RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 IGKV2-28A0A075B6P5 120 aa9.55□□□□□ -0.88
CTDSP1-204ENST00000443891 TRAV12-1A0A0B4J245 112 aa9.55□□□□□ -0.88
CTDSP1-204ENST00000443891 H0Y8G0 127 aa9.55□□□□□ -0.88
CTDSP1-204ENST00000443891 IGKV2D-28P01615 120 aa9.55□□□□□ -0.88
CTDSP1-204ENST00000443891 C11orf86A6NJI1 115 aa9.54□□□□□ -0.88
CTDSP1-204ENST00000443891 KRTAP13-2Q52LG2 175 aa9.54□□□□□ -0.88
CTDSP1-204ENST00000443891 TMEM126AQ9H061 195 aa9.54□□□□□ -0.88
CTDSP1-204ENST00000443891 IGKV2D-26A0A0A0MRZ7 120 aa9.53□□□□□ -0.88
CTDSP1-204ENST00000443891 LEPROTL1O95214 131 aa9.53□□□□□ -0.88
CTDSP1-204ENST00000443891 FAM19A1Q7Z5A9 133 aa9.53□□□□□ -0.88
CTDSP1-204ENST00000443891 FAM19A2Q8N3H0 131 aa9.53□□□□□ -0.88
CTDSP1-204ENST00000443891 LINC00304Q8N9R0 145 aa9.53□□□□□ -0.88
CTDSP1-204ENST00000443891 ZNF625Q96I27 306 aaPredicted RBP9.52□□□□□ -0.89
CTDSP1-204ENST00000443891 ANAPC11Q9NYG5 84 aa9.52□□□□□ -0.89
CTDSP1-204ENST00000443891 HSPB8Q9UJY1 196 aa9.52□□□□□ -0.89
CTDSP1-204ENST00000443891 M0R378 163 aa9.5□□□□□ -0.89
CTDSP1-204ENST00000443891 SCO1O75880 301 aa9.5□□□□□ -0.89
CTDSP1-204ENST00000443891 SERF1AO75920 110 aa9.5□□□□□ -0.89
CTDSP1-204ENST00000443891 LINC00158P58513 81 aa9.5□□□□□ -0.89
CTDSP1-204ENST00000443891 PRLHP81277 87 aa9.49□□□□□ -0.89
CTDSP1-204ENST00000443891 TMEM223A0PJW6 202 aa9.48□□□□□ -0.89
CTDSP1-204ENST00000443891 TMEM238C9JI98 176 aa9.48□□□□□ -0.89
CTDSP1-204ENST00000443891 FABP4P15090 132 aa9.48□□□□□ -0.89
CTDSP1-204ENST00000443891 PLEKHB2Q96CS7 222 aa9.48□□□□□ -0.89
CTDSP1-204ENST00000443891 COLCA2A8K830 154 aa9.47□□□□□ -0.89
CTDSP1-204ENST00000443891 LINC00587B1AMM8 73 aa9.47□□□□□ -0.89
CTDSP1-204ENST00000443891 PLNP26678 52 aa9.47□□□□□ -0.89
CTDSP1-204ENST00000443891 TPRXLQ17RH7 258 aa9.47□□□□□ -0.89
CTDSP1-204ENST00000443891 MEIG1Q5JSS6 88 aa9.47□□□□□ -0.89
CTDSP1-204ENST00000443891 SPAG11AQ6PDA7 123 aa9.47□□□□□ -0.89
CTDSP1-204ENST00000443891 HERVK_113P61574 105 aa9.46□□□□□ -0.9
CTDSP1-204ENST00000443891 HERV-K104P63124 156 aa9.45□□□□□ -0.9
CTDSP1-204ENST00000443891 MAP1LC3CQ9BXW4 147 aa9.45□□□□□ -0.9
CTDSP1-204ENST00000443891 ZNF706Q9Y5V0 76 aaPredicted RBP9.45□□□□□ -0.9
CTDSP1-204ENST00000443891 MUC2Q02817 5179 aa9.44□□□□□ -0.9
CTDSP1-204ENST00000443891 A0A0U1RRA0 63 aa9.44□□□□□ -0.9
CTDSP1-204ENST00000443891 MYMXA0A1B0GTQ4 84 aa9.43□□□□□ -0.9
CTDSP1-204ENST00000443891 DPM2O94777 84 aa9.43□□□□□ -0.9
CTDSP1-204ENST00000443891 Q8NDZ9 215 aa9.43□□□□□ -0.9
CTDSP1-204ENST00000443891 IGLV7-46A0A075B6I9 117 aa9.42□□□□□ -0.9
CTDSP1-204ENST00000443891 PRYO14603 147 aa9.42□□□□□ -0.9
CTDSP1-204ENST00000443891 HIGD2AQ9BW72 106 aa9.42□□□□□ -0.9
CTDSP1-204ENST00000443891 NDUFA12Q9UI09 145 aa9.42□□□□□ -0.9
CTDSP1-204ENST00000443891 SPRR4Q96PI1 79 aa9.41□□□□□ -0.9
CTDSP1-204ENST00000443891 CDIP1Q9H305 208 aa9.41□□□□□ -0.9
CTDSP1-204ENST00000443891 IGKCP01834 107 aa9.4□□□□□ -0.9
CTDSP1-204ENST00000443891 LINC00337Q8N6G1 96 aa9.4□□□□□ -0.9
CTDSP1-204ENST00000443891 RETNLBQ9BQ08 111 aa9.4□□□□□ -0.9
CTDSP1-204ENST00000443891 LEPROTO15243 131 aa9.39□□□□□ -0.91
CTDSP1-204ENST00000443891 SMIM13P0DJ93 91 aa9.39□□□□□ -0.91
CTDSP1-204ENST00000443891 LGALS3P17931 250 aaKnown RBP9.39□□□□□ -0.91
CTDSP1-204ENST00000443891 S100A12P80511 92 aa9.39□□□□□ -0.91
CTDSP1-204ENST00000443891 KCNQ1DNQ9H478 68 aa9.39□□□□□ -0.91
CTDSP1-204ENST00000443891 SPRR1AP35321 89 aa9.38□□□□□ -0.91
CTDSP1-204ENST00000443891 C4orf48Q5BLP8 95 aa9.38□□□□□ -0.91
CTDSP1-204ENST00000443891 FP248Q71RG6 208 aaPredicted RBP9.38□□□□□ -0.91
CTDSP1-204ENST00000443891 BOD1L2Q8IYS8 172 aa9.38□□□□□ -0.91
CTDSP1-204ENST00000443891 C3orf22Q8N5N4 141 aa9.38□□□□□ -0.91
CTDSP1-204ENST00000443891 LINC00310P59036 64 aa9.37□□□□□ -0.91
CTDSP1-204ENST00000443891 PMCHL2Q9BQD1 86 aa9.37□□□□□ -0.91
CTDSP1-204ENST00000443891 MIEN1Q9BRT3 115 aa9.37□□□□□ -0.91
CTDSP1-204ENST00000443891 MIR7-3HGQ8N6C7 128 aa9.36□□□□□ -0.91
CTDSP1-204ENST00000443891 J3QQQ9 107 aa9.35□□□□□ -0.91
CTDSP1-204ENST00000443891 HIST1H2BKO60814 126 aa9.35□□□□□ -0.91
CTDSP1-204ENST00000443891 HIST1H2BJP06899 126 aa9.35□□□□□ -0.91
CTDSP1-204ENST00000443891 HIST1H2BOP23527 126 aa9.35□□□□□ -0.91
CTDSP1-204ENST00000443891 HIST1H2BBP33778 126 aa9.35□□□□□ -0.91
CTDSP1-204ENST00000443891 NMUP48645 174 aa9.35□□□□□ -0.91
CTDSP1-204ENST00000443891 HIST1H2BDP58876 126 aa9.35□□□□□ -0.91
CTDSP1-204ENST00000443891 HIST1H2BCP62807 126 aa9.35□□□□□ -0.91
CTDSP1-204ENST00000443891 HIST2H2BEQ16778 126 aa9.35□□□□□ -0.91
CTDSP1-204ENST00000443891 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.35□□□□□ -0.91
CTDSP1-204ENST00000443891 HIST1H2BHQ93079 126 aa9.35□□□□□ -0.91
CTDSP1-204ENST00000443891 HIST1H2BNQ99877 126 aa9.35□□□□□ -0.91
CTDSP1-204ENST00000443891 HIST1H2BMQ99879 126 aa9.35□□□□□ -0.91
CTDSP1-204ENST00000443891 PPDPFQ9H3Y8 114 aa9.35□□□□□ -0.91
CTDSP1-204ENST00000443891 LOC107984156A0A0G2JMH3 177 aa9.34□□□□□ -0.91
CTDSP1-204ENST00000443891 ETDCA0A1B0GVM5 59 aa9.34□□□□□ -0.91
CTDSP1-204ENST00000443891 ARL17AQ8IVW1 177 aa9.34□□□□□ -0.91
CTDSP1-204ENST00000443891 KRTAP4-16G5E9R7 235 aaPredicted RBP9.33□□□□□ -0.92
CTDSP1-204ENST00000443891 SYS1-DBNDD2H3BUS1 97 aa9.32□□□□□ -0.92
CTDSP1-204ENST00000443891 SPINK1P00995 79 aa9.32□□□□□ -0.92
CTDSP1-204ENST00000443891 LCE2AQ5TA79 106 aaPredicted RBP9.32□□□□□ -0.92
CTDSP1-204ENST00000443891 SMCR5Q8TEV8 140 aa9.32□□□□□ -0.92
CTDSP1-204ENST00000443891 TRBV10-2A0A0K0K1G8 114 aa9.31□□□□□ -0.92
CTDSP1-204ENST00000443891 NCR3O14931 201 aa9.31□□□□□ -0.92
CTDSP1-204ENST00000443891 LINC00483Q53H64 154 aa9.31□□□□□ -0.92
CTDSP1-204ENST00000443891 TRBV10-3A0A0K0K1G6 114 aa9.3□□□□□ -0.92
CTDSP1-204ENST00000443891 C20orf202A1L168 122 aa9.29□□□□□ -0.92
CTDSP1-204ENST00000443891 RPS29P62273 56 aaKnown RBP9.29□□□□□ -0.92
CTDSP1-204ENST00000443891 PET117Q6UWS5 81 aa9.29□□□□□ -0.92
CTDSP1-204ENST00000443891 Q8NBF4 154 aa9.29□□□□□ -0.92
CTDSP1-204ENST00000443891 TSPEAR-AS2P59090 65 aa9.28□□□□□ -0.92
CTDSP1-204ENST00000443891 SSBP3-AS1Q7Z2R9 100 aa9.28□□□□□ -0.92
CTDSP1-204ENST00000443891 MUC17Q685J3 4493 aa9.27□□□□□ -0.93
CTDSP1-204ENST00000443891 E9PLD3 99 aa9.27□□□□□ -0.93
CTDSP1-204ENST00000443891 KRTDAPP60985 99 aa9.27□□□□□ -0.93
CTDSP1-204ENST00000443891 B5MCH6 92 aa9.26□□□□□ -0.93
CTDSP1-204ENST00000443891 DDTP30046 118 aa9.26□□□□□ -0.93
CTDSP1-204ENST00000443891 S100A7L2Q5SY68 101 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms