RNA–Protein interactions for RNA: ENST00000449504.5

HDLBP-222, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-222	ENST00000449504	SPCS1	Q9Y6A9	102 aa		4.15	□□□□□ -1.75
HDLBP-222	ENST00000449504	COX7A2L	O14548	114 aa		4.14	□□□□□ -1.75
HDLBP-222	ENST00000449504	TSHB	P01222	138 aa		4.14	□□□□□ -1.75
HDLBP-222	ENST00000449504	APCS	P02743	223 aa		4.14	□□□□□ -1.75
HDLBP-222	ENST00000449504	HERV-K104	P63124	156 aa		4.14	□□□□□ -1.75
HDLBP-222	ENST00000449504	TMEM136	Q6ZRR5	245 aa		4.14	□□□□□ -1.75
HDLBP-222	ENST00000449504	ATP5L2	Q7Z4Y8	100 aa		4.14	□□□□□ -1.75
HDLBP-222	ENST00000449504	LINC00304	Q8N9R0	145 aa		4.14	□□□□□ -1.75
HDLBP-222	ENST00000449504	C2orf48	Q96LS8	159 aa		4.14	□□□□□ -1.75
HDLBP-222	ENST00000449504		A0A1B0GW15	77 aa		4.13	□□□□□ -1.75
HDLBP-222	ENST00000449504	SYS1-DBNDD2	H3BUS1	97 aa		4.13	□□□□□ -1.75
HDLBP-222	ENST00000449504		H7C423	109 aa		4.13	□□□□□ -1.75
HDLBP-222	ENST00000449504	CFC1B	P0CG36	223 aa		4.13	□□□□□ -1.75
HDLBP-222	ENST00000449504	RPL32	P62910	135 aa	Known RBP	4.13	□□□□□ -1.75
HDLBP-222	ENST00000449504		Q6Q795	121 aa		4.13	□□□□□ -1.75
HDLBP-222	ENST00000449504		Q6ZVH6	145 aa		4.13	□□□□□ -1.75
HDLBP-222	ENST00000449504	C5orf38	Q86SI9	138 aa		4.13	□□□□□ -1.75
HDLBP-222	ENST00000449504	KRTAP7-1	Q8IUC3	87 aa		4.13	□□□□□ -1.75
HDLBP-222	ENST00000449504	MAP1LC3C	Q9BXW4	147 aa		4.13	□□□□□ -1.75
HDLBP-222	ENST00000449504	HIGD1B	Q9P298	99 aa		4.13	□□□□□ -1.75
HDLBP-222	ENST00000449504	SMIM27	A0A1W2PRY6	76 aa		4.12	□□□□□ -1.75
HDLBP-222	ENST00000449504	PAGE4	O60829	102 aa		4.12	□□□□□ -1.75
HDLBP-222	ENST00000449504	SMIM13	P0DJ93	91 aa		4.12	□□□□□ -1.75
HDLBP-222	ENST00000449504	SEC61B	P60468	96 aa	Known RBP	4.12	□□□□□ -1.75
HDLBP-222	ENST00000449504	MT1H	P80294	61 aa		4.12	□□□□□ -1.75
HDLBP-222	ENST00000449504	SPAG11B	Q08648	103 aa		4.12	□□□□□ -1.75
HDLBP-222	ENST00000449504	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.12	□□□□□ -1.75
HDLBP-222	ENST00000449504		H3BMG7	143 aa		4.11	□□□□□ -1.75
HDLBP-222	ENST00000449504		H3BUT2	72 aa		4.11	□□□□□ -1.75
HDLBP-222	ENST00000449504	LEPROTL1	O95214	131 aa		4.11	□□□□□ -1.75
HDLBP-222	ENST00000449504	NCR2	O95944	276 aa		4.11	□□□□□ -1.75
HDLBP-222	ENST00000449504	TAL2	Q16559	108 aa		4.11	□□□□□ -1.75
HDLBP-222	ENST00000449504	KRTAP13-2	Q52LG2	175 aa		4.11	□□□□□ -1.75
HDLBP-222	ENST00000449504	LINC01545	Q5VT33	79 aa		4.11	□□□□□ -1.75
HDLBP-222	ENST00000449504	FAM231D	Q6ZW35	169 aa		4.11	□□□□□ -1.75
HDLBP-222	ENST00000449504	RPL39L	Q96EH5	51 aa	Known RBP	4.11	□□□□□ -1.75
HDLBP-222	ENST00000449504	ANAPC13	Q9BS18	74 aa		4.11	□□□□□ -1.75
HDLBP-222	ENST00000449504		V9GYV3	84 aa		4.11	□□□□□ -1.75
HDLBP-222	ENST00000449504	SPINK8	P0C7L1	97 aa		4.1	□□□□□ -1.75
HDLBP-222	ENST00000449504	KRTAP10-6	P60371	365 aa	Predicted RBP	4.1	□□□□□ -1.75
HDLBP-222	ENST00000449504	C10orf25	Q5T742	122 aa		4.1	□□□□□ -1.75
HDLBP-222	ENST00000449504	LYRM7	Q5U5X0	104 aa		4.1	□□□□□ -1.75
HDLBP-222	ENST00000449504	C2orf91	Q6ZV80	131 aa		4.1	□□□□□ -1.75
HDLBP-222	ENST00000449504	GATD1	Q8NB37	220 aa		4.1	□□□□□ -1.75
HDLBP-222	ENST00000449504	OCC1	Q8TAD7	63 aa		4.1	□□□□□ -1.75
HDLBP-222	ENST00000449504	CDC42SE2	Q9NRR3	84 aa		4.1	□□□□□ -1.75
HDLBP-222	ENST00000449504	MRPL35	Q9NZE8	188 aa	Known RBP	4.1	□□□□□ -1.75
HDLBP-222	ENST00000449504	TRAV13-1	A0A0B4J241	112 aa		4.09	□□□□□ -1.75
HDLBP-222	ENST00000449504		E9PLD3	99 aa		4.09	□□□□□ -1.75
HDLBP-222	ENST00000449504	NDUFA1	O15239	70 aa		4.09	□□□□□ -1.75
HDLBP-222	ENST00000449504	IGLC6	P0CF74	106 aa		4.09	□□□□□ -1.75
HDLBP-222	ENST00000449504	RPL28	P46779	137 aa	Known RBP	4.09	□□□□□ -1.75
HDLBP-222	ENST00000449504	RNASE13	Q5GAN3	156 aa	Known RBP	4.09	□□□□□ -1.75
HDLBP-222	ENST00000449504	UNQ6190/PRO20217	Q6UXQ8	127 aa		4.09	□□□□□ -1.75
HDLBP-222	ENST00000449504	MAP1LC3A	Q9H492	121 aa		4.09	□□□□□ -1.75
HDLBP-222	ENST00000449504	SS18L2	Q9UHA2	77 aa		4.09	□□□□□ -1.75
HDLBP-222	ENST00000449504	IGKV2D-26	A0A0A0MRZ7	120 aa		4.08	□□□□□ -1.76
HDLBP-222	ENST00000449504	SDHAF1	A6NFY7	115 aa		4.08	□□□□□ -1.76
HDLBP-222	ENST00000449504		F2Z2F3	143 aa		4.08	□□□□□ -1.76
HDLBP-222	ENST00000449504		I3L3M4	83 aa		4.08	□□□□□ -1.76
HDLBP-222	ENST00000449504		M0R2T5	61 aa		4.08	□□□□□ -1.76
HDLBP-222	ENST00000449504	TLX1NB	P0CAT3	122 aa		4.08	□□□□□ -1.76
HDLBP-222	ENST00000449504	KRTAP13-3	Q3SY46	172 aa		4.08	□□□□□ -1.76
HDLBP-222	ENST00000449504	CT83	Q5H943	113 aa		4.08	□□□□□ -1.76
HDLBP-222	ENST00000449504	LINC00242	Q5T6M2	205 aa		4.08	□□□□□ -1.76
HDLBP-222	ENST00000449504	LYZL1	Q6UWQ5	148 aa		4.08	□□□□□ -1.76
HDLBP-222	ENST00000449504		Q6ZUT4	128 aa		4.08	□□□□□ -1.76
HDLBP-222	ENST00000449504	ATOH7	Q8N100	152 aa		4.08	□□□□□ -1.76
HDLBP-222	ENST00000449504	C6orf48	Q9UBA6	75 aa		4.08	□□□□□ -1.76
HDLBP-222	ENST00000449504	TRBV20OR9-2	A0A075B6H5	130 aa		4.07	□□□□□ -1.76
HDLBP-222	ENST00000449504		A0A1B0GX51	115 aa		4.07	□□□□□ -1.76
HDLBP-222	ENST00000449504	RPS28	P62857	69 aa	Known RBP	4.07	□□□□□ -1.76
HDLBP-222	ENST00000449504	TWIST1	Q15672	202 aa		4.07	□□□□□ -1.76
HDLBP-222	ENST00000449504	C9orf129	Q5T035	196 aa	Known RBP	4.07	□□□□□ -1.76
HDLBP-222	ENST00000449504	FAM19A2	Q8N3H0	131 aa		4.07	□□□□□ -1.76
HDLBP-222	ENST00000449504	SMIM20	Q8N5G0	67 aa		4.07	□□□□□ -1.76
HDLBP-222	ENST00000449504		B5MCH6	92 aa		4.06	□□□□□ -1.76
HDLBP-222	ENST00000449504	BCE1	O60756	84 aa		4.06	□□□□□ -1.76
HDLBP-222	ENST00000449504	KRTAP19-2	Q3LHN2	52 aa		4.06	□□□□□ -1.76
HDLBP-222	ENST00000449504	PPDPFL	Q8WWR9	84 aa		4.06	□□□□□ -1.76
HDLBP-222	ENST00000449504	C22orf24	Q9Y442	160 aa		4.06	□□□□□ -1.76
HDLBP-222	ENST00000449504		A0A1B0GXF2	115 aa		4.05	□□□□□ -1.76
HDLBP-222	ENST00000449504		F8WDY8	70 aa		4.05	□□□□□ -1.76
HDLBP-222	ENST00000449504		K7EN84	100 aa		4.05	□□□□□ -1.76
HDLBP-222	ENST00000449504	FP248	Q71RG6	208 aa	Predicted RBP	4.05	□□□□□ -1.76
HDLBP-222	ENST00000449504	OR13C6P	Q8NH95	151 aa		4.05	□□□□□ -1.76
HDLBP-222	ENST00000449504	PRO0461	Q9UI25	63 aa		4.05	□□□□□ -1.76
HDLBP-222	ENST00000449504	TRBV20-1	A0A075B6N2	111 aa		4.04	□□□□□ -1.76
HDLBP-222	ENST00000449504		A0A1B0GWB2	263 aa		4.04	□□□□□ -1.76
HDLBP-222	ENST00000449504	IFITM1	P13164	125 aa		4.04	□□□□□ -1.76
HDLBP-222	ENST00000449504	FOXA3	P55318	350 aa	Predicted RBP	4.04	□□□□□ -1.76
HDLBP-222	ENST00000449504	NDUFV3	P56181	108 aa	Known RBP	4.04	□□□□□ -1.76
HDLBP-222	ENST00000449504	HBB	P68871	147 aa		4.04	□□□□□ -1.76
HDLBP-222	ENST00000449504	FAM229B	Q4G0N7	80 aa		4.04	□□□□□ -1.76
HDLBP-222	ENST00000449504	RNASE7	Q9H1E1	156 aa	Known RBP	4.04	□□□□□ -1.76
HDLBP-222	ENST00000449504	UBE2D4	Q9Y2X8	147 aa		4.04	□□□□□ -1.76
HDLBP-222	ENST00000449504		A4D1N5	150 aa		4.03	□□□□□ -1.76
HDLBP-222	ENST00000449504	RPL37AP8	A6NKH3	93 aa		4.03	□□□□□ -1.76
HDLBP-222	ENST00000449504		A8MWL6	223 aa		4.03	□□□□□ -1.76
HDLBP-222	ENST00000449504	NDUFC2-KCTD14	E9PQ53	114 aa		4.03	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms