RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 A8MWP4 228 aa1.52□□□□□ -2.17
USP53-202ENST00000450251 Q5VV11 94 aa1.52□□□□□ -2.17
USP53-202ENST00000450251 C22orf24Q9Y442 160 aa1.52□□□□□ -2.17
USP53-202ENST00000450251 CYSRT1A8MQ03 144 aa1.52□□□□□ -2.17
USP53-202ENST00000450251 SPINT4Q6UDR6 99 aa1.52□□□□□ -2.17
USP53-202ENST00000450251 UBE2DNLQ8IWF7 75 aa1.52□□□□□ -2.17
USP53-202ENST00000450251 DMAC1Q96GE9 116 aa1.52□□□□□ -2.17
USP53-202ENST00000450251 SHANK1Q9Y566 2161 aa1.52□□□□□ -2.17
USP53-202ENST00000450251 PROK1P58294 105 aa1.52□□□□□ -2.17
USP53-202ENST00000450251 IGHV4-61A0A0C4DH41 118 aa1.52□□□□□ -2.17
USP53-202ENST00000450251 FSHBP01225 129 aa1.52□□□□□ -2.17
USP53-202ENST00000450251 SLURP1P55000 103 aa1.52□□□□□ -2.17
USP53-202ENST00000450251 TNP2Q05952 138 aa1.52□□□□□ -2.17
USP53-202ENST00000450251 MSMPQ1L6U9 139 aa1.52□□□□□ -2.17
USP53-202ENST00000450251 FER1L5A0AVI2 2057 aa1.52□□□□□ -2.17
USP53-202ENST00000450251 MYO7BQ6PIF6 2116 aa1.51□□□□□ -2.17
USP53-202ENST00000450251 ANKHD1Q8IWZ3 2542 aaKnown RBP1.51□□□□□ -2.17
USP53-202ENST00000450251 ACANP16112 2415 aa1.51□□□□□ -2.17
USP53-202ENST00000450251 PCOTHQ58A44 107 aa1.51□□□□□ -2.17
USP53-202ENST00000450251 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.51□□□□□ -2.17
USP53-202ENST00000450251 KLK12Q9UKR0 248 aa1.51□□□□□ -2.17
USP53-202ENST00000450251 MYO7AQ13402 2215 aa1.51□□□□□ -2.17
USP53-202ENST00000450251 A0A0J9YWU9 116 aa1.51□□□□□ -2.17
USP53-202ENST00000450251 IGHV4-30-4P0DP06 118 aa1.51□□□□□ -2.17
USP53-202ENST00000450251 LINC01006Q8NI28 216 aa1.51□□□□□ -2.17
USP53-202ENST00000450251 IGLV4-60A0A075B6I1 120 aa1.51□□□□□ -2.17
USP53-202ENST00000450251 IGLV7-46A0A075B6I9 117 aa1.51□□□□□ -2.17
USP53-202ENST00000450251 FAM229BQ4G0N7 80 aa1.51□□□□□ -2.17
USP53-202ENST00000450251 Q8N9P0 234 aaPredicted RBP1.51□□□□□ -2.17
USP53-202ENST00000450251 AGRNO00468 2067 aa1.51□□□□□ -2.17
USP53-202ENST00000450251 FBN3Q75N90 2809 aa1.51□□□□□ -2.17
USP53-202ENST00000450251 COL27A1Q8IZC6 1860 aaPredicted RBP1.51□□□□□ -2.17
USP53-202ENST00000450251 GON4LQ3T8J9 2241 aa1.51□□□□□ -2.17
USP53-202ENST00000450251 A6NN06 94 aa1.51□□□□□ -2.17
USP53-202ENST00000450251 C16orf90A8MZG2 172 aa1.51□□□□□ -2.17
USP53-202ENST00000450251 LINC00313P59037 77 aa1.51□□□□□ -2.17
USP53-202ENST00000450251 RPL37AP61513 92 aaKnown RBP1.51□□□□□ -2.17
USP53-202ENST00000450251 WDR87Q6ZQQ6 2873 aa1.51□□□□□ -2.17
USP53-202ENST00000450251 ESPL1Q14674 2120 aa1.51□□□□□ -2.17
USP53-202ENST00000450251 Q6ZRX8 168 aa1.5□□□□□ -2.17
USP53-202ENST00000450251 CYSTM1Q9H1C7 97 aa1.5□□□□□ -2.17
USP53-202ENST00000450251 SPENQ96T58 3664 aaKnown RBP1.5□□□□□ -2.17
USP53-202ENST00000450251 PLA2G1BP04054 148 aaKnown RBP1.5□□□□□ -2.17
USP53-202ENST00000450251 FAM104AQ969W3 186 aa1.5□□□□□ -2.17
USP53-202ENST00000450251 NSD1Q96L73 2696 aaPredicted RBP1.5□□□□□ -2.17
USP53-202ENST00000450251 FN1P02751 2386 aaKnown RBP1.5□□□□□ -2.17
USP53-202ENST00000450251 DEFB1P60022 68 aa1.5□□□□□ -2.17
USP53-202ENST00000450251 ITPR2Q14571 2701 aa1.5□□□□□ -2.17
USP53-202ENST00000450251 HEATR1Q9H583 2144 aaKnown RBP1.5□□□□□ -2.17
USP53-202ENST00000450251 A8MTW9 85 aa1.5□□□□□ -2.17
USP53-202ENST00000450251 PLA2G2AP14555 144 aa1.5□□□□□ -2.17
USP53-202ENST00000450251 PLA2G2DQ9UNK4 145 aa1.5□□□□□ -2.17
USP53-202ENST00000450251 A0A087WSZ3 146 aa1.5□□□□□ -2.17
USP53-202ENST00000450251 A0A096LPF7 62 aa1.5□□□□□ -2.17
USP53-202ENST00000450251 UNQ6190/PRO20217Q6UXQ8 127 aa1.5□□□□□ -2.17
USP53-202ENST00000450251 F8P00451 2351 aa1.5□□□□□ -2.17
USP53-202ENST00000450251 URB1O60287 2271 aaKnown RBP1.5□□□□□ -2.17
USP53-202ENST00000450251 GTF3C1Q12789 2109 aa1.5□□□□□ -2.17
USP53-202ENST00000450251 SDK1Q7Z5N4 2213 aa1.49□□□□□ -2.17
USP53-202ENST00000450251 ADORA2A-AS1P86434 159 aa1.49□□□□□ -2.17
USP53-202ENST00000450251 C11orf71Q6IPW1 123 aa1.49□□□□□ -2.17
USP53-202ENST00000450251 ATRQ13535 2644 aa1.49□□□□□ -2.17
USP53-202ENST00000450251 IGHV6-1A0A0B4J1U7 121 aa1.49□□□□□ -2.17
USP53-202ENST00000450251 K7EQZ3 153 aa1.49□□□□□ -2.17
USP53-202ENST00000450251 NACAE9PAV3 2078 aa1.49□□□□□ -2.17
USP53-202ENST00000450251 PRRC2AP48634 2157 aaKnown RBP1.49□□□□□ -2.17
USP53-202ENST00000450251 Q6ZSN1 163 aa1.49□□□□□ -2.17
USP53-202ENST00000450251 TMEM105Q8N8V8 129 aa1.49□□□□□ -2.17
USP53-202ENST00000450251 Q8NA96 180 aa1.49□□□□□ -2.17
USP53-202ENST00000450251 C11orf45Q8TAV5 145 aa1.49□□□□□ -2.17
USP53-202ENST00000450251 X6R8D5 127 aa1.49□□□□□ -2.17
USP53-202ENST00000450251 CCDC168Q8NDH2 2452 aa1.49□□□□□ -2.17
USP53-202ENST00000450251 Q6YL49 198 aa1.49□□□□□ -2.17
USP53-202ENST00000450251 IGLV5-48A0A075B6I7 105 aa1.49□□□□□ -2.17
USP53-202ENST00000450251 FAM229AH3BQW9 127 aa1.49□□□□□ -2.17
USP53-202ENST00000450251 LINC00476Q8WZB0 136 aa1.49□□□□□ -2.17
USP53-202ENST00000450251 KNL1Q8NG31 2342 aa1.49□□□□□ -2.17
USP53-202ENST00000450251 DMDP11532 3685 aa1.49□□□□□ -2.17
USP53-202ENST00000450251 POLQO75417 2590 aa1.48□□□□□ -2.17
USP53-202ENST00000450251 RELNP78509 3460 aa1.48□□□□□ -2.17
USP53-202ENST00000450251 LCE6AA0A183 80 aa1.48□□□□□ -2.17
USP53-202ENST00000450251 CHTF8P0CG12 524 aa1.48□□□□□ -2.17
USP53-202ENST00000450251 PRR3P79522 188 aaKnown RBP1.48□□□□□ -2.17
USP53-202ENST00000450251 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.48□□□□□ -2.17
USP53-202ENST00000450251 MRPL34Q9BQ48 92 aaKnown RBP1.48□□□□□ -2.17
USP53-202ENST00000450251 TEX15Q9BXT5 2789 aa1.48□□□□□ -2.17
USP53-202ENST00000450251 H3BNG1 76 aa1.48□□□□□ -2.17
USP53-202ENST00000450251 LMO4P61968 165 aa1.48□□□□□ -2.17
USP53-202ENST00000450251 Q8NAQ8 132 aa1.48□□□□□ -2.17
USP53-202ENST00000450251 SPRR4Q96PI1 79 aa1.48□□□□□ -2.17
USP53-202ENST00000450251 LCE4AQ5TA78 99 aa1.48□□□□□ -2.17
USP53-202ENST00000450251 HTTP42858 3142 aa1.48□□□□□ -2.17
USP53-202ENST00000450251 NOTCH2NLQ7Z3S9 236 aa1.48□□□□□ -2.17
USP53-202ENST00000450251 C1orf134Q5TEV5 83 aa1.47□□□□□ -2.17
USP53-202ENST00000450251 ROS1P08922 2347 aa1.47□□□□□ -2.17
USP53-202ENST00000450251 ASCC3Q8N3C0 2202 aaKnown RBP1.47□□□□□ -2.17
USP53-202ENST00000450251 A0A0A0MQY5 61 aa1.47□□□□□ -2.17
USP53-202ENST00000450251 DEFB136Q30KP8 78 aa1.47□□□□□ -2.17
USP53-202ENST00000450251 PRR26Q8N8Z3 221 aa1.47□□□□□ -2.17
USP53-202ENST00000450251 C7orf33Q8WU49 177 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms