RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 MIR22HGQ0VDD5 57 aa5.72□□□□□ -1.49
MCF2L2-203ENST00000447025 SPINK14Q6IE38 97 aa5.72□□□□□ -1.49
MCF2L2-203ENST00000447025 LINC00612Q8N6U2 182 aa5.72□□□□□ -1.49
MCF2L2-203ENST00000447025 UTP20O75691 2785 aaKnown RBP5.72□□□□□ -1.49
MCF2L2-203ENST00000447025 IGLV1-44P01699 117 aa5.72□□□□□ -1.49
MCF2L2-203ENST00000447025 CRYBG3Q68DQ2 2970 aa5.72□□□□□ -1.49
MCF2L2-203ENST00000447025 DCHS2Q6V1P9 2916 aa5.71□□□□□ -1.49
MCF2L2-203ENST00000447025 SPAG11BQ08648 103 aa5.71□□□□□ -1.5
MCF2L2-203ENST00000447025 SPAG11AQ6PDA7 123 aa5.71□□□□□ -1.5
MCF2L2-203ENST00000447025 LINC00467Q9BRT7 94 aa5.71□□□□□ -1.5
MCF2L2-203ENST00000447025 CDKN2A-AS1Q9UH64 79 aa5.71□□□□□ -1.5
MCF2L2-203ENST00000447025 HELZ2Q9BYK8 2649 aaKnown RBP5.71□□□□□ -1.5
MCF2L2-203ENST00000447025 TACC2O95359 2948 aa5.71□□□□□ -1.5
MCF2L2-203ENST00000447025 LRBAP50851 2863 aa5.71□□□□□ -1.5
MCF2L2-203ENST00000447025 SMIM29Q86T20 159 aa5.71□□□□□ -1.5
MCF2L2-203ENST00000447025 MUC7Q8TAX7 377 aa5.71□□□□□ -1.5
MCF2L2-203ENST00000447025 DEFB104AQ8WTQ1 72 aa5.71□□□□□ -1.5
MCF2L2-203ENST00000447025 CR1P17927 2039 aa5.71□□□□□ -1.5
MCF2L2-203ENST00000447025 SORL1Q92673 2214 aa5.7□□□□□ -1.5
MCF2L2-203ENST00000447025 IGHV3-21A0A0B4J1V1 117 aa5.7□□□□□ -1.5
MCF2L2-203ENST00000447025 I3L2K1 104 aa5.7□□□□□ -1.5
MCF2L2-203ENST00000447025 ATP6V0E1O15342 81 aa5.7□□□□□ -1.5
MCF2L2-203ENST00000447025 CMC4P56277 68 aaPredicted RBP5.7□□□□□ -1.5
MCF2L2-203ENST00000447025 GAFA1Q96PS6 74 aa5.7□□□□□ -1.5
MCF2L2-203ENST00000447025 LENEPQ9Y5L5 61 aa5.7□□□□□ -1.5
MCF2L2-203ENST00000447025 VPS13CQ709C8 3753 aa5.69□□□□□ -1.5
MCF2L2-203ENST00000447025 PRAC2D3DTV9 90 aa5.69□□□□□ -1.5
MCF2L2-203ENST00000447025 P0C880 135 aa5.69□□□□□ -1.5
MCF2L2-203ENST00000447025 NAV3Q8IVL0 2385 aa5.69□□□□□ -1.5
MCF2L2-203ENST00000447025 DEFB109BQ30KR1 87 aa5.69□□□□□ -1.5
MCF2L2-203ENST00000447025 Q8N9L7 120 aa5.69□□□□□ -1.5
MCF2L2-203ENST00000447025 REG3GQ6UW15 175 aa5.68□□□□□ -1.5
MCF2L2-203ENST00000447025 LRRK2Q5S007 2527 aa5.68□□□□□ -1.5
MCF2L2-203ENST00000447025 AKAP6Q13023 2319 aa5.68□□□□□ -1.5
MCF2L2-203ENST00000447025 FAM229AH3BQW9 127 aa5.67□□□□□ -1.5
MCF2L2-203ENST00000447025 COA5Q86WW8 74 aa5.67□□□□□ -1.5
MCF2L2-203ENST00000447025 KCNQ1DNQ9H478 68 aa5.67□□□□□ -1.5
MCF2L2-203ENST00000447025 HIVEP3Q5T1R4 2406 aa5.67□□□□□ -1.5
MCF2L2-203ENST00000447025 USP9XQ93008 2570 aaPredicted RBP5.67□□□□□ -1.5
MCF2L2-203ENST00000447025 IGLV2-23P01705 113 aa5.67□□□□□ -1.5
MCF2L2-203ENST00000447025 C17orf58Q2M2W7 97 aa5.67□□□□□ -1.5
MCF2L2-203ENST00000447025 ICE1Q9Y2F5 2266 aa5.67□□□□□ -1.5
MCF2L2-203ENST00000447025 TRBV6-4A0A1B0GX49 114 aa5.66□□□□□ -1.5
MCF2L2-203ENST00000447025 LCE2DQ5TA82 110 aaPredicted RBP5.66□□□□□ -1.5
MCF2L2-203ENST00000447025 A0A096LNT2 108 aa5.66□□□□□ -1.5
MCF2L2-203ENST00000447025 M0QY20 66 aa5.66□□□□□ -1.5
MCF2L2-203ENST00000447025 RNASE1P07998 156 aaKnown RBP5.66□□□□□ -1.5
MCF2L2-203ENST00000447025 CHTF8P0CG12 524 aa5.66□□□□□ -1.5
MCF2L2-203ENST00000447025 ABCA4P78363 2273 aa5.66□□□□□ -1.5
MCF2L2-203ENST00000447025 ANKRD17O75179 2603 aaKnown RBP5.66□□□□□ -1.5
MCF2L2-203ENST00000447025 SMIM1B2RUZ4 78 aa5.65□□□□□ -1.5
MCF2L2-203ENST00000447025 IGHV4-59P01825 116 aa5.65□□□□□ -1.5
MCF2L2-203ENST00000447025 RNASE3P12724 160 aaKnown RBP5.65□□□□□ -1.5
MCF2L2-203ENST00000447025 MRGPRG-AS1Q2M3A8 158 aa5.65□□□□□ -1.5
MCF2L2-203ENST00000447025 ODF3L2Q3SX64 289 aa5.65□□□□□ -1.5
MCF2L2-203ENST00000447025 H0Y9P7 68 aa5.65□□□□□ -1.51
MCF2L2-203ENST00000447025 CCL18P55774 89 aa5.65□□□□□ -1.51
MCF2L2-203ENST00000447025 ST20-AS1Q8NBB2 130 aa5.65□□□□□ -1.51
MCF2L2-203ENST00000447025 KPRPQ5T749 579 aaPredicted RBP5.64□□□□□ -1.51
MCF2L2-203ENST00000447025 LINC00959A0A1B0GUT2 108 aa5.64□□□□□ -1.51
MCF2L2-203ENST00000447025 ZFP36P26651 326 aaKnown RBP5.64□□□□□ -1.51
MCF2L2-203ENST00000447025 PKDREJQ9NTG1 2253 aa5.64□□□□□ -1.51
MCF2L2-203ENST00000447025 NBPF19A0A087WUL8 3843 aa5.64□□□□□ -1.51
MCF2L2-203ENST00000447025 H3BPC8 53 aa5.63□□□□□ -1.51
MCF2L2-203ENST00000447025 SRRM5B3KS81 715 aa5.63□□□□□ -1.51
MCF2L2-203ENST00000447025 K7EIM0 57 aa5.63□□□□□ -1.51
MCF2L2-203ENST00000447025 LINC00158P58513 81 aa5.63□□□□□ -1.51
MCF2L2-203ENST00000447025 DEFB112Q30KQ8 113 aa5.63□□□□□ -1.51
MCF2L2-203ENST00000447025 PRR9Q5T870 116 aa5.63□□□□□ -1.51
MCF2L2-203ENST00000447025 SPG11Q96JI7 2443 aa5.62□□□□□ -1.51
MCF2L2-203ENST00000447025 COX7BP24311 80 aa5.62□□□□□ -1.51
MCF2L2-203ENST00000447025 C10orf25Q5T742 122 aa5.62□□□□□ -1.51
MCF2L2-203ENST00000447025 IGHV3-66A0A0C4DH42 116 aa5.62□□□□□ -1.51
MCF2L2-203ENST00000447025 LINC00575Q6W349 94 aa5.62□□□□□ -1.51
MCF2L2-203ENST00000447025 TRGV4A0A0C4DH28 118 aa5.61□□□□□ -1.51
MCF2L2-203ENST00000447025 CELSR2Q9HCU4 2923 aa5.61□□□□□ -1.51
MCF2L2-203ENST00000447025 HRNRQ86YZ3 2850 aaPredicted RBP5.61□□□□□ -1.51
MCF2L2-203ENST00000447025 MED13LQ71F56 2210 aa5.6□□□□□ -1.51
MCF2L2-203ENST00000447025 IGLV11-55A0A075B6I3 123 aa5.6□□□□□ -1.51
MCF2L2-203ENST00000447025 IGHV7-81A0A0B4J1V7 117 aa5.6□□□□□ -1.51
MCF2L2-203ENST00000447025 COX6A2Q02221 97 aa5.6□□□□□ -1.51
MCF2L2-203ENST00000447025 ANKHD1Q8IWZ3 2542 aaKnown RBP5.6□□□□□ -1.51
MCF2L2-203ENST00000447025 IGHV4-38-2P0DP08 117 aa5.6□□□□□ -1.51
MCF2L2-203ENST00000447025 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.6□□□□□ -1.51
MCF2L2-203ENST00000447025 NPBQ8NG41 125 aa5.59□□□□□ -1.51
MCF2L2-203ENST00000447025 POLQO75417 2590 aa5.59□□□□□ -1.51
MCF2L2-203ENST00000447025 IGHV3-64DA0A0J9YX35 117 aa5.59□□□□□ -1.51
MCF2L2-203ENST00000447025 MSMBP08118 114 aa5.59□□□□□ -1.51
MCF2L2-203ENST00000447025 C8orf17Q9NRJ1 99 aa5.59□□□□□ -1.51
MCF2L2-203ENST00000447025 A8MWP4 228 aa5.58□□□□□ -1.52
MCF2L2-203ENST00000447025 IGKV3-20P01619 116 aa5.58□□□□□ -1.52
MCF2L2-203ENST00000447025 LINC00483Q53H64 154 aa5.58□□□□□ -1.52
MCF2L2-203ENST00000447025 SPATA8Q6RVD6 105 aa5.58□□□□□ -1.52
MCF2L2-203ENST00000447025 DSCR9P59020 149 aa5.58□□□□□ -1.52
MCF2L2-203ENST00000447025 KRTAP25-1Q3LHN0 102 aa5.58□□□□□ -1.52
MCF2L2-203ENST00000447025 LUZP6Q538Z0 58 aa5.58□□□□□ -1.52
MCF2L2-203ENST00000447025 CELSR1Q9NYQ6 3014 aa5.58□□□□□ -1.52
MCF2L2-203ENST00000447025 TENM4Q6N022 2769 aa5.57□□□□□ -1.52
MCF2L2-203ENST00000447025 C9orf163Q8N9P6 203 aa5.57□□□□□ -1.52
MCF2L2-203ENST00000447025 ABCA12Q86UK0 2595 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms