RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 H0Y9P7 68 aa5.91□□□□□ -1.46
PTPN3-204ENST00000446349 LINC00315P59091 139 aa5.91□□□□□ -1.46
PTPN3-204ENST00000446349 TYMSOSQ8TAI1 123 aa5.91□□□□□ -1.46
PTPN3-204ENST00000446349 SMIM26A0A096LP01 95 aa5.9□□□□□ -1.46
PTPN3-204ENST00000446349 MTORP42345 2549 aa5.9□□□□□ -1.46
PTPN3-204ENST00000446349 A0A087WYN8 130 aa5.9□□□□□ -1.46
PTPN3-204ENST00000446349 SPAG11AQ6PDA7 123 aa5.9□□□□□ -1.46
PTPN3-204ENST00000446349 PRLHP81277 87 aa5.89□□□□□ -1.47
PTPN3-204ENST00000446349 LINC00167Q96N53 147 aa5.89□□□□□ -1.47
PTPN3-204ENST00000446349 PMAIP1Q13794 54 aa5.89□□□□□ -1.47
PTPN3-204ENST00000446349 ADAMTSL4-AS1Q5T5F5 129 aa5.89□□□□□ -1.47
PTPN3-204ENST00000446349 C8orf87E5RJ46 101 aa5.88□□□□□ -1.47
PTPN3-204ENST00000446349 J3QL48 77 aa5.88□□□□□ -1.47
PTPN3-204ENST00000446349 TSPEAR-AS2P59090 65 aa5.88□□□□□ -1.47
PTPN3-204ENST00000446349 PRR3P79522 188 aaKnown RBP5.88□□□□□ -1.47
PTPN3-204ENST00000446349 URB1-AS1Q96HZ7 61 aa5.87□□□□□ -1.47
PTPN3-204ENST00000446349 SNURFQ9Y675 71 aa5.87□□□□□ -1.47
PTPN3-204ENST00000446349 RPL37AP61513 92 aaKnown RBP5.87□□□□□ -1.47
PTPN3-204ENST00000446349 MOBPQ13875 183 aa5.87□□□□□ -1.47
PTPN3-204ENST00000446349 C6orf48Q9UBA6 75 aa5.87□□□□□ -1.47
PTPN3-204ENST00000446349 Q8N3U1 123 aa5.87□□□□□ -1.47
PTPN3-204ENST00000446349 LINC00588Q9Y4M8 146 aa5.87□□□□□ -1.47
PTPN3-204ENST00000446349 ELOF1P60002 83 aaKnown RBP5.87□□□□□ -1.47
PTPN3-204ENST00000446349 TRBV7-7A0A0K0K1E9 115 aa5.86□□□□□ -1.47
PTPN3-204ENST00000446349 Q6ZRX8 168 aa5.86□□□□□ -1.47
PTPN3-204ENST00000446349 LINC00313P59037 77 aa5.86□□□□□ -1.47
PTPN3-204ENST00000446349 ACYP2P14621 99 aa5.85□□□□□ -1.47
PTPN3-204ENST00000446349 A8MTW9 85 aa5.85□□□□□ -1.47
PTPN3-204ENST00000446349 KIAA0087Q14695 138 aa5.85□□□□□ -1.47
PTPN3-204ENST00000446349 SPACA4Q8TDM5 124 aa5.85□□□□□ -1.47
PTPN3-204ENST00000446349 C19orf73Q9NVV2 129 aa5.85□□□□□ -1.47
PTPN3-204ENST00000446349 POLQO75417 2590 aa5.84□□□□□ -1.47
PTPN3-204ENST00000446349 XGP55808 180 aa5.84□□□□□ -1.47
PTPN3-204ENST00000446349 CCDC179H3BU77 68 aa5.84□□□□□ -1.47
PTPN3-204ENST00000446349 ATP11AUNQ6ZP68 121 aa5.84□□□□□ -1.47
PTPN3-204ENST00000446349 ACANP16112 2415 aa5.84□□□□□ -1.47
PTPN3-204ENST00000446349 A0A096LNJ9 63 aa5.83□□□□□ -1.48
PTPN3-204ENST00000446349 SERTAD4-AS1Q5TG53 156 aa5.82□□□□□ -1.48
PTPN3-204ENST00000446349 C7orf65Q6ZTY9 151 aa5.82□□□□□ -1.48
PTPN3-204ENST00000446349 PRO0628Q9UI54 55 aa5.82□□□□□ -1.48
PTPN3-204ENST00000446349 LOC110117498A0A087WWA1 95 aa5.82□□□□□ -1.48
PTPN3-204ENST00000446349 C1orf64Q8NEQ6 169 aa5.82□□□□□ -1.48
PTPN3-204ENST00000446349 LINC00310P59036 64 aa5.82□□□□□ -1.48
PTPN3-204ENST00000446349 SSBP3-AS1Q7Z2R9 100 aa5.82□□□□□ -1.48
PTPN3-204ENST00000446349 TRBV7-4A0A0J9YYF1 115 aa5.81□□□□□ -1.48
PTPN3-204ENST00000446349 EPM2AB3EWF7 344 aa5.81□□□□□ -1.48
PTPN3-204ENST00000446349 IGKV2D-30A0A075B6S6 120 aa5.81□□□□□ -1.48
PTPN3-204ENST00000446349 IGKV2-30P06310 120 aa5.81□□□□□ -1.48
PTPN3-204ENST00000446349 TM2D3Q9BRN9 247 aa5.8□□□□□ -1.48
PTPN3-204ENST00000446349 K7EIL1 84 aa5.8□□□□□ -1.48
PTPN3-204ENST00000446349 TMEM254Q8TBM7 123 aa5.8□□□□□ -1.48
PTPN3-204ENST00000446349 PHF5AQ7RTV0 110 aaKnown RBP5.79□□□□□ -1.48
PTPN3-204ENST00000446349 PLA2G2DQ9UNK4 145 aa5.79□□□□□ -1.48
PTPN3-204ENST00000446349 CSNK1G2-AS1Q8NCQ2 148 aa5.79□□□□□ -1.48
PTPN3-204ENST00000446349 LINC00476Q8WZB0 136 aa5.78□□□□□ -1.48
PTPN3-204ENST00000446349 TRAV22A0A0B4J277 110 aa5.78□□□□□ -1.48
PTPN3-204ENST00000446349 A0A096LNT2 108 aa5.78□□□□□ -1.48
PTPN3-204ENST00000446349 LOC101927531A0A1B0GV80 90 aa5.77□□□□□ -1.49
PTPN3-204ENST00000446349 TLX1NBP0CAT3 122 aa5.77□□□□□ -1.49
PTPN3-204ENST00000446349 IGLV6-57P01721 117 aa5.77□□□□□ -1.49
PTPN3-204ENST00000446349 PCOTHQ58A44 107 aa5.77□□□□□ -1.49
PTPN3-204ENST00000446349 PRR4Q16378 134 aa5.77□□□□□ -1.49
PTPN3-204ENST00000446349 LINC00846Q9NV44 126 aa5.76□□□□□ -1.49
PTPN3-204ENST00000446349 PRR34Q9NV39 138 aa5.76□□□□□ -1.49
PTPN3-204ENST00000446349 ZNF861PO60384 105 aa5.75□□□□□ -1.49
PTPN3-204ENST00000446349 KCNQ1DNQ9H478 68 aa5.75□□□□□ -1.49
PTPN3-204ENST00000446349 LINC00304Q8N9R0 145 aa5.75□□□□□ -1.49
PTPN3-204ENST00000446349 LINC00612Q8N6U2 182 aa5.74□□□□□ -1.49
PTPN3-204ENST00000446349 A0A1B0GU69 56 aa5.74□□□□□ -1.49
PTPN3-204ENST00000446349 RETNLBQ9BQ08 111 aa5.74□□□□□ -1.49
PTPN3-204ENST00000446349 EPG5Q9HCE0 2579 aa5.74□□□□□ -1.49
PTPN3-204ENST00000446349 SPINK1P00995 79 aa5.73□□□□□ -1.49
PTPN3-204ENST00000446349 A8MWP4 228 aa5.73□□□□□ -1.49
PTPN3-204ENST00000446349 Q6ZQT0 140 aa5.73□□□□□ -1.49
PTPN3-204ENST00000446349 A0A087WTM6 91 aa5.73□□□□□ -1.49
PTPN3-204ENST00000446349 KRTAP10-11P60412 298 aa5.72□□□□□ -1.49
PTPN3-204ENST00000446349 DEFB116Q30KQ4 102 aa5.72□□□□□ -1.49
PTPN3-204ENST00000446349 C9orf163Q8N9P6 203 aa5.72□□□□□ -1.49
PTPN3-204ENST00000446349 ST20-AS1Q8NBB2 130 aa5.72□□□□□ -1.49
PTPN3-204ENST00000446349 IGLV1-50A0A075B6I6 118 aa5.72□□□□□ -1.49
PTPN3-204ENST00000446349 Q96NJ1 140 aa5.72□□□□□ -1.49
PTPN3-204ENST00000446349 CNBPP62633 177 aaKnown RBP5.71□□□□□ -1.5
PTPN3-204ENST00000446349 SMIM29Q86T20 159 aa5.7□□□□□ -1.5
PTPN3-204ENST00000446349 CHTF8P0CG12 524 aa5.7□□□□□ -1.5
PTPN3-204ENST00000446349 COX6B2Q6YFQ2 88 aa5.7□□□□□ -1.5
PTPN3-204ENST00000446349 MRPL34Q9BQ48 92 aaKnown RBP5.7□□□□□ -1.5
PTPN3-204ENST00000446349 ERC2-IT1O76042 136 aa5.69□□□□□ -1.5
PTPN3-204ENST00000446349 A0A087WVE0 104 aa5.69□□□□□ -1.5
PTPN3-204ENST00000446349 CDIP1Q9H305 208 aa5.69□□□□□ -1.5
PTPN3-204ENST00000446349 RBM12B-AS1Q9P1G2 102 aa5.69□□□□□ -1.5
PTPN3-204ENST00000446349 ZNF575Q86XF7 245 aa5.68□□□□□ -1.5
PTPN3-204ENST00000446349 CR1P17927 2039 aa5.68□□□□□ -1.5
PTPN3-204ENST00000446349 RPS28P62857 69 aaKnown RBP5.68□□□□□ -1.5
PTPN3-204ENST00000446349 PSPHP1O15172 72 aa5.67□□□□□ -1.5
PTPN3-204ENST00000446349 SOSTDC1Q6X4U4 206 aa5.67□□□□□ -1.5
PTPN3-204ENST00000446349 APLNQ9ULZ1 77 aa5.67□□□□□ -1.5
PTPN3-204ENST00000446349 IGLV7-43P04211 117 aa5.65□□□□□ -1.5
PTPN3-204ENST00000446349 LINC00528Q8N1L1 170 aa5.65□□□□□ -1.5
PTPN3-204ENST00000446349 WIPF1O43516 503 aa5.65□□□□□ -1.5
PTPN3-204ENST00000446349 USP24Q9UPU5 2620 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms