RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 H7C2G1 150 aa5.54□□□□□ -1.52
CCDC39-201ENST00000442201 CLEC2BQ92478 149 aa5.54□□□□□ -1.52
CCDC39-201ENST00000442201 LEPROTO15243 131 aa5.53□□□□□ -1.52
CCDC39-201ENST00000442201 INAFM2P0DMQ5 153 aa5.53□□□□□ -1.52
CCDC39-201ENST00000442201 LITAFQ99732 161 aa5.53□□□□□ -1.52
CCDC39-201ENST00000442201 STAB2Q8WWQ8 2551 aa5.53□□□□□ -1.52
CCDC39-201ENST00000442201 IGKV3OR2-268A0A0C4DH90 116 aa5.52□□□□□ -1.53
CCDC39-201ENST00000442201 LINC00242Q5T6M2 205 aa5.52□□□□□ -1.53
CCDC39-201ENST00000442201 BCE1O60756 84 aa5.52□□□□□ -1.53
CCDC39-201ENST00000442201 ESRGQ1W209 222 aa5.52□□□□□ -1.53
CCDC39-201ENST00000442201 FAM19A3Q7Z5A8 133 aa5.52□□□□□ -1.53
CCDC39-201ENST00000442201 XCL1P47992 114 aa5.52□□□□□ -1.53
CCDC39-201ENST00000442201 MEGF8Q7Z7M0 2845 aa5.52□□□□□ -1.53
CCDC39-201ENST00000442201 ANGP03950 147 aaKnown RBP5.51□□□□□ -1.53
CCDC39-201ENST00000442201 PRSS2P07478 247 aa5.51□□□□□ -1.53
CCDC39-201ENST00000442201 KLKP1Q107X0 134 aa5.51□□□□□ -1.53
CCDC39-201ENST00000442201 CDKN2A-AS1Q9UH64 79 aa5.51□□□□□ -1.53
CCDC39-201ENST00000442201 HUWE1Q7Z6Z7 4374 aaKnown RBP5.51□□□□□ -1.53
CCDC39-201ENST00000442201 IGLV5-45A0A087WSX0 123 aa5.51□□□□□ -1.53
CCDC39-201ENST00000442201 LGALS3P17931 250 aaKnown RBP5.51□□□□□ -1.53
CCDC39-201ENST00000442201 TRBV7-6A0A0J9YX20 115 aa5.5□□□□□ -1.53
CCDC39-201ENST00000442201 ATP5EP56381 51 aaPredicted RBP5.5□□□□□ -1.53
CCDC39-201ENST00000442201 COX6A2Q02221 97 aa5.5□□□□□ -1.53
CCDC39-201ENST00000442201 LINC00269Q8N2A0 174 aa5.5□□□□□ -1.53
CCDC39-201ENST00000442201 Q8N3U1 123 aa5.5□□□□□ -1.53
CCDC39-201ENST00000442201 TRAV8-3A0A0A6YYJ7 113 aa5.5□□□□□ -1.53
CCDC39-201ENST00000442201 LINC00959A0A1B0GUT2 108 aa5.5□□□□□ -1.53
CCDC39-201ENST00000442201 C4orf48Q5BLP8 95 aa5.5□□□□□ -1.53
CCDC39-201ENST00000442201 WFDC10BQ8IUB3 73 aa5.5□□□□□ -1.53
CCDC39-201ENST00000442201 LAMTOR3Q9UHA4 124 aa5.5□□□□□ -1.53
CCDC39-201ENST00000442201 IGHV3-64A0A075B6Q5 118 aa5.5□□□□□ -1.53
CCDC39-201ENST00000442201 SS18Q15532 418 aa5.5□□□□□ -1.53
CCDC39-201ENST00000442201 CLPSL2Q6UWE3 100 aa5.5□□□□□ -1.53
CCDC39-201ENST00000442201 REG3AQ06141 175 aa5.49□□□□□ -1.53
CCDC39-201ENST00000442201 IGHV1-58A0A0C4DH39 117 aa5.49□□□□□ -1.53
CCDC39-201ENST00000442201 CCKP06307 115 aa5.49□□□□□ -1.53
CCDC39-201ENST00000442201 CCL18P55774 89 aa5.49□□□□□ -1.53
CCDC39-201ENST00000442201 A0A0J9YXY3 114 aa5.49□□□□□ -1.53
CCDC39-201ENST00000442201 IGHV3-30-3P0DP02 117 aa5.49□□□□□ -1.53
CCDC39-201ENST00000442201 OBSCN-AS1Q96MR7 158 aa5.49□□□□□ -1.53
CCDC39-201ENST00000442201 KLK12Q9UKR0 248 aa5.49□□□□□ -1.53
CCDC39-201ENST00000442201 COL7A1Q02388 2944 aa5.48□□□□□ -1.53
CCDC39-201ENST00000442201 A0A087WVE0 104 aa5.48□□□□□ -1.53
CCDC39-201ENST00000442201 COX7A2LO14548 114 aa5.48□□□□□ -1.53
CCDC39-201ENST00000442201 DNAH9Q9NYC9 4486 aa5.48□□□□□ -1.53
CCDC39-201ENST00000442201 IBA57-AS1B1ANH7 110 aa5.48□□□□□ -1.53
CCDC39-201ENST00000442201 LINC00474Q9P2X8 69 aa5.48□□□□□ -1.53
CCDC39-201ENST00000442201 IGHV3OR16-9A0A0B4J2B5 98 aa5.47□□□□□ -1.53
CCDC39-201ENST00000442201 PRR34Q9NV39 138 aa5.47□□□□□ -1.53
CCDC39-201ENST00000442201 SMIM1B2RUZ4 78 aa5.47□□□□□ -1.53
CCDC39-201ENST00000442201 GHRHP01286 108 aa5.47□□□□□ -1.53
CCDC39-201ENST00000442201 CRPP02741 224 aa5.47□□□□□ -1.53
CCDC39-201ENST00000442201 LINC01556Q5JQF7 62 aa5.47□□□□□ -1.53
CCDC39-201ENST00000442201 LINC00588Q9Y4M8 146 aa5.47□□□□□ -1.53
CCDC39-201ENST00000442201 IGLV5-39A0A0G2JS06 123 aa5.47□□□□□ -1.53
CCDC39-201ENST00000442201 MIAQ16674 131 aa5.47□□□□□ -1.53
CCDC39-201ENST00000442201 IGLV10-54A0A075B6I4 117 aa5.46□□□□□ -1.54
CCDC39-201ENST00000442201 NUPR2A6NF83 97 aa5.46□□□□□ -1.54
CCDC39-201ENST00000442201 ATP5EP2Q5VTU8 51 aa5.46□□□□□ -1.54
CCDC39-201ENST00000442201 CHCHD10Q8WYQ3 142 aaPredicted RBP5.46□□□□□ -1.54
CCDC39-201ENST00000442201 A0A087WZ39 114 aa5.46□□□□□ -1.54
CCDC39-201ENST00000442201 ADAMTSL4-AS1Q5T5F5 129 aa5.46□□□□□ -1.54
CCDC39-201ENST00000442201 CD164L2Q6UWJ8 174 aa5.46□□□□□ -1.54
CCDC39-201ENST00000442201 C20orf197Q8N268 126 aa5.46□□□□□ -1.54
CCDC39-201ENST00000442201 DNAH10OSP0CZ25 163 aa5.45□□□□□ -1.54
CCDC39-201ENST00000442201 ENHOQ6UWT2 76 aa5.45□□□□□ -1.54
CCDC39-201ENST00000442201 IGKV3D-7A0A0C4DH55 119 aa5.45□□□□□ -1.54
CCDC39-201ENST00000442201 TRBV10-3A0A0K0K1G6 114 aa5.45□□□□□ -1.54
CCDC39-201ENST00000442201 BAALC-AS2P0C853 105 aa5.45□□□□□ -1.54
CCDC39-201ENST00000442201 NDUFA12Q9UI09 145 aa5.45□□□□□ -1.54
CCDC39-201ENST00000442201 TIMM17BO60830 172 aa5.45□□□□□ -1.54
CCDC39-201ENST00000442201 LINC00846Q9NV44 126 aa5.45□□□□□ -1.54
CCDC39-201ENST00000442201 APLNQ9ULZ1 77 aa5.45□□□□□ -1.54
CCDC39-201ENST00000442201 TRAV7A0A075B6U4 112 aa5.44□□□□□ -1.54
CCDC39-201ENST00000442201 NDUFC1O43677 76 aa5.44□□□□□ -1.54
CCDC39-201ENST00000442201 RPL28P46779 137 aaKnown RBP5.44□□□□□ -1.54
CCDC39-201ENST00000442201 TOMM7Q9P0U1 55 aa5.43□□□□□ -1.54
CCDC39-201ENST00000442201 FBN3Q75N90 2809 aa5.43□□□□□ -1.54
CCDC39-201ENST00000442201 TRAV13-2A0A0B4J235 113 aa5.43□□□□□ -1.54
CCDC39-201ENST00000442201 CIRBPQ14011 172 aaKnown RBP5.43□□□□□ -1.54
CCDC39-201ENST00000442201 UBE2DNLQ8IWF7 75 aa5.43□□□□□ -1.54
CCDC39-201ENST00000442201 COX7B2Q8TF08 81 aa5.43□□□□□ -1.54
CCDC39-201ENST00000442201 NDUFA1O15239 70 aa5.42□□□□□ -1.54
CCDC39-201ENST00000442201 Q9H8V8 135 aa5.42□□□□□ -1.54
CCDC39-201ENST00000442201 PRKDCP78527 4128 aaKnown RBP5.42□□□□□ -1.54
CCDC39-201ENST00000442201 DNAL4O96015 105 aa5.42□□□□□ -1.54
CCDC39-201ENST00000442201 ZNF625Q96I27 306 aaPredicted RBP5.41□□□□□ -1.54
CCDC39-201ENST00000442201 Q8IZM0 81 aa5.4□□□□□ -1.54
CCDC39-201ENST00000442201 Q9HAA7 133 aa5.4□□□□□ -1.54
CCDC39-201ENST00000442201 IGKV2D-24A0A075B6R9 120 aa5.4□□□□□ -1.55
CCDC39-201ENST00000442201 S100A7L2Q5SY68 101 aa5.4□□□□□ -1.55
CCDC39-201ENST00000442201 F8WEM9 126 aa5.4□□□□□ -1.55
CCDC39-201ENST00000442201 FAM229BQ4G0N7 80 aa5.4□□□□□ -1.55
CCDC39-201ENST00000442201 RBM3P98179 157 aaKnown RBP5.39□□□□□ -1.55
CCDC39-201ENST00000442201 KRTAP26-1Q6PEX3 210 aa5.39□□□□□ -1.55
CCDC39-201ENST00000442201 MRPL55Q7Z7F7 128 aaKnown RBP5.39□□□□□ -1.55
CCDC39-201ENST00000442201 MUC7Q8TAX7 377 aa5.39□□□□□ -1.55
CCDC39-201ENST00000442201 C6orf223Q8N319 242 aa5.38□□□□□ -1.55
CCDC39-201ENST00000442201 RMI2Q96E14 147 aa5.38□□□□□ -1.55
CCDC39-201ENST00000442201 FAM218AQ96MZ4 157 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms