RNA–Protein interactions for RNA: ENST00000443560.1

NUCB1-205, Transcript of nucleobindin 1, humanhuman

TSL 4

Gene NUCB1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-205ENST00000443560 PLNP26678 52 aa9□□□□□ -0.97
NUCB1-205ENST00000443560 LINC01545Q5VT33 79 aa9□□□□□ -0.97
NUCB1-205ENST00000443560 C20orf202A1L168 122 aa8.99□□□□□ -0.97
NUCB1-205ENST00000443560 DPM2O94777 84 aa8.99□□□□□ -0.97
NUCB1-205ENST00000443560 ZNF22P17026 224 aaPredicted RBP8.99□□□□□ -0.97
NUCB1-205ENST00000443560 CKS1BP61024 79 aa8.99□□□□□ -0.97
NUCB1-205ENST00000443560 IGKCP01834 107 aa8.98□□□□□ -0.97
NUCB1-205ENST00000443560 LBHQ53QV2 105 aaPredicted RBP8.98□□□□□ -0.97
NUCB1-205ENST00000443560 TMEM170BQ5T4T1 132 aa8.98□□□□□ -0.97
NUCB1-205ENST00000443560 PMCHL2Q9BQD1 86 aa8.98□□□□□ -0.97
NUCB1-205ENST00000443560 TOMM7Q9P0U1 55 aa8.98□□□□□ -0.97
NUCB1-205ENST00000443560 C22orf24Q9Y442 160 aa8.98□□□□□ -0.97
NUCB1-205ENST00000443560 SMIM1B2RUZ4 78 aa8.96□□□□□ -0.98
NUCB1-205ENST00000443560 SPINK8P0C7L1 97 aa8.96□□□□□ -0.98
NUCB1-205ENST00000443560 AKR1D1P51857 326 aa8.96□□□□□ -0.98
NUCB1-205ENST00000443560 C6orf226Q5I0X4 101 aa8.96□□□□□ -0.98
NUCB1-205ENST00000443560 XAGE1AQ9HD64 81 aa8.96□□□□□ -0.98
NUCB1-205ENST00000443560 FAT4Q6V0I7 4981 aa8.95□□□□□ -0.98
NUCB1-205ENST00000443560 RPL28P46779 137 aaKnown RBP8.95□□□□□ -0.98
NUCB1-205ENST00000443560 Q8IZM0 81 aa8.94□□□□□ -0.98
NUCB1-205ENST00000443560 KRTAP9-2Q9BYQ4 174 aa8.94□□□□□ -0.98
NUCB1-205ENST00000443560 A0A087X002 238 aa8.93□□□□□ -0.98
NUCB1-205ENST00000443560 IGLV5-39A0A0G2JS06 123 aa8.93□□□□□ -0.98
NUCB1-205ENST00000443560 TMEM223A0PJW6 202 aa8.93□□□□□ -0.98
NUCB1-205ENST00000443560 CRYGAP11844 174 aa8.93□□□□□ -0.98
NUCB1-205ENST00000443560 HERVK_113P61574 105 aa8.93□□□□□ -0.98
NUCB1-205ENST00000443560 TYMSOSQ8TAI1 123 aa8.93□□□□□ -0.98
NUCB1-205ENST00000443560 BCE1O60756 84 aa8.92□□□□□ -0.98
NUCB1-205ENST00000443560 MRPL55Q7Z7F7 128 aaKnown RBP8.92□□□□□ -0.98
NUCB1-205ENST00000443560 TP73-AS1Q9UF72 201 aa8.92□□□□□ -0.98
NUCB1-205ENST00000443560 MUC17Q685J3 4493 aa8.92□□□□□ -0.98
NUCB1-205ENST00000443560 SCGB1D1O95968 90 aa8.91□□□□□ -0.98
NUCB1-205ENST00000443560 COX7B2Q8TF08 81 aa8.91□□□□□ -0.98
NUCB1-205ENST00000443560 CXCL5P42830 114 aa8.89□□□□□ -0.99
NUCB1-205ENST00000443560 ATOH7Q8N100 152 aa8.89□□□□□ -0.99
NUCB1-205ENST00000443560 PLEKHB2Q96CS7 222 aa8.88□□□□□ -0.99
NUCB1-205ENST00000443560 RPL37AP8A6NKH3 93 aa8.87□□□□□ -0.99
NUCB1-205ENST00000443560 E9PLD3 99 aa8.87□□□□□ -0.99
NUCB1-205ENST00000443560 LEPROTO15243 131 aa8.87□□□□□ -0.99
NUCB1-205ENST00000443560 JOSD1Q15040 202 aaPredicted RBP8.87□□□□□ -0.99
NUCB1-205ENST00000443560 LINC00167Q96N53 147 aa8.87□□□□□ -0.99
NUCB1-205ENST00000443560 HSBP1L1C9JCN9 74 aa8.86□□□□□ -0.99
NUCB1-205ENST00000443560 SFTA2Q6UW10 78 aa8.86□□□□□ -0.99
NUCB1-205ENST00000443560 ANAPC11Q9NYG5 84 aa8.86□□□□□ -0.99
NUCB1-205ENST00000443560 GAGE10A6NGK3 116 aa8.85□□□□□ -0.99
NUCB1-205ENST00000443560 J3QQQ9 107 aa8.85□□□□□ -0.99
NUCB1-205ENST00000443560 UBE2AP49459 152 aa8.85□□□□□ -0.99
NUCB1-205ENST00000443560 LCE2AQ5TA79 106 aaPredicted RBP8.85□□□□□ -0.99
NUCB1-205ENST00000443560 RETNLBQ9BQ08 111 aa8.85□□□□□ -0.99
NUCB1-205ENST00000443560 LGALS3P17931 250 aaKnown RBP8.84□□□□□ -0.99
NUCB1-205ENST00000443560 TSPEAR-AS2P59090 65 aa8.83□□□□□ -1
NUCB1-205ENST00000443560 KRTAP13-2Q52LG2 175 aa8.83□□□□□ -1
NUCB1-205ENST00000443560 PYY3Q5JQD4 70 aa8.83□□□□□ -1
NUCB1-205ENST00000443560 LINC00304Q8N9R0 145 aa8.83□□□□□ -1
NUCB1-205ENST00000443560 NKAPP1Q8N9T2 125 aa8.83□□□□□ -1
NUCB1-205ENST00000443560 NDUFA12Q9UI09 145 aa8.83□□□□□ -1
NUCB1-205ENST00000443560 NMUP48645 174 aa8.82□□□□□ -1
NUCB1-205ENST00000443560 FAM229BQ4G0N7 80 aa8.82□□□□□ -1
NUCB1-205ENST00000443560 ANKRD39Q53RE8 183 aa8.82□□□□□ -1
NUCB1-205ENST00000443560 ZNF625Q96I27 306 aaPredicted RBP8.82□□□□□ -1
NUCB1-205ENST00000443560 CDIP1Q9H305 208 aa8.82□□□□□ -1
NUCB1-205ENST00000443560 IGKV2D-26A0A0A0MRZ7 120 aa8.81□□□□□ -1
NUCB1-205ENST00000443560 MYMXA0A1B0GTQ4 84 aa8.81□□□□□ -1
NUCB1-205ENST00000443560 HERV-K104P63124 156 aa8.81□□□□□ -1
NUCB1-205ENST00000443560 IGLV5-37A0A075B6J1 123 aa8.8□□□□□ -1
NUCB1-205ENST00000443560 KRTAP13-1Q8IUC0 172 aa8.8□□□□□ -1
NUCB1-205ENST00000443560 LOC105371267A0A1B0GV96 52 aa8.79□□□□□ -1
NUCB1-205ENST00000443560 VAMP8Q9BV40 100 aa8.79□□□□□ -1
NUCB1-205ENST00000443560 IGLV7-46A0A075B6I9 117 aa8.78□□□□□ -1
NUCB1-205ENST00000443560 IGKV2-28A0A075B6P5 120 aa8.78□□□□□ -1
NUCB1-205ENST00000443560 IGKV2D-28P01615 120 aa8.78□□□□□ -1
NUCB1-205ENST00000443560 TPRXLQ17RH7 258 aa8.78□□□□□ -1
NUCB1-205ENST00000443560 ZNF815PA8K554 130 aa8.77□□□□□ -1.01
NUCB1-205ENST00000443560 LINC00587B1AMM8 73 aa8.77□□□□□ -1.01
NUCB1-205ENST00000443560 ERG28Q9UKR5 140 aa8.77□□□□□ -1.01
NUCB1-205ENST00000443560 PAM16Q9Y3D7 125 aa8.77□□□□□ -1.01
NUCB1-205ENST00000443560 COX17Q14061 63 aa8.76□□□□□ -1.01
NUCB1-205ENST00000443560 SPATA45Q537H7 98 aa8.76□□□□□ -1.01
NUCB1-205ENST00000443560 MEIG1Q5JSS6 88 aa8.76□□□□□ -1.01
NUCB1-205ENST00000443560 TTTY13Q9BZ97 58 aa8.76□□□□□ -1.01
NUCB1-205ENST00000443560 KRTAP9-6A0A140TA67 174 aa8.75□□□□□ -1.01
NUCB1-205ENST00000443560 PFN2P35080 140 aa8.75□□□□□ -1.01
NUCB1-205ENST00000443560 PRLHP81277 87 aa8.75□□□□□ -1.01
NUCB1-205ENST00000443560 FAM19A1Q7Z5A9 133 aa8.75□□□□□ -1.01
NUCB1-205ENST00000443560 PCP2Q8IVA1 136 aa8.75□□□□□ -1.01
NUCB1-205ENST00000443560 A0A0J9YXY3 114 aa8.74□□□□□ -1.01
NUCB1-205ENST00000443560 LINC00158P58513 81 aa8.74□□□□□ -1.01
NUCB1-205ENST00000443560 SMIM6P0DI80 62 aa8.73□□□□□ -1.01
NUCB1-205ENST00000443560 SMIM13P0DJ93 91 aa8.73□□□□□ -1.01
NUCB1-205ENST00000443560 CTAG1AP78358 180 aa8.73□□□□□ -1.01
NUCB1-205ENST00000443560 S100A12P80511 92 aa8.73□□□□□ -1.01
NUCB1-205ENST00000443560 COX8AP10176 69 aa8.72□□□□□ -1.01
NUCB1-205ENST00000443560 SCGB1D4Q6XE38 83 aa8.72□□□□□ -1.01
NUCB1-205ENST00000443560 TMEM126AQ9H061 195 aa8.72□□□□□ -1.01
NUCB1-205ENST00000443560 A0A0U1RRA0 63 aa8.71□□□□□ -1.02
NUCB1-205ENST00000443560 TMEM238C9JI98 176 aa8.71□□□□□ -1.02
NUCB1-205ENST00000443560 TIMM17BO60830 172 aa8.7□□□□□ -1.02
NUCB1-205ENST00000443560 MIR7-3HGQ8N6C7 128 aa8.7□□□□□ -1.02
NUCB1-205ENST00000443560 PPDPFQ9H3Y8 114 aa8.7□□□□□ -1.02
NUCB1-205ENST00000443560 DLEU1O43261 78 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms