RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 SMR3AQ99954 134 aa5.43□□□□□ -1.54
NEDD9-204ENST00000448183 SMCR5Q8TEV8 140 aa5.42□□□□□ -1.54
NEDD9-204ENST00000448183 FAM218AQ96MZ4 157 aa5.42□□□□□ -1.54
NEDD9-204ENST00000448183 C22orf24Q9Y442 160 aa5.42□□□□□ -1.54
NEDD9-204ENST00000448183 RETNLBQ9BQ08 111 aa5.42□□□□□ -1.54
NEDD9-204ENST00000448183 IGLV5-52A0A0A0MRZ9 124 aa5.41□□□□□ -1.54
NEDD9-204ENST00000448183 A0A1B0GW54 56 aa5.41□□□□□ -1.54
NEDD9-204ENST00000448183 X6R8D5 127 aa5.41□□□□□ -1.54
NEDD9-204ENST00000448183 CHD8Q9HCK8 2581 aa5.4□□□□□ -1.54
NEDD9-204ENST00000448183 Q9UF83 564 aa5.4□□□□□ -1.55
NEDD9-204ENST00000448183 C4orf26Q17RF5 130 aa5.39□□□□□ -1.55
NEDD9-204ENST00000448183 TP53AIP1Q9HCN2 124 aa5.39□□□□□ -1.55
NEDD9-204ENST00000448183 VPREB1P12018 145 aa5.38□□□□□ -1.55
NEDD9-204ENST00000448183 Q6ZQT0 140 aa5.38□□□□□ -1.55
NEDD9-204ENST00000448183 SPTBN4Q9H254 2564 aa5.38□□□□□ -1.55
NEDD9-204ENST00000448183 C6orf48Q9UBA6 75 aa5.38□□□□□ -1.55
NEDD9-204ENST00000448183 LOC110117498A0A087WWA1 95 aa5.38□□□□□ -1.55
NEDD9-204ENST00000448183 LINC00167Q96N53 147 aa5.38□□□□□ -1.55
NEDD9-204ENST00000448183 ELOF1P60002 83 aaKnown RBP5.37□□□□□ -1.55
NEDD9-204ENST00000448183 Q8NBF4 154 aa5.37□□□□□ -1.55
NEDD9-204ENST00000448183 A0A1B0GU69 56 aa5.36□□□□□ -1.55
NEDD9-204ENST00000448183 H3BPC8 53 aa5.36□□□□□ -1.55
NEDD9-204ENST00000448183 IGKV2D-30A0A075B6S6 120 aa5.36□□□□□ -1.55
NEDD9-204ENST00000448183 IGKV2-30P06310 120 aa5.36□□□□□ -1.55
NEDD9-204ENST00000448183 COL4A2P08572 1712 aa5.35□□□□□ -1.55
NEDD9-204ENST00000448183 PTPRBP23467 1997 aa5.35□□□□□ -1.55
NEDD9-204ENST00000448183 ACYP2P14621 99 aa5.35□□□□□ -1.55
NEDD9-204ENST00000448183 C1orf134Q5TEV5 83 aa5.35□□□□□ -1.55
NEDD9-204ENST00000448183 TM2D3Q9BRN9 247 aa5.35□□□□□ -1.55
NEDD9-204ENST00000448183 FHL3Q13643 280 aa5.34□□□□□ -1.56
NEDD9-204ENST00000448183 SPAG11AQ6PDA7 123 aa5.33□□□□□ -1.56
NEDD9-204ENST00000448183 Q6ZRX8 168 aa5.33□□□□□ -1.56
NEDD9-204ENST00000448183 LITAFQ99732 161 aa5.33□□□□□ -1.56
NEDD9-204ENST00000448183 TRAV22A0A0B4J277 110 aa5.33□□□□□ -1.56
NEDD9-204ENST00000448183 LINC00476Q8WZB0 136 aa5.33□□□□□ -1.56
NEDD9-204ENST00000448183 POLQO75417 2590 aa5.32□□□□□ -1.56
NEDD9-204ENST00000448183 C7orf65Q6ZTY9 151 aa5.32□□□□□ -1.56
NEDD9-204ENST00000448183 H3BNG1 76 aa5.32□□□□□ -1.56
NEDD9-204ENST00000448183 MOBPQ13875 183 aa5.32□□□□□ -1.56
NEDD9-204ENST00000448183 ACANP16112 2415 aa5.32□□□□□ -1.56
NEDD9-204ENST00000448183 FASNP49327 2511 aaKnown RBP5.31□□□□□ -1.56
NEDD9-204ENST00000448183 CENPFP49454 3210 aa5.31□□□□□ -1.56
NEDD9-204ENST00000448183 ATP11AUNQ6ZP68 121 aa5.29□□□□□ -1.56
NEDD9-204ENST00000448183 SERTAD4-AS1Q5TG53 156 aa5.29□□□□□ -1.56
NEDD9-204ENST00000448183 ERC2-IT1O76042 136 aa5.29□□□□□ -1.56
NEDD9-204ENST00000448183 GVQW2A0A096LPI5 108 aaPredicted RBP5.28□□□□□ -1.56
NEDD9-204ENST00000448183 FSHBP01225 129 aa5.28□□□□□ -1.56
NEDD9-204ENST00000448183 KLK9Q2XQG4 91 aa5.28□□□□□ -1.56
NEDD9-204ENST00000448183 SPACA4Q8TDM5 124 aa5.28□□□□□ -1.56
NEDD9-204ENST00000448183 ST20-AS1Q8NBB2 130 aa5.28□□□□□ -1.56
NEDD9-204ENST00000448183 TRBV7-4A0A0J9YYF1 115 aa5.28□□□□□ -1.56
NEDD9-204ENST00000448183 NHLRC4P0CG21 123 aaPredicted RBP5.27□□□□□ -1.57
NEDD9-204ENST00000448183 IGLV6-57P01721 117 aa5.27□□□□□ -1.57
NEDD9-204ENST00000448183 EPM2AB3EWF7 344 aa5.27□□□□□ -1.57
NEDD9-204ENST00000448183 C8orf87E5RJ46 101 aa5.27□□□□□ -1.57
NEDD9-204ENST00000448183 ANKRD17O75179 2603 aaKnown RBP5.26□□□□□ -1.57
NEDD9-204ENST00000448183 PHF5AQ7RTV0 110 aaKnown RBP5.26□□□□□ -1.57
NEDD9-204ENST00000448183 RPL37AP61513 92 aaKnown RBP5.26□□□□□ -1.57
NEDD9-204ENST00000448183 MDFIQ99750 246 aa5.26□□□□□ -1.57
NEDD9-204ENST00000448183 EP400Q96L91 3159 aa5.26□□□□□ -1.57
NEDD9-204ENST00000448183 C16orf90A8MZG2 172 aa5.25□□□□□ -1.57
NEDD9-204ENST00000448183 LOC101927531A0A1B0GV80 90 aa5.25□□□□□ -1.57
NEDD9-204ENST00000448183 LINC00313P59037 77 aa5.24□□□□□ -1.57
NEDD9-204ENST00000448183 A8MUN3 132 aa5.24□□□□□ -1.57
NEDD9-204ENST00000448183 CYP4F30PQ9H0H9 118 aa5.24□□□□□ -1.57
NEDD9-204ENST00000448183 Q6ZRP5 223 aa5.24□□□□□ -1.57
NEDD9-204ENST00000448183 Q8NAQ8 132 aa5.24□□□□□ -1.57
NEDD9-204ENST00000448183 A8MWP4 228 aa5.24□□□□□ -1.57
NEDD9-204ENST00000448183 K7EQZ3 153 aa5.24□□□□□ -1.57
NEDD9-204ENST00000448183 KLKP1Q107X0 134 aa5.24□□□□□ -1.57
NEDD9-204ENST00000448183 EIF4EBP3O60516 100 aaPredicted RBP5.23□□□□□ -1.57
NEDD9-204ENST00000448183 COL27A1Q8IZC6 1860 aaPredicted RBP5.22□□□□□ -1.57
NEDD9-204ENST00000448183 COA5Q86WW8 74 aa5.22□□□□□ -1.57
NEDD9-204ENST00000448183 LINC00528Q8N1L1 170 aa5.22□□□□□ -1.57
NEDD9-204ENST00000448183 IGLV8-61A0A075B6I0 122 aa5.21□□□□□ -1.57
NEDD9-204ENST00000448183 FAM229AH3BQW9 127 aa5.21□□□□□ -1.57
NEDD9-204ENST00000448183 LINC00588Q9Y4M8 146 aa5.21□□□□□ -1.58
NEDD9-204ENST00000448183 USP24Q9UPU5 2620 aa5.21□□□□□ -1.58
NEDD9-204ENST00000448183 KCNQ1DNQ9H478 68 aa5.21□□□□□ -1.58
NEDD9-204ENST00000448183 MRPL34Q9BQ48 92 aaKnown RBP5.21□□□□□ -1.58
NEDD9-204ENST00000448183 LINC01600Q96MT4 127 aa5.2□□□□□ -1.58
NEDD9-204ENST00000448183 NBDYA0A0U1RRE5 68 aa5.19□□□□□ -1.58
NEDD9-204ENST00000448183 DNAH10OSP0CZ25 163 aa5.19□□□□□ -1.58
NEDD9-204ENST00000448183 IGLV1-50A0A075B6I6 118 aa5.19□□□□□ -1.58
NEDD9-204ENST00000448183 CHTF8P0CG12 524 aa5.19□□□□□ -1.58
NEDD9-204ENST00000448183 RTL8CO15255 209 aa5.19□□□□□ -1.58
NEDD9-204ENST00000448183 UQCR11O14957 56 aa5.19□□□□□ -1.58
NEDD9-204ENST00000448183 H7BZZ5 65 aa5.18□□□□□ -1.58
NEDD9-204ENST00000448183 FAM168BA1KXE4 195 aa5.18□□□□□ -1.58
NEDD9-204ENST00000448183 TYMSOSQ8TAI1 123 aa5.18□□□□□ -1.58
NEDD9-204ENST00000448183 LINC00336Q6ZUF6 198 aa5.18□□□□□ -1.58
NEDD9-204ENST00000448183 PRR15Q8IV56 129 aa5.17□□□□□ -1.58
NEDD9-204ENST00000448183 IGFL1Q6UW32 110 aa5.17□□□□□ -1.58
NEDD9-204ENST00000448183 CSNK1G2-AS1Q8NCQ2 148 aa5.16□□□□□ -1.58
NEDD9-204ENST00000448183 SPINT4Q6UDR6 99 aa5.16□□□□□ -1.58
NEDD9-204ENST00000448183 Q96NJ1 140 aa5.16□□□□□ -1.58
NEDD9-204ENST00000448183 PRR34Q9NV39 138 aa5.16□□□□□ -1.58
NEDD9-204ENST00000448183 GOLGB1Q14789 3259 aaKnown RBP5.16□□□□□ -1.58
NEDD9-204ENST00000448183 Q8N377 158 aa5.15□□□□□ -1.58
NEDD9-204ENST00000448183 C8orf17Q9NRJ1 99 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms