RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 J3QQQ9 107 aa7.84□□□□□ -1.15
PDLIM2-212ENST00000443561 KRTDAPP60985 99 aa7.84□□□□□ -1.15
PDLIM2-212ENST00000443561 COX17Q14061 63 aa7.84□□□□□ -1.15
PDLIM2-212ENST00000443561 TP73-AS1Q9UF72 201 aa7.84□□□□□ -1.15
PDLIM2-212ENST00000443561 DMBT1Q9UGM3 2413 aaPredicted RBP7.84□□□□□ -1.15
PDLIM2-212ENST00000443561 SFTA2Q6UW10 78 aa7.83□□□□□ -1.16
PDLIM2-212ENST00000443561 PLEKHB2Q96CS7 222 aa7.83□□□□□ -1.16
PDLIM2-212ENST00000443561 LINC00167Q96N53 147 aa7.83□□□□□ -1.16
PDLIM2-212ENST00000443561 TTTY13Q9BZ97 58 aa7.83□□□□□ -1.16
PDLIM2-212ENST00000443561 EIF4EBP3O60516 100 aaPredicted RBP7.82□□□□□ -1.16
PDLIM2-212ENST00000443561 C1orf137Q5JT78 98 aa7.82□□□□□ -1.16
PDLIM2-212ENST00000443561 MRPL55Q7Z7F7 128 aaKnown RBP7.82□□□□□ -1.16
PDLIM2-212ENST00000443561 MIR7-3HGQ8N6C7 128 aa7.82□□□□□ -1.16
PDLIM2-212ENST00000443561 GAGE10A6NGK3 116 aa7.81□□□□□ -1.16
PDLIM2-212ENST00000443561 IGLV7-43P04211 117 aa7.81□□□□□ -1.16
PDLIM2-212ENST00000443561 LINC00158P58513 81 aa7.81□□□□□ -1.16
PDLIM2-212ENST00000443561 HERV-K104P63124 156 aa7.81□□□□□ -1.16
PDLIM2-212ENST00000443561 ANKRD39Q53RE8 183 aa7.81□□□□□ -1.16
PDLIM2-212ENST00000443561 DAND5Q8N907 189 aa7.81□□□□□ -1.16
PDLIM2-212ENST00000443561 UBR4Q5T4S7 5183 aa7.8□□□□□ -1.16
PDLIM2-212ENST00000443561 MYMXA0A1B0GTQ4 84 aa7.8□□□□□ -1.16
PDLIM2-212ENST00000443561 C5orf52A6NGY3 159 aa7.8□□□□□ -1.16
PDLIM2-212ENST00000443561 HERVK_113P61574 105 aa7.8□□□□□ -1.16
PDLIM2-212ENST00000443561 UBE2BP63146 152 aa7.8□□□□□ -1.16
PDLIM2-212ENST00000443561 SOSTDC1Q6X4U4 206 aa7.8□□□□□ -1.16
PDLIM2-212ENST00000443561 ATOH7Q8N100 152 aa7.8□□□□□ -1.16
PDLIM2-212ENST00000443561 LITAFQ99732 161 aa7.8□□□□□ -1.16
PDLIM2-212ENST00000443561 RPL37AP8A6NKH3 93 aa7.79□□□□□ -1.16
PDLIM2-212ENST00000443561 SNRPEP62304 92 aaKnown RBP7.79□□□□□ -1.16
PDLIM2-212ENST00000443561 MEIG1Q5JSS6 88 aa7.79□□□□□ -1.16
PDLIM2-212ENST00000443561 ADAMTSL4-AS1Q5T5F5 129 aa7.79□□□□□ -1.16
PDLIM2-212ENST00000443561 SPINK6Q6UWN8 80 aa7.79□□□□□ -1.16
PDLIM2-212ENST00000443561 A0A0J9YXY3 114 aa7.78□□□□□ -1.16
PDLIM2-212ENST00000443561 OXTP01178 125 aa7.78□□□□□ -1.16
PDLIM2-212ENST00000443561 NMUP48645 174 aa7.78□□□□□ -1.16
PDLIM2-212ENST00000443561 LOC107984156A0A0G2JMH3 177 aa7.77□□□□□ -1.17
PDLIM2-212ENST00000443561 LGALS3P17931 250 aaKnown RBP7.77□□□□□ -1.17
PDLIM2-212ENST00000443561 KRTAP13-1Q8IUC0 172 aa7.77□□□□□ -1.17
PDLIM2-212ENST00000443561 ARL17AQ8IVW1 177 aa7.77□□□□□ -1.17
PDLIM2-212ENST00000443561 IGLV1-50A0A075B6I6 118 aa7.76□□□□□ -1.17
PDLIM2-212ENST00000443561 KRTAP1-4P0C5Y4 121 aa7.76□□□□□ -1.17
PDLIM2-212ENST00000443561 LBHQ53QV2 105 aaPredicted RBP7.76□□□□□ -1.17
PDLIM2-212ENST00000443561 IGKV2-28A0A075B6P5 120 aa7.75□□□□□ -1.17
PDLIM2-212ENST00000443561 TMEM238C9JI98 176 aa7.75□□□□□ -1.17
PDLIM2-212ENST00000443561 IGKV2D-28P01615 120 aa7.75□□□□□ -1.17
PDLIM2-212ENST00000443561 NKAPP1Q8N9T2 125 aa7.75□□□□□ -1.17
PDLIM2-212ENST00000443561 M0R378 163 aa7.74□□□□□ -1.17
PDLIM2-212ENST00000443561 BOD1L2Q8IYS8 172 aa7.74□□□□□ -1.17
PDLIM2-212ENST00000443561 LINC01600Q96MT4 127 aa7.74□□□□□ -1.17
PDLIM2-212ENST00000443561 H0Y9J4 135 aa7.73□□□□□ -1.17
PDLIM2-212ENST00000443561 NCR3O14931 201 aa7.73□□□□□ -1.17
PDLIM2-212ENST00000443561 BCE1O60756 84 aa7.73□□□□□ -1.17
PDLIM2-212ENST00000443561 S100A6P06703 90 aa7.73□□□□□ -1.17
PDLIM2-212ENST00000443561 S100A2P29034 98 aa7.73□□□□□ -1.17
PDLIM2-212ENST00000443561 PCP2Q8IVA1 136 aa7.73□□□□□ -1.17
PDLIM2-212ENST00000443561 C20orf202A1L168 122 aa7.72□□□□□ -1.17
PDLIM2-212ENST00000443561 ZNF815PA8K554 130 aa7.72□□□□□ -1.17
PDLIM2-212ENST00000443561 J3QL48 77 aa7.72□□□□□ -1.17
PDLIM2-212ENST00000443561 KRTAP10-8P60410 259 aa7.72□□□□□ -1.17
PDLIM2-212ENST00000443561 NPC2P61916 151 aa7.72□□□□□ -1.17
PDLIM2-212ENST00000443561 RPL24P83731 157 aaKnown RBP7.72□□□□□ -1.17
PDLIM2-212ENST00000443561 ZNF861PO60384 105 aa7.71□□□□□ -1.18
PDLIM2-212ENST00000443561 TMEM126AQ9H061 195 aa7.71□□□□□ -1.18
PDLIM2-212ENST00000443561 LINC00587B1AMM8 73 aa7.7□□□□□ -1.18
PDLIM2-212ENST00000443561 TIMM17BO60830 172 aa7.7□□□□□ -1.18
PDLIM2-212ENST00000443561 TRBV10-3A0A0K0K1G6 114 aa7.69□□□□□ -1.18
PDLIM2-212ENST00000443561 KRTAP4-16G5E9R7 235 aaPredicted RBP7.69□□□□□ -1.18
PDLIM2-212ENST00000443561 SPRR1AP35321 89 aa7.69□□□□□ -1.18
PDLIM2-212ENST00000443561 PRLHP81277 87 aa7.69□□□□□ -1.18
PDLIM2-212ENST00000443561 LINC00308Q8TCZ7 52 aa7.69□□□□□ -1.18
PDLIM2-212ENST00000443561 DIRC1Q969H9 104 aa7.69□□□□□ -1.18
PDLIM2-212ENST00000443561 REG3GQ6UW15 175 aa7.68□□□□□ -1.18
PDLIM2-212ENST00000443561 NDUFC2O95298 119 aa7.67□□□□□ -1.18
PDLIM2-212ENST00000443561 PRR26Q8N8Z3 221 aa7.66□□□□□ -1.18
PDLIM2-212ENST00000443561 SPANXDQ9BXN6 97 aa7.66□□□□□ -1.18
PDLIM2-212ENST00000443561 KCNQ1DNQ9H478 68 aa7.66□□□□□ -1.18
PDLIM2-212ENST00000443561 SPANXCQ9NY87 97 aa7.66□□□□□ -1.18
PDLIM2-212ENST00000443561 TRBV10-2A0A0K0K1G8 114 aa7.65□□□□□ -1.18
PDLIM2-212ENST00000443561 PRYO14603 147 aa7.65□□□□□ -1.18
PDLIM2-212ENST00000443561 IGLV6-57P01721 117 aa7.65□□□□□ -1.18
PDLIM2-212ENST00000443561 SPANXB1Q9NS25 103 aaPredicted RBP7.65□□□□□ -1.18
PDLIM2-212ENST00000443561 RPL28P46779 137 aaKnown RBP7.64□□□□□ -1.19
PDLIM2-212ENST00000443561 FAM19A1Q7Z5A9 133 aa7.64□□□□□ -1.19
PDLIM2-212ENST00000443561 ANAPC11Q9NYG5 84 aa7.64□□□□□ -1.19
PDLIM2-212ENST00000443561 HMCN2Q8NDA2 5059 aa7.63□□□□□ -1.19
PDLIM2-212ENST00000443561 A0A087X002 238 aa7.63□□□□□ -1.19
PDLIM2-212ENST00000443561 UBE2AP49459 152 aa7.63□□□□□ -1.19
PDLIM2-212ENST00000443561 SCGB1D1O95968 90 aa7.62□□□□□ -1.19
PDLIM2-212ENST00000443561 DDTP30046 118 aa7.62□□□□□ -1.19
PDLIM2-212ENST00000443561 AKR1D1P51857 326 aa7.62□□□□□ -1.19
PDLIM2-212ENST00000443561 LINC00337Q8N6G1 96 aa7.62□□□□□ -1.19
PDLIM2-212ENST00000443561 TMA7Q9Y2S6 64 aaKnown RBP7.62□□□□□ -1.19
PDLIM2-212ENST00000443561 KRTAP13-2Q52LG2 175 aa7.61□□□□□ -1.19
PDLIM2-212ENST00000443561 MIEN1Q9BRT3 115 aa7.61□□□□□ -1.19
PDLIM2-212ENST00000443561 JOSD1Q15040 202 aaPredicted RBP7.6□□□□□ -1.19
PDLIM2-212ENST00000443561 SCGB1D4Q6XE38 83 aa7.6□□□□□ -1.19
PDLIM2-212ENST00000443561 SMCR5Q8TEV8 140 aa7.6□□□□□ -1.19
PDLIM2-212ENST00000443561 B5MCH6 92 aa7.59□□□□□ -1.19
PDLIM2-212ENST00000443561 ERC2-IT1O76042 136 aa7.59□□□□□ -1.19
PDLIM2-212ENST00000443561 PYY3Q5JQD4 70 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms