z5A9 133 aa9.46□□□□□ -0.9
SGCE-208ENST00000450385 FAM19A2Q8N3H0 131 aa9.46□□□□□ -0.9
SGCE-208ENST00000450385 NDUFA12Q9UI09 145 aa9.45□□□□□ -0.9
SGCE-208ENST00000450385 SCO1O75880 301 aa9.44□□□□□ -0.9
SGCE-208ENST00000450385 MEIG1Q5JSS6 88 aa9.44□□□□□ -0.9
SGCE-208ENST00000450385 PLEKHB2Q96CS7 222 aa9.44□□□□□ -0.9
SGCE-208ENST00000450385 RNF213Q63HN8 5207 aa9.44□□□□□ -0.9
SGCE-208ENST00000450385 LOC107984156A0A0G2JMH3 177 aa9.43□□□□□ -0.9
SGCE-208ENST00000450385 SERF1AO75920 110 aa9.43□□□□□ -0.9
SGCE-208ENST00000450385 SMIM13P0DJ93 91 aa9.43□□□□□ -0.9
SGCE-208ENST00000450385 NMUP48645 174 aa9.43□□□□□ -0.9
SGCE-208ENST00000450385 ARL17AQ8IVW1 177 aa9.43□□□□□ -0.9
SGCE-208ENST00000450385 TMEM238C9JI98 176 aa9.42□□□□□ -0.9
SGCE-208ENST00000450385 LEPROTO15243 131 aa9.42□□□□□ -0.9
SGCE-208ENST00000450385 HERVK_113P61574 105 aa9.42□□□□□ -0.9
SGCE-208ENST00000450385 S100A12P80511 92 aa9.42□□□□□ -0.9
SGCE-208ENST00000450385 LPAP08519 4548 aa9.42□□□□□ -0.9
SGCE-208ENST00000450385 COLCA2A8K830 154 aa9.41□□□□□ -0.9
SGCE-208ENST00000450385 PRYO14603 147 aa9.41□□□□□ -0.9
SGCE-208ENST00000450385 PRR4Q16378 134 aa9.41□□□□□ -0.9
SGCE-208ENST00000450385 BOD1L2Q8IYS8 172 aa9.41□□□□□ -0.9
SGCE-208ENST00000450385 MIR7-3HGQ8N6C7 128 aa9.41□□□□□ -0.9
SGCE-208ENST00000450385 LINC00337Q8N6G1 96 aa9.41□□□□□ -0.9
SGCE-208ENST00000450385 Q8NDZ9 215 aa9.41□□□□□ -0.9
SGCE-208ENST00000450385 KCNQ1DNQ9H478 68 aa9.41□□□□□ -0.9
SGCE-208ENST00000450385 DPM2O94777 84 aa9.4□□□□□ -0.9
SGCE-208ENST00000450385 PRLHP81277 87 aa9.4□□□□□ -0.9
SGCE-208ENST00000450385 ZNF706Q9Y5V0 76 aaPredicted RBP9.4□□□□□ -0.9
SGCE-208ENST00000450385 A0A0U1RRA0 63 aa9.39□□□□□ -0.91
SGCE-208ENST00000450385 LINC00310P59036 64 aa9.39□□□□□ -0.91
SGCE-208ENST00000450385 KRTAP13-2Q52LG2 175 aa9.39□□□□□ -0.91
SGCE-208ENST00000450385 TRBV10-2A0A0K0K1G8 114 aa9.38□□□□□ -0.91
SGCE-208ENST00000450385 H0Y8G0 127 aa9.38□□□□□ -0.91
SGCE-208ENST00000450385 IGKCP01834 107 aa9.38□□□□□ -0.91
SGCE-208ENST00000450385 SPRR1AP35321 89 aa9.38□□□□□ -0.91
SGCE-208ENST00000450385 J3QQQ9 107 aa9.37□□□□□ -0.91
SGCE-208ENST00000450385 LCE2BO14633 110 aa9.37□□□□□ -0.91
SGCE-208ENST00000450385 TSPAN13O95857 204 aa9.37□□□□□ -0.91
SGCE-208ENST00000450385 SPAG11AQ6PDA7 123 aa9.37□□□□□ -0.91
SGCE-208ENST00000450385 SLC7A5P1Q8MH63 180 aa9.37□□□□□ -0.91
SGCE-208ENST00000450385 LINC00304Q8N9R0 145 aa9.37□□□□□ -0.91
SGCE-208ENST00000450385 ANAPC11Q9NYG5 84 aa9.37□□□□□ -0.91
SGCE-208ENST00000450385 FABP4P15090 132 aa9.35□□□□□ -0.91
SGCE-208ENST00000450385 HIGD2AQ9BW72 106 aa9.35□□□□□ -0.91
SGCE-208ENST00000450385 EIF4EBP3O60516 100 aaPredicted RBP9.34□□□□□ -0.91
SGCE-208ENST00000450385 NDUFC2O95298 119 aa9.34□□□□□ -0.91
SGCE-208ENST00000450385 LGALS3P17931 250 aaKnown RBP9.34□□□□□ -0.91
SGCE-208ENST00000450385 SPRR4Q96PI1 79 aa9.34□□□□□ -0.91
SGCE-208ENST00000450385 MIEN1Q9BRT3 115 aa9.34□□□□□ -0.91
SGCE-208ENST00000450385 ETDCA0A1B0GVM5 59 aa9.33□□□□□ -0.92
SGCE-208ENST00000450385 KRTAP4-16G5E9R7 235 aaPredicted RBP9.33□□□□□ -0.92
SGCE-208ENST00000450385 CBY1Q9Y3M2 126 aa9.33□□□□□ -0.92
SGCE-208ENST00000450385 TSPEAR-AS2P59090 65 aa9.32□□□□□ -0.92
SGCE-208ENST00000450385 SPANXB1Q9NS25 103 aaPredicted RBP9.32□□□□□ -0.92
SGCE-208ENST00000450385 E9PLD3 99 aa9.31□□□□□ -0.92
SGCE-208ENST00000450385 NCR3O14931 201 aa9.31□□□□□ -0.92
SGCE-208ENST00000450385 TRBV10-3A0A0K0K1G6 114 aa9.3□□□□□ -0.92
SGCE-208ENST00000450385 DDTP30046 118 aa9.29□□□□□ -0.92
SGCE-208ENST00000450385 SYS1-DBNDD2H3BUS1 97 aa9.28□□□□□ -0.92
SGCE-208ENST00000450385 SMCR5Q8TEV8 140 aa9.28□□□□□ -0.92
SGCE-208ENST00000450385 B5MCH6 92 aa9.27□□□□□ -0.93
SGCE-208ENST00000450385 HIST1H2BKO60814 126 aa9.27□□□□□ -0.93
SGCE-208ENST00000450385 IGLV6-57P01721 117 aa9.27□□□□□ -0.93
SGCE-208ENST00000450385 HIST1H2BJP06899 126 aa9.27□□□□□ -0.93
SGCE-208ENST00000450385 HIST1H2BOP23527 126 aa9.27□□□□□ -0.93
SGCE-208ENST00000450385 HIST1H2BBP33778 126 aa9.27□□□□□ -0.93
SGCE-208ENST00000450385 HIST1H2BDP58876 126 aa9.27□□□□□ -0.93
SGCE-208ENST00000450385 HIST1H2BCP62807 126 aa9.27□□□□□ -0.93
SGCE-208ENST00000450385 JOSD1Q15040 202 aaPredicted RBP9.27□□□□□ -0.93
SGCE-208ENST00000450385 HIST2H2BEQ16778 126 aa9.27□□□□□ -0.93
SGCE-208ENST00000450385 LINC00483Q53H64 154 aa9.27□□□□□ -0.93
SGCE-208ENST00000450385 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.27□□□□□ -0.93
SGCE-208ENST00000450385 HIST1H2BHQ93079 126 aa9.27□□□□□ -0.93
SGCE-208ENST00000450385 HIST1H2BNQ99877 126 aa9.27□□□□□ -0.93
SGCE-208ENST00000450385 HIST1H2BMQ99879 126 aa9.27□□□□□ -0.93
SGCE-208ENST00000450385 PMCHL2Q9BQD1 86 aa9.27□□□□□ -0.93
SGCE-208ENST00000450385 C5orf52A6NGY3 159 aa9.26□□□□□ -0.93
SGCE-208ENST00000450385 S100A7L2Q5SY68 101 aa9.26□□□□□ -0.93
SGCE-208ENST00000450385 PET117Q6UWS5 81 aa9.26□□□□□ -0.93
SGCE-208ENST00000450385 DAND5Q8N907 189 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms