RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 LINC00467Q9BRT7 94 aa9.13□□□□□ -0.95
DDX56-206ENST00000446987 SND1-IT1Q9HBX3 110 aa9.13□□□□□ -0.95
DDX56-206ENST00000446987 TENM3Q9P273 2699 aa9.13□□□□□ -0.95
DDX56-206ENST00000446987 K7EQG2 157 aa9.13□□□□□ -0.95
DDX56-206ENST00000446987 TMEM256-PLSCR3K7ERE1 68 aa9.13□□□□□ -0.95
DDX56-206ENST00000446987 B9D2Q9BPU9 175 aa9.13□□□□□ -0.95
DDX56-206ENST00000446987 IGHV3OR16-12A0A075B7B8 117 aa9.12□□□□□ -0.95
DDX56-206ENST00000446987 COX6A2Q02221 97 aa9.12□□□□□ -0.95
DDX56-206ENST00000446987 MAP6D1Q9H9H5 199 aa9.12□□□□□ -0.95
DDX56-206ENST00000446987 CXCL6P80162 114 aa9.11□□□□□ -0.95
DDX56-206ENST00000446987 DGAT2L7PQ6IED9 249 aa9.11□□□□□ -0.95
DDX56-206ENST00000446987 Q6ZRU5 148 aa9.11□□□□□ -0.95
DDX56-206ENST00000446987 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.1□□□□□ -0.95
DDX56-206ENST00000446987 PLAC8L1A1L4L8 177 aa9.1□□□□□ -0.95
DDX56-206ENST00000446987 LINC00474Q9P2X8 69 aa9.1□□□□□ -0.95
DDX56-206ENST00000446987 A0A0U1RQV1 116 aa9.09□□□□□ -0.95
DDX56-206ENST00000446987 A0A0U1RRA0 63 aa9.09□□□□□ -0.95
DDX56-206ENST00000446987 PMAIP1Q13794 54 aa9.09□□□□□ -0.95
DDX56-206ENST00000446987 RMI2Q96E14 147 aa9.09□□□□□ -0.95
DDX56-206ENST00000446987 TRBV7-4A0A0J9YYF1 115 aa9.08□□□□□ -0.96
DDX56-206ENST00000446987 RPL36AP83881 106 aaKnown RBP9.08□□□□□ -0.96
DDX56-206ENST00000446987 RPL36ALQ969Q0 106 aaKnown RBP9.08□□□□□ -0.96
DDX56-206ENST00000446987 LOC110117498A0A087WWA1 95 aa9.08□□□□□ -0.96
DDX56-206ENST00000446987 IGHV3-53P01767 116 aa9.07□□□□□ -0.96
DDX56-206ENST00000446987 MIFP14174 115 aa9.07□□□□□ -0.96
DDX56-206ENST00000446987 DEFB131AP59861 70 aa9.07□□□□□ -0.96
DDX56-206ENST00000446987 NBEAL2Q6ZNJ1 2754 aa9.06□□□□□ -0.96
DDX56-206ENST00000446987 TM2D3Q9BRN9 247 aa9.06□□□□□ -0.96
DDX56-206ENST00000446987 C11orf72Q8NBR9 251 aa9.05□□□□□ -0.96
DDX56-206ENST00000446987 STAB2Q8WWQ8 2551 aa9.05□□□□□ -0.96
DDX56-206ENST00000446987 TRBV6-4A0A1B0GX49 114 aa9.04□□□□□ -0.96
DDX56-206ENST00000446987 PDE6GP18545 87 aa9.04□□□□□ -0.96
DDX56-206ENST00000446987 LINC01547P58512 204 aaPredicted RBP9.04□□□□□ -0.96
DDX56-206ENST00000446987 ESRGQ1W209 222 aa9.04□□□□□ -0.96
DDX56-206ENST00000446987 SNURFQ9Y675 71 aa9.04□□□□□ -0.96
DDX56-206ENST00000446987 DNAH7Q8WXX0 4024 aa9.04□□□□□ -0.96
DDX56-206ENST00000446987 IGHV3-38A0A0C4DH36 116 aa9.04□□□□□ -0.96
DDX56-206ENST00000446987 H3BQ85 93 aa9.04□□□□□ -0.96
DDX56-206ENST00000446987 CCL18P55774 89 aa9.04□□□□□ -0.96
DDX56-206ENST00000446987 Q8N814 137 aa9.04□□□□□ -0.96
DDX56-206ENST00000446987 RETNQ9HD89 108 aa9.04□□□□□ -0.96
DDX56-206ENST00000446987 SNRPD3P62318 126 aaKnown RBP9.03□□□□□ -0.96
DDX56-206ENST00000446987 CD164Q04900 197 aa9.03□□□□□ -0.96
DDX56-206ENST00000446987 COX7B2Q8TF08 81 aa9.03□□□□□ -0.96
DDX56-206ENST00000446987 Q6ZQT0 140 aa9.02□□□□□ -0.96
DDX56-206ENST00000446987 TRAV10A0A0B4J240 114 aa9.02□□□□□ -0.97
DDX56-206ENST00000446987 K7EQD1 137 aa9.02□□□□□ -0.97
DDX56-206ENST00000446987 SLPIP03973 132 aa9.02□□□□□ -0.97
DDX56-206ENST00000446987 GIG44P09565 113 aaPredicted RBP9.02□□□□□ -0.97
DDX56-206ENST00000446987 CMC4P56277 68 aaPredicted RBP9.02□□□□□ -0.97
DDX56-206ENST00000446987 A8MTW9 85 aa9□□□□□ -0.97
DDX56-206ENST00000446987 TMEM254Q8TBM7 123 aa9□□□□□ -0.97
DDX56-206ENST00000446987 CDC42SE2Q9NRR3 84 aa9□□□□□ -0.97
DDX56-206ENST00000446987 SPINK13Q1W4C9 94 aa8.99□□□□□ -0.97
DDX56-206ENST00000446987 Q6ZSN1 163 aa8.99□□□□□ -0.97
DDX56-206ENST00000446987 C6orf223Q8N319 242 aa8.99□□□□□ -0.97
DDX56-206ENST00000446987 IGHV3-73A0A0B4J1V6 119 aa8.98□□□□□ -0.97
DDX56-206ENST00000446987 LINC00158P58513 81 aa8.98□□□□□ -0.97
DDX56-206ENST00000446987 Q6ZVQ6 151 aa8.98□□□□□ -0.97
DDX56-206ENST00000446987 ZNF561-AS1K7EIQ3 104 aa8.98□□□□□ -0.97
DDX56-206ENST00000446987 DEFB135Q30KP9 77 aa8.98□□□□□ -0.97
DDX56-206ENST00000446987 STHQ8IWL8 128 aa8.98□□□□□ -0.97
DDX56-206ENST00000446987 APOC4P55056 127 aa8.97□□□□□ -0.97
DDX56-206ENST00000446987 NREPQ16612 68 aa8.97□□□□□ -0.97
DDX56-206ENST00000446987 Q1T7F1 81 aa8.97□□□□□ -0.97
DDX56-206ENST00000446987 TRBV10-1A0A0K0K1A3 114 aa8.96□□□□□ -0.97
DDX56-206ENST00000446987 FAM229BQ4G0N7 80 aa8.96□□□□□ -0.97
DDX56-206ENST00000446987 Q8N3U1 123 aa8.96□□□□□ -0.97
DDX56-206ENST00000446987 C11orf68Q9H3H3 251 aaKnown RBP8.96□□□□□ -0.97
DDX56-206ENST00000446987 PAX4O43316 350 aa8.96□□□□□ -0.98
DDX56-206ENST00000446987 CSNK1G2-AS1Q8NCQ2 148 aa8.96□□□□□ -0.98
DDX56-206ENST00000446987 PRYO14603 147 aa8.95□□□□□ -0.98
DDX56-206ENST00000446987 Q6ZTC4 211 aa8.95□□□□□ -0.98
DDX56-206ENST00000446987 IL17DQ8TAD2 202 aa8.95□□□□□ -0.98
DDX56-206ENST00000446987 MPLKIPQ8TAP9 179 aa8.95□□□□□ -0.98
DDX56-206ENST00000446987 STARD9Q9P2P6 4700 aa8.94□□□□□ -0.98
DDX56-206ENST00000446987 IGKV3-20P01619 116 aa8.94□□□□□ -0.98
DDX56-206ENST00000446987 FUSP35637 526 aaKnown RBP eCLIP8.94□□□□□ -0.98
DDX56-206ENST00000446987 Q9UF83 564 aa8.94□□□□□ -0.98
DDX56-206ENST00000446987 CSMD3Q7Z407 3707 aa8.94□□□□□ -0.98
DDX56-206ENST00000446987 HAMPP81172 84 aa8.94□□□□□ -0.98
DDX56-206ENST00000446987 NTM-AS1Q6ZSK4 140 aa8.93□□□□□ -0.98
DDX56-206ENST00000446987 Q6ZTI0 123 aa8.93□□□□□ -0.98
DDX56-206ENST00000446987 NANOS2P60321 138 aaKnown RBP8.91□□□□□ -0.98
DDX56-206ENST00000446987 X6R8D5 127 aa8.91□□□□□ -0.98
DDX56-206ENST00000446987 DYNC2H1Q8NCM8 4307 aaKnown RBP8.9□□□□□ -0.98
DDX56-206ENST00000446987 BPY2O14599 106 aa8.9□□□□□ -0.98
DDX56-206ENST00000446987 Q8NAQ8 132 aa8.89□□□□□ -0.99
DDX56-206ENST00000446987 A0A087WZ39 114 aa8.89□□□□□ -0.99
DDX56-206ENST00000446987 hDV103S1A0JD37 113 aa8.89□□□□□ -0.99
DDX56-206ENST00000446987 LINC00575Q6W349 94 aa8.89□□□□□ -0.99
DDX56-206ENST00000446987 WWC2-AS2Q96NR7 200 aa8.89□□□□□ -0.99
DDX56-206ENST00000446987 IGHV3OR16-9A0A0B4J2B5 98 aa8.87□□□□□ -0.99
DDX56-206ENST00000446987 A0A0J9YWU9 116 aa8.87□□□□□ -0.99
DDX56-206ENST00000446987 LYRM9A8MSI8 78 aa8.87□□□□□ -0.99
DDX56-206ENST00000446987 OCR1Q9BZK8 76 aa8.87□□□□□ -0.99
DDX56-206ENST00000446987 IGHV4-28A0A0C4DH34 117 aa8.86□□□□□ -0.99
DDX56-206ENST00000446987 DAD1P61803 113 aa8.86□□□□□ -0.99
DDX56-206ENST00000446987 TOMM7Q9P0U1 55 aa8.86□□□□□ -0.99
DDX56-206ENST00000446987 UBE2L6O14933 153 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms