RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 KRTAP10-8P60410 259 aa8.61□□□□□ -1.03
TREX1-202ENST00000444177 KRTDAPP60985 99 aa8.61□□□□□ -1.03
TREX1-202ENST00000444177 REG3GQ6UW15 175 aa8.61□□□□□ -1.03
TREX1-202ENST00000444177 SNRPEP62304 92 aaKnown RBP8.6□□□□□ -1.03
TREX1-202ENST00000444177 COX17Q14061 63 aa8.6□□□□□ -1.03
TREX1-202ENST00000444177 KRTAP11-1Q8IUC1 163 aa8.6□□□□□ -1.03
TREX1-202ENST00000444177 PLEKHB2Q96CS7 222 aa8.6□□□□□ -1.03
TREX1-202ENST00000444177 ZNF625Q96I27 306 aaPredicted RBP8.6□□□□□ -1.03
TREX1-202ENST00000444177 LEPROTO15243 131 aa8.59□□□□□ -1.03
TREX1-202ENST00000444177 LRP2P98164 4655 aa8.59□□□□□ -1.04
TREX1-202ENST00000444177 E9PLD3 99 aa8.58□□□□□ -1.04
TREX1-202ENST00000444177 HERV-K104P63124 156 aa8.58□□□□□ -1.04
TREX1-202ENST00000444177 NMUP48645 174 aa8.57□□□□□ -1.04
TREX1-202ENST00000444177 ERG28Q9UKR5 140 aa8.57□□□□□ -1.04
TREX1-202ENST00000444177 C22orf24Q9Y442 160 aa8.57□□□□□ -1.04
TREX1-202ENST00000444177 MYMXA0A1B0GTQ4 84 aa8.56□□□□□ -1.04
TREX1-202ENST00000444177 LINC00587B1AMM8 73 aa8.56□□□□□ -1.04
TREX1-202ENST00000444177 J3QQQ9 107 aa8.56□□□□□ -1.04
TREX1-202ENST00000444177 IGLV7-43P04211 117 aa8.56□□□□□ -1.04
TREX1-202ENST00000444177 PFN2P35080 140 aa8.55□□□□□ -1.04
TREX1-202ENST00000444177 LBHQ53QV2 105 aaPredicted RBP8.55□□□□□ -1.04
TREX1-202ENST00000444177 NDUFA12Q9UI09 145 aa8.55□□□□□ -1.04
TREX1-202ENST00000444177 TSPEAR-AS2P59090 65 aa8.54□□□□□ -1.04
TREX1-202ENST00000444177 LGALS3P17931 250 aaKnown RBP8.53□□□□□ -1.04
TREX1-202ENST00000444177 MRPL55Q7Z7F7 128 aaKnown RBP8.53□□□□□ -1.04
TREX1-202ENST00000444177 DIRC1Q969H9 104 aa8.53□□□□□ -1.04
TREX1-202ENST00000444177 TP73-AS1Q9UF72 201 aa8.53□□□□□ -1.04
TREX1-202ENST00000444177 NKAPP1Q8N9T2 125 aa8.51□□□□□ -1.05
TREX1-202ENST00000444177 GAGE10A6NGK3 116 aa8.5□□□□□ -1.05
TREX1-202ENST00000444177 H0Y9J4 135 aa8.5□□□□□ -1.05
TREX1-202ENST00000444177 MEIG1Q5JSS6 88 aa8.5□□□□□ -1.05
TREX1-202ENST00000444177 IGLV5-37A0A075B6J1 123 aa8.49□□□□□ -1.05
TREX1-202ENST00000444177 RPL37AP8A6NKH3 93 aa8.49□□□□□ -1.05
TREX1-202ENST00000444177 LINC00158P58513 81 aa8.49□□□□□ -1.05
TREX1-202ENST00000444177 LINC00167Q96N53 147 aa8.49□□□□□ -1.05
TREX1-202ENST00000444177 SND1-IT1Q9HBX3 110 aa8.49□□□□□ -1.05
TREX1-202ENST00000444177 RNF213Q63HN8 5207 aa8.49□□□□□ -1.05
TREX1-202ENST00000444177 SMIM13P0DJ93 91 aa8.48□□□□□ -1.05
TREX1-202ENST00000444177 IGKV2D-26A0A0A0MRZ7 120 aa8.47□□□□□ -1.05
TREX1-202ENST00000444177 A0A0U1RRA0 63 aa8.47□□□□□ -1.05
TREX1-202ENST00000444177 ATOH7Q8N100 152 aa8.47□□□□□ -1.05
TREX1-202ENST00000444177 A0A0J9YXY3 114 aa8.46□□□□□ -1.06
TREX1-202ENST00000444177 ANKRD39Q53RE8 183 aa8.46□□□□□ -1.06
TREX1-202ENST00000444177 IGKV2-28A0A075B6P5 120 aa8.45□□□□□ -1.06
TREX1-202ENST00000444177 LOC107984156A0A0G2JMH3 177 aa8.45□□□□□ -1.06
TREX1-202ENST00000444177 HSBP1L1C9JCN9 74 aa8.45□□□□□ -1.06
TREX1-202ENST00000444177 ZNF861PO60384 105 aa8.45□□□□□ -1.06
TREX1-202ENST00000444177 BCE1O60756 84 aa8.45□□□□□ -1.06
TREX1-202ENST00000444177 TIMM17BO60830 172 aa8.45□□□□□ -1.06
TREX1-202ENST00000444177 SCGB1D1O95968 90 aa8.45□□□□□ -1.06
TREX1-202ENST00000444177 IGKV2D-28P01615 120 aa8.45□□□□□ -1.06
TREX1-202ENST00000444177 VPREB1P12018 145 aa8.45□□□□□ -1.06
TREX1-202ENST00000444177 RPL24P83731 157 aaKnown RBP8.45□□□□□ -1.06
TREX1-202ENST00000444177 ARL17AQ8IVW1 177 aa8.45□□□□□ -1.06
TREX1-202ENST00000444177 MIR7-3HGQ8N6C7 128 aa8.45□□□□□ -1.06
TREX1-202ENST00000444177 ZNF815PA8K554 130 aa8.44□□□□□ -1.06
TREX1-202ENST00000444177 PRR26Q8N8Z3 221 aa8.44□□□□□ -1.06
TREX1-202ENST00000444177 TMA7Q9Y2S6 64 aaKnown RBP8.44□□□□□ -1.06
TREX1-202ENST00000444177 RPL28P46779 137 aaKnown RBP8.43□□□□□ -1.06
TREX1-202ENST00000444177 JOSD1Q15040 202 aaPredicted RBP8.42□□□□□ -1.06
TREX1-202ENST00000444177 Q8NDZ9 215 aa8.42□□□□□ -1.06
TREX1-202ENST00000444177 KRTAP1-4P0C5Y4 121 aa8.41□□□□□ -1.06
TREX1-202ENST00000444177 UBE2AP49459 152 aa8.41□□□□□ -1.06
TREX1-202ENST00000444177 LITAFQ99732 161 aa8.4□□□□□ -1.06
TREX1-202ENST00000444177 MIEN1Q9BRT3 115 aa8.4□□□□□ -1.06
TREX1-202ENST00000444177 TTTY13Q9BZ97 58 aa8.4□□□□□ -1.06
TREX1-202ENST00000444177 IGLV1-50A0A075B6I6 118 aa8.39□□□□□ -1.07
TREX1-202ENST00000444177 NDUFC2O95298 119 aa8.39□□□□□ -1.07
TREX1-202ENST00000444177 BOD1L2Q8IYS8 172 aa8.39□□□□□ -1.07
TREX1-202ENST00000444177 TMEM238C9JI98 176 aa8.38□□□□□ -1.07
TREX1-202ENST00000444177 ADAMTSL4-AS1Q5T5F5 129 aa8.38□□□□□ -1.07
TREX1-202ENST00000444177 SCGB1D4Q6XE38 83 aa8.38□□□□□ -1.07
TREX1-202ENST00000444177 Q6ZVH6 145 aa8.38□□□□□ -1.07
TREX1-202ENST00000444177 PCP2Q8IVA1 136 aa8.38□□□□□ -1.07
TREX1-202ENST00000444177 DAND5Q8N907 189 aa8.38□□□□□ -1.07
TREX1-202ENST00000444177 TMEM126AQ9H061 195 aa8.38□□□□□ -1.07
TREX1-202ENST00000444177 PPDPFQ9H3Y8 114 aa8.38□□□□□ -1.07
TREX1-202ENST00000444177 M0R378 163 aa8.37□□□□□ -1.07
TREX1-202ENST00000444177 NCR3O14931 201 aa8.37□□□□□ -1.07
TREX1-202ENST00000444177 FAM19A1Q7Z5A9 133 aa8.37□□□□□ -1.07
TREX1-202ENST00000444177 SPANXDQ9BXN6 97 aa8.37□□□□□ -1.07
TREX1-202ENST00000444177 SPANXCQ9NY87 97 aa8.37□□□□□ -1.07
TREX1-202ENST00000444177 TRBV10-2A0A0K0K1G8 114 aa8.36□□□□□ -1.07
TREX1-202ENST00000444177 PRLHP81277 87 aa8.36□□□□□ -1.07
TREX1-202ENST00000444177 KRTAP13-1Q8IUC0 172 aa8.36□□□□□ -1.07
TREX1-202ENST00000444177 COPS9Q8WXC6 57 aa8.36□□□□□ -1.07
TREX1-202ENST00000444177 RPL13AP40429 203 aaKnown RBP8.35□□□□□ -1.07
TREX1-202ENST00000444177 LINC00308Q8TCZ7 52 aa8.35□□□□□ -1.07
TREX1-202ENST00000444177 SPANXB1Q9NS25 103 aaPredicted RBP8.35□□□□□ -1.07
TREX1-202ENST00000444177 DLEU1O43261 78 aa8.34□□□□□ -1.07
TREX1-202ENST00000444177 COX8AP10176 69 aa8.34□□□□□ -1.07
TREX1-202ENST00000444177 IFITM1P13164 125 aa8.34□□□□□ -1.07
TREX1-202ENST00000444177 SOSTDC1Q6X4U4 206 aa8.34□□□□□ -1.07
TREX1-202ENST00000444177 VAMP8Q9BV40 100 aa8.34□□□□□ -1.07
TREX1-202ENST00000444177 LPAP08519 4548 aa8.34□□□□□ -1.07
TREX1-202ENST00000444177 PYY3Q5JQD4 70 aa8.33□□□□□ -1.08
TREX1-202ENST00000444177 EIF4EBP3O60516 100 aaPredicted RBP8.31□□□□□ -1.08
TREX1-202ENST00000444177 NPC2P61916 151 aa8.31□□□□□ -1.08
TREX1-202ENST00000444177 SPATA45Q537H7 98 aa8.31□□□□□ -1.08
TREX1-202ENST00000444177 PAM16Q9Y3D7 125 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms