RNA–Protein interactions for RNA: ENST00000446225.5

MCF2-206, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-206ENST00000446225 PMCHL2Q9BQD1 86 aa3.99□□□□□ -1.77
MCF2-206ENST00000446225 TMEM242Q9NWH2 141 aa3.99□□□□□ -1.77
MCF2-206ENST00000446225 GNG13Q9P2W3 67 aa3.99□□□□□ -1.77
MCF2-206ENST00000446225 C15orf53Q8NAA6 179 aa3.99□□□□□ -1.77
MCF2-206ENST00000446225 IMMP2LQ96T52 175 aa3.99□□□□□ -1.77
MCF2-206ENST00000446225 STARD9Q9P2P6 4700 aa3.98□□□□□ -1.77
MCF2-206ENST00000446225 IGKV3D-20A0A0C4DH25 116 aa3.98□□□□□ -1.77
MCF2-206ENST00000446225 SPART-AS1P0CW21 52 aa3.98□□□□□ -1.77
MCF2-206ENST00000446225 ZFP2Q6ZN57 461 aa3.98□□□□□ -1.77
MCF2-206ENST00000446225 ATP11AUNQ6ZP68 121 aa3.98□□□□□ -1.77
MCF2-206ENST00000446225 Q6ZR54 194 aa3.98□□□□□ -1.77
MCF2-206ENST00000446225 TSKUQ8WUA8 353 aa3.98□□□□□ -1.77
MCF2-206ENST00000446225 TP53TG3Q9ULZ0 132 aa3.98□□□□□ -1.77
MCF2-206ENST00000446225 LENEPQ9Y5L5 61 aa3.98□□□□□ -1.77
MCF2-206ENST00000446225 CSMD3Q7Z407 3707 aa3.98□□□□□ -1.77
MCF2-206ENST00000446225 DYNC2H1Q8NCM8 4307 aaKnown RBP3.98□□□□□ -1.77
MCF2-206ENST00000446225 TRBV7-7A0A0K0K1E9 115 aa3.97□□□□□ -1.77
MCF2-206ENST00000446225 TIMM17BO60830 172 aa3.97□□□□□ -1.77
MCF2-206ENST00000446225 ATP5EP56381 51 aaPredicted RBP3.97□□□□□ -1.77
MCF2-206ENST00000446225 Q6ZTC4 211 aa3.97□□□□□ -1.77
MCF2-206ENST00000446225 LINC00467Q9BRT7 94 aa3.97□□□□□ -1.77
MCF2-206ENST00000446225 SPCS1Q9Y6A9 102 aa3.97□□□□□ -1.77
MCF2-206ENST00000446225 ARL2-SNX15V9GYD0 113 aa3.97□□□□□ -1.77
MCF2-206ENST00000446225 PANO1I0J062 215 aa3.97□□□□□ -1.77
MCF2-206ENST00000446225 GNRH2O43555 120 aa3.97□□□□□ -1.77
MCF2-206ENST00000446225 Q5W150 140 aa3.97□□□□□ -1.77
MCF2-206ENST00000446225 OR10AG1Q8NH19 301 aa3.97□□□□□ -1.77
MCF2-206ENST00000446225 TMEM263Q8WUH6 116 aaKnown RBP3.97□□□□□ -1.77
MCF2-206ENST00000446225 NOP10Q9NPE3 64 aaKnown RBP3.97□□□□□ -1.77
MCF2-206ENST00000446225 MANBALQ9NQG1 85 aa3.97□□□□□ -1.77
MCF2-206ENST00000446225 PLECQ15149 4684 aaKnown RBP3.96□□□□□ -1.77
MCF2-206ENST00000446225 TRAV21A0A0B4J279 112 aa3.96□□□□□ -1.78
MCF2-206ENST00000446225 TRBV6-1A0A0K0K1D8 114 aa3.96□□□□□ -1.78
MCF2-206ENST00000446225 A6NN06 94 aa3.96□□□□□ -1.78
MCF2-206ENST00000446225 DEFB130BP0DP73 79 aa3.96□□□□□ -1.78
MCF2-206ENST00000446225 DEFB130AP0DP74 79 aa3.96□□□□□ -1.78
MCF2-206ENST00000446225 CRIP1P50238 77 aa3.96□□□□□ -1.78
MCF2-206ENST00000446225 ASB16-AS1Q495Z4 193 aa3.96□□□□□ -1.78
MCF2-206ENST00000446225 BVES-AS1Q5T3Y7 98 aa3.96□□□□□ -1.78
MCF2-206ENST00000446225 Q86TA4 180 aa3.96□□□□□ -1.78
MCF2-206ENST00000446225 UPK3BQ9BT76 320 aa3.96□□□□□ -1.78
MCF2-206ENST00000446225 TIMM8BQ9Y5J9 83 aaPredicted RBP3.96□□□□□ -1.78
MCF2-206ENST00000446225 TENM2Q9NT68 2774 aa3.96□□□□□ -1.78
MCF2-206ENST00000446225 A0A1W2PPM0 123 aa3.95□□□□□ -1.78
MCF2-206ENST00000446225 IGKCP01834 107 aa3.95□□□□□ -1.78
MCF2-206ENST00000446225 CKS2P33552 79 aa3.95□□□□□ -1.78
MCF2-206ENST00000446225 UBE2G1P62253 170 aa3.95□□□□□ -1.78
MCF2-206ENST00000446225 C5orf38Q86SI9 138 aa3.95□□□□□ -1.78
MCF2-206ENST00000446225 SPANXA2-OT1Q8N9U9 137 aa3.95□□□□□ -1.78
MCF2-206ENST00000446225 PPDPFLQ8WWR9 84 aa3.95□□□□□ -1.78
MCF2-206ENST00000446225 CLEC2BQ92478 149 aa3.95□□□□□ -1.78
MCF2-206ENST00000446225 LY96Q9Y6Y9 160 aa3.95□□□□□ -1.78
MCF2-206ENST00000446225 DEFB131BA0A096LNP1 70 aa3.95□□□□□ -1.78
MCF2-206ENST00000446225 TRAV10A0A0B4J240 114 aa3.95□□□□□ -1.78
MCF2-206ENST00000446225 HTN3P15516 51 aa3.95□□□□□ -1.78
MCF2-206ENST00000446225 ADCYAP1P18509 176 aa3.95□□□□□ -1.78
MCF2-206ENST00000446225 Q6ZTI0 123 aa3.95□□□□□ -1.78
MCF2-206ENST00000446225 BAGE2Q86Y30 109 aa3.95□□□□□ -1.78
MCF2-206ENST00000446225 TRGV1A0A0A0MS02 117 aa3.94□□□□□ -1.78
MCF2-206ENST00000446225 NUPR2A6NF83 97 aa3.94□□□□□ -1.78
MCF2-206ENST00000446225 SPINK4O60575 86 aa3.94□□□□□ -1.78
MCF2-206ENST00000446225 SH2D1AO60880 128 aa3.94□□□□□ -1.78
MCF2-206ENST00000446225 LINC00612Q8N6U2 182 aa3.94□□□□□ -1.78
MCF2-206ENST00000446225 Q8N8P6 123 aa3.94□□□□□ -1.78
MCF2-206ENST00000446225 UBE2WQ96B02 151 aa3.94□□□□□ -1.78
MCF2-206ENST00000446225 CHCHD1Q96BP2 118 aaKnown RBP3.94□□□□□ -1.78
MCF2-206ENST00000446225 TXNDC17Q9BRA2 123 aa3.94□□□□□ -1.78
MCF2-206ENST00000446225 TRAPPC1Q9Y5R8 145 aa3.94□□□□□ -1.78
MCF2-206ENST00000446225 ICOSQ9Y6W8 199 aa3.94□□□□□ -1.78
MCF2-206ENST00000446225 KMT2CQ8NEZ4 4911 aaKnown RBP3.94□□□□□ -1.78
MCF2-206ENST00000446225 ATOX1O00244 68 aa3.93□□□□□ -1.78
MCF2-206ENST00000446225 SLC25A20O43772 301 aa3.93□□□□□ -1.78
MCF2-206ENST00000446225 IGLV4-69A0A075B6H9 119 aa3.93□□□□□ -1.78
MCF2-206ENST00000446225 TMSB15BA0A087X1C1 80 aa3.93□□□□□ -1.78
MCF2-206ENST00000446225 NPYP01303 97 aa3.93□□□□□ -1.78
MCF2-206ENST00000446225 MIAQ16674 131 aa3.93□□□□□ -1.78
MCF2-206ENST00000446225 SMCR5Q8TEV8 140 aa3.93□□□□□ -1.78
MCF2-206ENST00000446225 RPS10P5Q9NQ39 176 aa3.93□□□□□ -1.78
MCF2-206ENST00000446225 APLNQ9ULZ1 77 aa3.93□□□□□ -1.78
MCF2-206ENST00000446225 TRBV24-1A0A075B6N3 115 aa3.92□□□□□ -1.78
MCF2-206ENST00000446225 TRGV2A0A075B6R0 118 aa3.92□□□□□ -1.78
MCF2-206ENST00000446225 A0A0B4J2C4 111 aa3.92□□□□□ -1.78
MCF2-206ENST00000446225 hADV29S1A0JD25 119 aa3.92□□□□□ -1.78
MCF2-206ENST00000446225 IGHV3-53P01767 116 aa3.92□□□□□ -1.78
MCF2-206ENST00000446225 MGST1P10620 155 aaKnown RBP3.92□□□□□ -1.78
MCF2-206ENST00000446225 SPATA45Q537H7 98 aa3.92□□□□□ -1.78
MCF2-206ENST00000446225 KIF25-AS1Q9Y6Z4 181 aa3.92□□□□□ -1.78
MCF2-206ENST00000446225 LECT2O14960 151 aa3.91□□□□□ -1.78
MCF2-206ENST00000446225 RNASE3P12724 160 aaKnown RBP3.91□□□□□ -1.78
MCF2-206ENST00000446225 ETDBQ3ZM63 59 aa3.91□□□□□ -1.78
MCF2-206ENST00000446225 DNAH1Q9P2D7 4330 aa3.91□□□□□ -1.78
MCF2-206ENST00000446225 RYR2Q92736 4967 aa3.91□□□□□ -1.78
MCF2-206ENST00000446225 ALMS1Q8TCU4 4167 aa3.91□□□□□ -1.78
MCF2-206ENST00000446225 A0A0J9YY99 117 aa3.91□□□□□ -1.78
MCF2-206ENST00000446225 LCE6AA0A183 80 aa3.91□□□□□ -1.78
MCF2-206ENST00000446225 A8MUU9 505 aa3.91□□□□□ -1.78
MCF2-206ENST00000446225 ARMS2P0C7Q2 107 aa3.91□□□□□ -1.78
MCF2-206ENST00000446225 LYSTQ99698 3801 aa3.91□□□□□ -1.78
MCF2-206ENST00000446225 SMDT1Q9H4I9 107 aa3.91□□□□□ -1.78
MCF2-206ENST00000446225 SACSQ9NZJ4 4579 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms