RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 NKAPP1Q8N9T2 125 aa6.53□□□□□ -1.36
SF3A1-203ENST00000444440 HIST1H2BHQ93079 126 aa6.53□□□□□ -1.36
SF3A1-203ENST00000444440 ZNF625Q96I27 306 aaPredicted RBP6.53□□□□□ -1.36
SF3A1-203ENST00000444440 HIST1H2BNQ99877 126 aa6.53□□□□□ -1.36
SF3A1-203ENST00000444440 HIST1H2BMQ99879 126 aa6.53□□□□□ -1.36
SF3A1-203ENST00000444440 DPM2O94777 84 aa6.52□□□□□ -1.37
SF3A1-203ENST00000444440 LINC00158P58513 81 aa6.52□□□□□ -1.37
SF3A1-203ENST00000444440 HERVK_113P61574 105 aa6.52□□□□□ -1.37
SF3A1-203ENST00000444440 HERV-K104P63124 156 aa6.52□□□□□ -1.37
SF3A1-203ENST00000444440 RPL24P83731 157 aaKnown RBP6.52□□□□□ -1.37
SF3A1-203ENST00000444440 IGLV5-37A0A075B6J1 123 aa6.51□□□□□ -1.37
SF3A1-203ENST00000444440 MYMXA0A1B0GTQ4 84 aa6.51□□□□□ -1.37
SF3A1-203ENST00000444440 IGKCP01834 107 aa6.51□□□□□ -1.37
SF3A1-203ENST00000444440 S100A1P23297 94 aa6.51□□□□□ -1.37
SF3A1-203ENST00000444440 PLEKHB2Q96CS7 222 aa6.51□□□□□ -1.37
SF3A1-203ENST00000444440 SND1-IT1Q9HBX3 110 aa6.51□□□□□ -1.37
SF3A1-203ENST00000444440 RPL37AP8A6NKH3 93 aa6.5□□□□□ -1.37
SF3A1-203ENST00000444440 LEPROTO15243 131 aa6.5□□□□□ -1.37
SF3A1-203ENST00000444440 LINC00167Q96N53 147 aa6.5□□□□□ -1.37
SF3A1-203ENST00000444440 NDUFA12Q9UI09 145 aa6.5□□□□□ -1.37
SF3A1-203ENST00000444440 ZNF861PO60384 105 aa6.49□□□□□ -1.37
SF3A1-203ENST00000444440 MEIG1Q5JSS6 88 aa6.49□□□□□ -1.37
SF3A1-203ENST00000444440 Q8NDZ9 215 aa6.49□□□□□ -1.37
SF3A1-203ENST00000444440 GAGE10A6NGK3 116 aa6.48□□□□□ -1.37
SF3A1-203ENST00000444440 SYS1-DBNDD2H3BUS1 97 aa6.48□□□□□ -1.37
SF3A1-203ENST00000444440 PMCHL2Q9BQD1 86 aa6.48□□□□□ -1.37
SF3A1-203ENST00000444440 A0A0U1RRA0 63 aa6.47□□□□□ -1.37
SF3A1-203ENST00000444440 J3QQQ9 107 aa6.47□□□□□ -1.37
SF3A1-203ENST00000444440 SMIM13P0DJ93 91 aa6.47□□□□□ -1.37
SF3A1-203ENST00000444440 LGALS3P17931 250 aaKnown RBP6.47□□□□□ -1.37
SF3A1-203ENST00000444440 RPL28P46779 137 aaKnown RBP6.47□□□□□ -1.37
SF3A1-203ENST00000444440 NMUP48645 174 aa6.47□□□□□ -1.37
SF3A1-203ENST00000444440 COA6Q5JTJ3 125 aaKnown RBP6.47□□□□□ -1.37
SF3A1-203ENST00000444440 IGLV1-50A0A075B6I6 118 aa6.46□□□□□ -1.38
SF3A1-203ENST00000444440 BCE1O60756 84 aa6.46□□□□□ -1.38
SF3A1-203ENST00000444440 VPREB1P12018 145 aa6.46□□□□□ -1.38
SF3A1-203ENST00000444440 PET117Q6UWS5 81 aa6.46□□□□□ -1.38
SF3A1-203ENST00000444440 KRTAP13-1Q8IUC0 172 aa6.46□□□□□ -1.38
SF3A1-203ENST00000444440 A0A087X002 238 aa6.45□□□□□ -1.38
SF3A1-203ENST00000444440 IGKV2-28A0A075B6P5 120 aa6.44□□□□□ -1.38
SF3A1-203ENST00000444440 IGKV2D-28P01615 120 aa6.44□□□□□ -1.38
SF3A1-203ENST00000444440 LINC01545Q5VT33 79 aa6.44□□□□□ -1.38
SF3A1-203ENST00000444440 MIR7-3HGQ8N6C7 128 aa6.44□□□□□ -1.38
SF3A1-203ENST00000444440 E9PLD3 99 aa6.43□□□□□ -1.38
SF3A1-203ENST00000444440 M0R378 163 aa6.43□□□□□ -1.38
SF3A1-203ENST00000444440 UBE2AP49459 152 aa6.43□□□□□ -1.38
SF3A1-203ENST00000444440 BOD1L2Q8IYS8 172 aa6.43□□□□□ -1.38
SF3A1-203ENST00000444440 ANAPC11Q9NYG5 84 aa6.43□□□□□ -1.38
SF3A1-203ENST00000444440 C20orf202A1L168 122 aa6.42□□□□□ -1.38
SF3A1-203ENST00000444440 TMEM238C9JI98 176 aa6.42□□□□□ -1.38
SF3A1-203ENST00000444440 C3orf79P0CE67 100 aa6.42□□□□□ -1.38
SF3A1-203ENST00000444440 AKR1D1P51857 326 aa6.42□□□□□ -1.38
SF3A1-203ENST00000444440 TSPEAR-AS2P59090 65 aa6.42□□□□□ -1.38
SF3A1-203ENST00000444440 KRTDAPP60985 99 aa6.42□□□□□ -1.38
SF3A1-203ENST00000444440 IGKV2D-26A0A0A0MRZ7 120 aa6.41□□□□□ -1.38
SF3A1-203ENST00000444440 KRTAP13-2Q52LG2 175 aa6.41□□□□□ -1.38
SF3A1-203ENST00000444440 MIEN1Q9BRT3 115 aa6.41□□□□□ -1.38
SF3A1-203ENST00000444440 LOC107984156A0A0G2JMH3 177 aa6.4□□□□□ -1.38
SF3A1-203ENST00000444440 RPL13AP40429 203 aaKnown RBP6.4□□□□□ -1.38
SF3A1-203ENST00000444440 S100A12P80511 92 aa6.4□□□□□ -1.38
SF3A1-203ENST00000444440 PRLHP81277 87 aa6.4□□□□□ -1.38
SF3A1-203ENST00000444440 ARL17AQ8IVW1 177 aa6.4□□□□□ -1.38
SF3A1-203ENST00000444440 TMEM126AQ9H061 195 aa6.4□□□□□ -1.38
SF3A1-203ENST00000444440 FAM19A1Q7Z5A9 133 aa6.39□□□□□ -1.39
SF3A1-203ENST00000444440 A0A0J9YXY3 114 aa6.38□□□□□ -1.39
SF3A1-203ENST00000444440 NCR3O14931 201 aa6.38□□□□□ -1.39
SF3A1-203ENST00000444440 S100A6P06703 90 aa6.38□□□□□ -1.39
SF3A1-203ENST00000444440 S100A2P29034 98 aa6.38□□□□□ -1.39
SF3A1-203ENST00000444440 DAND5Q8N907 189 aa6.38□□□□□ -1.39
SF3A1-203ENST00000444440 MUC2Q02817 5179 aa6.37□□□□□ -1.39
SF3A1-203ENST00000444440 TSPAN13O95857 204 aa6.37□□□□□ -1.39
SF3A1-203ENST00000444440 MUC17Q685J3 4493 aa6.37□□□□□ -1.39
SF3A1-203ENST00000444440 TRBV10-2A0A0K0K1G8 114 aa6.36□□□□□ -1.39
SF3A1-203ENST00000444440 ZNF815PA8K554 130 aa6.36□□□□□ -1.39
SF3A1-203ENST00000444440 PRYO14603 147 aa6.36□□□□□ -1.39
SF3A1-203ENST00000444440 TIMM17BO60830 172 aa6.36□□□□□ -1.39
SF3A1-203ENST00000444440 NDUFC2O95298 119 aa6.36□□□□□ -1.39
SF3A1-203ENST00000444440 KCNQ1DNQ9H478 68 aa6.36□□□□□ -1.39
SF3A1-203ENST00000444440 SPANXB1Q9NS25 103 aaPredicted RBP6.36□□□□□ -1.39
SF3A1-203ENST00000444440 CRYGAP11844 174 aa6.35□□□□□ -1.39
SF3A1-203ENST00000444440 SNRPEP62304 92 aaKnown RBP6.35□□□□□ -1.39
SF3A1-203ENST00000444440 PRR4Q16378 134 aa6.35□□□□□ -1.39
SF3A1-203ENST00000444440 TYMSOSQ8TAI1 123 aa6.35□□□□□ -1.39
SF3A1-203ENST00000444440 TRBV10-3A0A0K0K1G6 114 aa6.34□□□□□ -1.39
SF3A1-203ENST00000444440 ETDCA0A1B0GVM5 59 aa6.34□□□□□ -1.39
SF3A1-203ENST00000444440 DDTP30046 118 aa6.34□□□□□ -1.39
SF3A1-203ENST00000444440 S100A7L2Q5SY68 101 aa6.34□□□□□ -1.39
SF3A1-203ENST00000444440 ADAMTSL4-AS1Q5T5F5 129 aa6.34□□□□□ -1.39
SF3A1-203ENST00000444440 HIST3H2BBQ8N257 126 aa6.34□□□□□ -1.39
SF3A1-203ENST00000444440 LINC00337Q8N6G1 96 aa6.34□□□□□ -1.39
SF3A1-203ENST00000444440 CBY1Q9Y3M2 126 aa6.34□□□□□ -1.39
SF3A1-203ENST00000444440 NPC2P61916 151 aa6.33□□□□□ -1.4
SF3A1-203ENST00000444440 COPS9Q8WXC6 57 aa6.33□□□□□ -1.4
SF3A1-203ENST00000444440 HIGD2AQ9BW72 106 aa6.33□□□□□ -1.4
SF3A1-203ENST00000444440 FAM229BQ4G0N7 80 aa6.32□□□□□ -1.4
SF3A1-203ENST00000444440 SCGB1D4Q6XE38 83 aa6.32□□□□□ -1.4
SF3A1-203ENST00000444440 ATOH7Q8N100 152 aa6.32□□□□□ -1.4
SF3A1-203ENST00000444440 C3orf22Q8N5N4 141 aa6.32□□□□□ -1.4
SF3A1-203ENST00000444440 LINC00308Q8TCZ7 52 aa6.32□□□□□ -1.4
SF3A1-203ENST00000444440 HIST1H2BLQ99880 126 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms