RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 PLNP26678 52 aa14.32□□□□□ -0.12
VARS-217ENST00000440048 LINC00158P58513 81 aa14.31□□□□□ -0.12
VARS-217ENST00000440048 PMCHL2Q9BQD1 86 aa14.31□□□□□ -0.12
VARS-217ENST00000440048 DPM2O94777 84 aa14.3□□□□□ -0.12
VARS-217ENST00000440048 VPREB1P12018 145 aa14.3□□□□□ -0.12
VARS-217ENST00000440048 A0A0U1RRA0 63 aa14.29□□□□□ -0.12
VARS-217ENST00000440048 MAP1LC3CQ9BXW4 147 aa14.29□□□□□ -0.12
VARS-217ENST00000440048 ZNF861PO60384 105 aa14.28□□□□□ -0.12
VARS-217ENST00000440048 NDUFA12Q9UI09 145 aa14.28□□□□□ -0.12
VARS-217ENST00000440048 BCE1O60756 84 aa14.27□□□□□ -0.13
VARS-217ENST00000440048 SMIM13P0DJ93 91 aa14.27□□□□□ -0.13
VARS-217ENST00000440048 HERV-K104P63124 156 aa14.27□□□□□ -0.13
VARS-217ENST00000440048 RPL24P83731 157 aaKnown RBP14.27□□□□□ -0.13
VARS-217ENST00000440048 Q8NDZ9 215 aa14.27□□□□□ -0.13
VARS-217ENST00000440048 LEPROTO15243 131 aa14.26□□□□□ -0.13
VARS-217ENST00000440048 IGKCP01834 107 aa14.26□□□□□ -0.13
VARS-217ENST00000440048 TSPEAR-AS2P59090 65 aa14.26□□□□□ -0.13
VARS-217ENST00000440048 MYMXA0A1B0GTQ4 84 aa14.25□□□□□ -0.13
VARS-217ENST00000440048 MEIG1Q5JSS6 88 aa14.25□□□□□ -0.13
VARS-217ENST00000440048 PLEKHB2Q96CS7 222 aa14.25□□□□□ -0.13
VARS-217ENST00000440048 IGKV2-28A0A075B6P5 120 aa14.23□□□□□ -0.13
VARS-217ENST00000440048 IGKV2D-28P01615 120 aa14.23□□□□□ -0.13
VARS-217ENST00000440048 KRTAP1-4P0C5Y4 121 aa14.23□□□□□ -0.13
VARS-217ENST00000440048 HERVK_113P61574 105 aa14.23□□□□□ -0.13
VARS-217ENST00000440048 ATP6V1G1O75348 118 aa14.22□□□□□ -0.13
VARS-217ENST00000440048 IGLV1-50A0A075B6I6 118 aa14.21□□□□□ -0.13
VARS-217ENST00000440048 SYS1-DBNDD2H3BUS1 97 aa14.21□□□□□ -0.13
VARS-217ENST00000440048 J3QQQ9 107 aa14.21□□□□□ -0.13
VARS-217ENST00000440048 RPL28P46779 137 aaKnown RBP14.21□□□□□ -0.13
VARS-217ENST00000440048 PRR26Q8N8Z3 221 aa14.21□□□□□ -0.13
VARS-217ENST00000440048 LINC00587B1AMM8 73 aa14.2□□□□□ -0.14
VARS-217ENST00000440048 MIR7-3HGQ8N6C7 128 aa14.2□□□□□ -0.14
VARS-217ENST00000440048 COA6Q5JTJ3 125 aaKnown RBP14.19□□□□□ -0.14
VARS-217ENST00000440048 LGALS3P17931 250 aaKnown RBP14.16□□□□□ -0.14
VARS-217ENST00000440048 KRTAP13-1Q8IUC0 172 aa14.16□□□□□ -0.14
VARS-217ENST00000440048 BOD1L2Q8IYS8 172 aa14.16□□□□□ -0.14
VARS-217ENST00000440048 TMEM238C9JI98 176 aa14.15□□□□□ -0.14
VARS-217ENST00000440048 NMUP48645 174 aa14.15□□□□□ -0.14
VARS-217ENST00000440048 UBE2AP49459 152 aa14.15□□□□□ -0.14
VARS-217ENST00000440048 TMEM126AQ9H061 195 aa14.15□□□□□ -0.14
VARS-217ENST00000440048 M0R378 163 aa14.14□□□□□ -0.15
VARS-217ENST00000440048 LINC01545Q5VT33 79 aa14.14□□□□□ -0.15
VARS-217ENST00000440048 PET117Q6UWS5 81 aa14.14□□□□□ -0.15
VARS-217ENST00000440048 E9PLD3 99 aa14.13□□□□□ -0.15
VARS-217ENST00000440048 UBR4Q5T4S7 5183 aa14.13□□□□□ -0.15
VARS-217ENST00000440048 DAND5Q8N907 189 aa14.12□□□□□ -0.15
VARS-217ENST00000440048 C3orf79P0CE67 100 aa14.11□□□□□ -0.15
VARS-217ENST00000440048 S100A1P23297 94 aa14.1□□□□□ -0.15
VARS-217ENST00000440048 FAM19A1Q7Z5A9 133 aa14.1□□□□□ -0.15
VARS-217ENST00000440048 NCR3O14931 201 aa14.09□□□□□ -0.15
VARS-217ENST00000440048 PRLHP81277 87 aa14.09□□□□□ -0.15
VARS-217ENST00000440048 IGKV2D-26A0A0A0MRZ7 120 aa14.07□□□□□ -0.16
VARS-217ENST00000440048 LOC107984156A0A0G2JMH3 177 aa14.07□□□□□ -0.16
VARS-217ENST00000440048 RPL13AP40429 203 aaKnown RBP14.07□□□□□ -0.16
VARS-217ENST00000440048 KRTDAPP60985 99 aa14.07□□□□□ -0.16
VARS-217ENST00000440048 ARL17AQ8IVW1 177 aa14.07□□□□□ -0.16
VARS-217ENST00000440048 A0A0J9YXY3 114 aa14.05□□□□□ -0.16
VARS-217ENST00000440048 A0A087X002 238 aa14.02□□□□□ -0.17
VARS-217ENST00000440048 PRYO14603 147 aa14.02□□□□□ -0.17
VARS-217ENST00000440048 TRBV10-3A0A0K0K1G6 114 aa14.01□□□□□ -0.17
VARS-217ENST00000440048 ADAMTSL4-AS1Q5T5F5 129 aa14.01□□□□□ -0.17
VARS-217ENST00000440048 MIEN1Q9BRT3 115 aa14.01□□□□□ -0.17
VARS-217ENST00000440048 KCNQ1DNQ9H478 68 aa14.01□□□□□ -0.17
VARS-217ENST00000440048 ANAPC11Q9NYG5 84 aa14.01□□□□□ -0.17
VARS-217ENST00000440048 CRYGAP11844 174 aa13.99□□□□□ -0.17
VARS-217ENST00000440048 TRBV10-2A0A0K0K1G8 114 aa13.98□□□□□ -0.17
VARS-217ENST00000440048 SOSTDC1Q6X4U4 206 aa13.98□□□□□ -0.17
VARS-217ENST00000440048 C20orf202A1L168 122 aa13.97□□□□□ -0.17
VARS-217ENST00000440048 EIF4EBP3O60516 100 aaPredicted RBP13.97□□□□□ -0.17
VARS-217ENST00000440048 SPRR1AP35321 89 aa13.97□□□□□ -0.17
VARS-217ENST00000440048 NPC2P61916 151 aa13.97□□□□□ -0.17
VARS-217ENST00000440048 HIGD2AQ9BW72 106 aa13.97□□□□□ -0.17
VARS-217ENST00000440048 SPANXB1Q9NS25 103 aaPredicted RBP13.97□□□□□ -0.17
VARS-217ENST00000440048 LRP2P98164 4655 aa13.97□□□□□ -0.17
VARS-217ENST00000440048 ZNF815PA8K554 130 aa13.96□□□□□ -0.17
VARS-217ENST00000440048 NDUFC2O95298 119 aa13.96□□□□□ -0.17
VARS-217ENST00000440048 LINC00337Q8N6G1 96 aa13.96□□□□□ -0.17
VARS-217ENST00000440048 TTTY13Q9BZ97 58 aa13.96□□□□□ -0.17
VARS-217ENST00000440048 LITAFQ99732 161 aa13.95□□□□□ -0.18
VARS-217ENST00000440048 KRTAP4-16G5E9R7 235 aaPredicted RBP13.94□□□□□ -0.18
VARS-217ENST00000440048 TIMM17BO60830 172 aa13.94□□□□□ -0.18
VARS-217ENST00000440048 DDTP30046 118 aa13.94□□□□□ -0.18
VARS-217ENST00000440048 FAM229BQ4G0N7 80 aa13.94□□□□□ -0.18
VARS-217ENST00000440048 TYMSOSQ8TAI1 123 aa13.93□□□□□ -0.18
VARS-217ENST00000440048 ETDCA0A1B0GVM5 59 aa13.92□□□□□ -0.18
VARS-217ENST00000440048 S100A12P80511 92 aa13.92□□□□□ -0.18
VARS-217ENST00000440048 KRTAP13-2Q52LG2 175 aa13.92□□□□□ -0.18
VARS-217ENST00000440048 ATOH7Q8N100 152 aa13.92□□□□□ -0.18
VARS-217ENST00000440048 HIST3H2BBQ8N257 126 aa13.92□□□□□ -0.18
VARS-217ENST00000440048 ANKRD39Q53RE8 183 aa13.91□□□□□ -0.18
VARS-217ENST00000440048 LINC00308Q8TCZ7 52 aa13.9□□□□□ -0.18
VARS-217ENST00000440048 IGLV6-57P01721 117 aa13.89□□□□□ -0.19
VARS-217ENST00000440048 S100A7L2Q5SY68 101 aa13.89□□□□□ -0.19
VARS-217ENST00000440048 HIST1H2BLQ99880 126 aa13.88□□□□□ -0.19
VARS-217ENST00000440048 S100A2P29034 98 aa13.87□□□□□ -0.19
VARS-217ENST00000440048 AKR1D1P51857 326 aa13.87□□□□□ -0.19
VARS-217ENST00000440048 SPRR4Q96PI1 79 aa13.87□□□□□ -0.19
VARS-217ENST00000440048 B5MCH6 92 aa13.86□□□□□ -0.19
VARS-217ENST00000440048 SMCR5Q8TEV8 140 aa13.86□□□□□ -0.19
VARS-217ENST00000440048 SPANXCQ9NY87 97 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 167.5 ms