RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 CIRBP-AS1Q8TBR5 109 aa3.88□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 SNURFQ9Y675 71 aa3.88□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 HRNRQ86YZ3 2850 aaPredicted RBP3.88□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 RELNP78509 3460 aa3.88□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 IGKV2-40A0A087WW87 121 aaPredicted RBP3.88□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 A6NDX4 124 aa3.88□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 ERC2-IT1O76042 136 aa3.88□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 IGKV2D-40P01614 121 aaPredicted RBP3.88□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 Q8N9W7 124 aa3.88□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 C14orf132Q9NPU4 83 aa3.88□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 MED13LQ71F56 2210 aa3.87□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 TRAV22A0A0B4J277 110 aa3.87□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 I3L2K1 104 aa3.87□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 TLX1NBP0CAT3 122 aa3.87□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 AKAP6Q13023 2319 aa3.87□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 ENHOQ6UWT2 76 aa3.86□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 RPL39LQ96EH5 51 aaKnown RBP3.86□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 ODF3BA8MYP8 253 aa3.86□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 Q6ZQT0 140 aa3.86□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 Q8TAT8 98 aa3.86□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 SPTAN1Q13813 2472 aaKnown RBP3.85□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 A0A0J9YWU9 116 aa3.85□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 CHKB-CPT1BH3BT56 60 aa3.85□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 K7EIM0 57 aa3.85□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 IGKV1-17P01599 117 aa3.85□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 MINOS1Q5TGZ0 78 aa3.85□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 MINOS1-NBL1R4GNA1 71 aa3.85□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 IGHV3-64A0A075B6Q5 118 aa3.85□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 TRBV7-4A0A0J9YYF1 115 aa3.85□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 HIGD2BQ4VC39 106 aa3.85□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 NTM-AS1Q6ZSK4 140 aa3.85□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 LIMD2Q9BT23 127 aa3.85□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 POLR2KP53803 58 aaKnown RBP3.84□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 RPL39P62891 51 aaKnown RBP3.84□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 LCE5AQ5TCM9 118 aa3.84□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 Q6ZTC4 211 aa3.84□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 MIR7-3HGQ8N6C7 128 aa3.84□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 WFDC9Q8NEX5 89 aa3.84□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 C16orf74Q96GX8 76 aa3.84□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 UBL5Q9BZL1 73 aa3.84□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 CACNA1BQ00975 2339 aa3.84□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 ASH1LQ9NR48 2969 aaKnown RBP3.84□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 PIEZO1Q92508 2521 aa3.84□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 ITPR1Q14643 2758 aa3.83□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 Q8N9P0 234 aaPredicted RBP3.83□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 MGPP08493 103 aa3.83□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 NDPQ00604 133 aa3.83□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 C15orf56Q8N910 161 aa3.83□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 MUC7Q8TAX7 377 aa3.83□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 LINC00308Q8TCZ7 52 aa3.83□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 S4R3C0 116 aa3.83□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.82□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 JMJD7-PLA2G4BH0Y9G9 81 aa3.82□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 H0YGX0 51 aa3.82□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 NDUFA1O15239 70 aa3.82□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 CTSGP08311 255 aa3.82□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 C9orf129Q5T035 196 aaKnown RBP3.82□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 Q5VV11 94 aa3.82□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 TMEM254Q8TBM7 123 aa3.82□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 ZNF625Q96I27 306 aaPredicted RBP3.82□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 KMT2BQ9UMN6 2715 aaPredicted RBP3.82□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 TRAV10A0A0B4J240 114 aa3.82□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 KRTAP9-7A8MTY7 169 aa3.82□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 MOBPQ13875 183 aa3.82□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 TRBV6-5A0A0K0K1A5 114 aa3.81□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 H3BPC8 53 aa3.81□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 GIG44P09565 113 aaPredicted RBP3.81□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 DNAH10OSP0CZ25 163 aa3.81□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 KRTAP24-1Q3LI83 254 aa3.81□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 NCR3O14931 201 aa3.8□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 ORMDL1Q9P0S3 153 aa3.8□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 SPG11Q96JI7 2443 aa3.8□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 MIR22HGQ0VDD5 57 aa3.8□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 NREPQ16612 68 aa3.8□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 TYMSOSQ8TAI1 123 aa3.8□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 MAP1AP78559 2803 aaPredicted RBP3.79□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 CSMD1Q96PZ7 3565 aa3.79□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 TRAV21A0A0B4J279 112 aa3.79□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 A8MUU9 505 aa3.79□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 KLK9Q2XQG4 91 aa3.79□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 KLK9Q9UKQ9 250 aa3.79□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 LENEPQ9Y5L5 61 aa3.79□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 KIF25-AS1Q9Y6Z4 181 aa3.79□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 CFAP46Q8IYW2 2715 aa3.78□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.78□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 ABCA2Q9BZC7 2435 aa3.78□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 A0A087WYN8 130 aa3.78□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 C5orf56Q8N8D9 126 aa3.78□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 CCL19Q99731 98 aa3.78□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 COL12A1Q99715 3063 aa3.78□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 MYO18BQ8IUG5 2567 aa3.78□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 FLNCQ14315 2725 aa3.78□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 DOPEY1Q5JWR5 2465 aa3.78□□□□□ -1.8
ALMS1-IT1-201ENST00000441587 IGHV3OR16-8A0A075B7F1 116 aa3.77□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 G3V318 75 aa3.77□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 ACACBO00763 2458 aa3.77□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 LINC00315P59091 139 aa3.77□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 LINC00167Q96N53 147 aa3.77□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 SVEP1Q4LDE5 3571 aa3.77□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 IGSF10Q6WRI0 2623 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms