RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.01□□□□□ -1.77
LINC01961-201ENST00000449954 SFT2D1Q8WV19 159 aa4.01□□□□□ -1.77
LINC01961-201ENST00000449954 TIMM17AQ99595 171 aa4.01□□□□□ -1.77
LINC01961-201ENST00000449954 C2orf88Q9BSF0 95 aa4.01□□□□□ -1.77
LINC01961-201ENST00000449954 GPR98Q8WXG9 6306 aa4□□□□□ -1.77
LINC01961-201ENST00000449954 C5orf52A6NGY3 159 aa4□□□□□ -1.77
LINC01961-201ENST00000449954 RAB14P61106 215 aa4□□□□□ -1.77
LINC01961-201ENST00000449954 RPL24P83731 157 aaKnown RBP4□□□□□ -1.77
LINC01961-201ENST00000449954 GAGE2AQ6NT46 116 aa4□□□□□ -1.77
LINC01961-201ENST00000449954 TEX43Q6ZNM6 134 aa4□□□□□ -1.77
LINC01961-201ENST00000449954 SLC51BQ86UW2 128 aa4□□□□□ -1.77
LINC01961-201ENST00000449954 AMN1Q8IY45 258 aa4□□□□□ -1.77
LINC01961-201ENST00000449954 MBD3L1Q8WWY6 194 aa4□□□□□ -1.77
LINC01961-201ENST00000449954 TMEM141Q96I45 108 aa4□□□□□ -1.77
LINC01961-201ENST00000449954 C20orf78Q9BR46 151 aa4□□□□□ -1.77
LINC01961-201ENST00000449954 MANBALQ9NQG1 85 aa4□□□□□ -1.77
LINC01961-201ENST00000449954 PYGO1Q9Y3Y4 419 aa4□□□□□ -1.77
LINC01961-201ENST00000449954 IGLV4-3A0A075B6K6 122 aa3.99□□□□□ -1.77
LINC01961-201ENST00000449954 A0A0A0MQY5 61 aa3.99□□□□□ -1.77
LINC01961-201ENST00000449954 A0A1B0GV50 99 aa3.99□□□□□ -1.77
LINC01961-201ENST00000449954 SMKR1H3BMG3 65 aa3.99□□□□□ -1.77
LINC01961-201ENST00000449954 A0A1B0GUT8 65 aa3.98□□□□□ -1.77
LINC01961-201ENST00000449954 A8MWL6 223 aa3.98□□□□□ -1.77
LINC01961-201ENST00000449954 SMCR5Q8TEV8 140 aa3.98□□□□□ -1.77
LINC01961-201ENST00000449954 PDE6DO43924 150 aa3.97□□□□□ -1.77
LINC01961-201ENST00000449954 RAB5BP61020 215 aa3.97□□□□□ -1.77
LINC01961-201ENST00000449954 HERVK_113P63121 156 aa3.97□□□□□ -1.77
LINC01961-201ENST00000449954 SEC11AP67812 179 aa3.97□□□□□ -1.77
LINC01961-201ENST00000449954 C9orf153Q5TBE3 101 aa3.97□□□□□ -1.77
LINC01961-201ENST00000449954 FAM213BQ8TBF2 198 aa3.97□□□□□ -1.77
LINC01961-201ENST00000449954 SMIM2Q9BVW6 85 aa3.97□□□□□ -1.77
LINC01961-201ENST00000449954 EIF5A2Q9GZV4 153 aaKnown RBP3.97□□□□□ -1.77
LINC01961-201ENST00000449954 TRBV24-1A0A075B6N3 115 aa3.96□□□□□ -1.78
LINC01961-201ENST00000449954 UMAD1C9J7I0 102 aa3.96□□□□□ -1.78
LINC01961-201ENST00000449954 GATCO43716 136 aaKnown RBP3.96□□□□□ -1.78
LINC01961-201ENST00000449954 S100A1P23297 94 aa3.96□□□□□ -1.78
LINC01961-201ENST00000449954 KRTAP5-9P26371 169 aa3.96□□□□□ -1.78
LINC01961-201ENST00000449954 LINC00862A6NCI5 91 aa3.95□□□□□ -1.78
LINC01961-201ENST00000449954 SNAPINO95295 136 aa3.95□□□□□ -1.78
LINC01961-201ENST00000449954 C6orf99Q4VX62 202 aa3.95□□□□□ -1.78
LINC01961-201ENST00000449954 GNG13Q9P2W3 67 aa3.95□□□□□ -1.78
LINC01961-201ENST00000449954 CDKN2A-AS1Q9UH64 79 aa3.95□□□□□ -1.78
LINC01961-201ENST00000449954 TRBV20-1A0A075B6N2 111 aa3.94□□□□□ -1.78
LINC01961-201ENST00000449954 ETDCA0A1B0GVM5 59 aa3.94□□□□□ -1.78
LINC01961-201ENST00000449954 K7EN84 100 aa3.94□□□□□ -1.78
LINC01961-201ENST00000449954 NDUFA5Q16718 116 aa3.94□□□□□ -1.78
LINC01961-201ENST00000449954 KIAA1644Q3SXP7 199 aa3.94□□□□□ -1.78
LINC01961-201ENST00000449954 COX7B2Q8TF08 81 aa3.94□□□□□ -1.78
LINC01961-201ENST00000449954 C20orf166-AS1Q96NR2 134 aa3.94□□□□□ -1.78
LINC01961-201ENST00000449954 SND1-IT1Q9HBX3 110 aa3.94□□□□□ -1.78
LINC01961-201ENST00000449954 MED9Q9NWA0 146 aa3.94□□□□□ -1.78
LINC01961-201ENST00000449954 HIGD1CA8MV81 97 aa3.93□□□□□ -1.78
LINC01961-201ENST00000449954 SMIM1B2RUZ4 78 aa3.93□□□□□ -1.78
LINC01961-201ENST00000449954 ATP5LO75964 103 aa3.93□□□□□ -1.78
LINC01961-201ENST00000449954 SPRR1AP35321 89 aa3.93□□□□□ -1.78
LINC01961-201ENST00000449954 PDZD11Q5EBL8 140 aa3.93□□□□□ -1.78
LINC01961-201ENST00000449954 ATP11AUNQ6ZP68 121 aa3.93□□□□□ -1.78
LINC01961-201ENST00000449954 AMELXQ99217 191 aa3.93□□□□□ -1.78
LINC01961-201ENST00000449954 RAB5AP20339 215 aa3.92□□□□□ -1.78
LINC01961-201ENST00000449954 MRPL51Q4U2R6 128 aaKnown RBP3.92□□□□□ -1.78
LINC01961-201ENST00000449954 C2orf66Q6UXQ4 117 aa3.92□□□□□ -1.78
LINC01961-201ENST00000449954 FXYD6-FXYD2A0A087WZ82 144 aa3.91□□□□□ -1.78
LINC01961-201ENST00000449954 CKS2P33552 79 aa3.91□□□□□ -1.78
LINC01961-201ENST00000449954 PFN2P35080 140 aa3.91□□□□□ -1.78
LINC01961-201ENST00000449954 RIGQ13278 110 aa3.91□□□□□ -1.78
LINC01961-201ENST00000449954 FAM104BQ5XKR9 115 aa3.91□□□□□ -1.78
LINC01961-201ENST00000449954 Q8NDZ9 215 aa3.91□□□□□ -1.78
LINC01961-201ENST00000449954 COX17Q14061 63 aa3.9□□□□□ -1.79
LINC01961-201ENST00000449954 ZC2HC1BQ5TFG8 222 aa3.9□□□□□ -1.79
LINC01961-201ENST00000449954 KRTAP2-1Q9BYU5 128 aa3.9□□□□□ -1.79
LINC01961-201ENST00000449954 PAM16Q9Y3D7 125 aa3.9□□□□□ -1.79
LINC01961-201ENST00000449954 TRAV9-1A0A075B6T8 112 aa3.89□□□□□ -1.79
LINC01961-201ENST00000449954 TEX46H3BTG2 121 aa3.89□□□□□ -1.79
LINC01961-201ENST00000449954 GIPP09681 153 aaPredicted RBP3.89□□□□□ -1.79
LINC01961-201ENST00000449954 PAPPA-AS1Q5QFB9 102 aa3.89□□□□□ -1.79
LINC01961-201ENST00000449954 Q5XG85 94 aa3.89□□□□□ -1.79
LINC01961-201ENST00000449954 HRCT1Q6UXD1 115 aa3.89□□□□□ -1.79
LINC01961-201ENST00000449954 KCNQ1DNQ9H478 68 aa3.89□□□□□ -1.79
LINC01961-201ENST00000449954 CYSLTR1Q9Y271 337 aa3.89□□□□□ -1.79
LINC01961-201ENST00000449954 ERC2-IT1O76042 136 aa3.88□□□□□ -1.79
LINC01961-201ENST00000449954 Q5BKY6 102 aa3.88□□□□□ -1.79
LINC01961-201ENST00000449954 C10orf91Q5T1B1 145 aa3.88□□□□□ -1.79
LINC01961-201ENST00000449954 Q75L30 129 aa3.88□□□□□ -1.79
LINC01961-201ENST00000449954 ERG28Q9UKR5 140 aa3.88□□□□□ -1.79
LINC01961-201ENST00000449954 FAM236DA0A1B0GTK5 79 aa3.87□□□□□ -1.79
LINC01961-201ENST00000449954 D6R8Y8 96 aa3.87□□□□□ -1.79
LINC01961-201ENST00000449954 NPYP01303 97 aa3.87□□□□□ -1.79
LINC01961-201ENST00000449954 FAM236CP0DP71 79 aa3.87□□□□□ -1.79
LINC01961-201ENST00000449954 CD164Q04900 197 aa3.87□□□□□ -1.79
LINC01961-201ENST00000449954 C1orf195Q5TG92 126 aa3.87□□□□□ -1.79
LINC01961-201ENST00000449954 IGLV5-45A0A087WSX0 123 aa3.86□□□□□ -1.79
LINC01961-201ENST00000449954 A0A0U1RRA0 63 aa3.86□□□□□ -1.79
LINC01961-201ENST00000449954 PPBPP02775 128 aa3.86□□□□□ -1.79
LINC01961-201ENST00000449954 LOC389332A0A1B0GUA5 103 aa3.85□□□□□ -1.79
LINC01961-201ENST00000449954 TINCRA0A1B0GVN0 87 aa3.85□□□□□ -1.79
LINC01961-201ENST00000449954 G0S2P27469 103 aa3.85□□□□□ -1.79
LINC01961-201ENST00000449954 SEC61GP60059 68 aa3.85□□□□□ -1.79
LINC01961-201ENST00000449954 SLC25A34Q6PIV7 304 aa3.85□□□□□ -1.79
LINC01961-201ENST00000449954 Q6ZRX8 168 aa3.85□□□□□ -1.79
LINC01961-201ENST00000449954 ERASQ7Z444 233 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms