RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 ENHOQ6UWT2 76 aa9.16□□□□□ -0.94
HERPUD1-204ENST00000439977 NDUFC2O95298 119 aa9.15□□□□□ -0.94
HERPUD1-204ENST00000439977 HIST1H4AP62805 103 aaKnown RBP9.15□□□□□ -0.94
HERPUD1-204ENST00000439977 MIFP14174 115 aa9.15□□□□□ -0.94
HERPUD1-204ENST00000439977 HIGD2BQ4VC39 106 aa9.15□□□□□ -0.95
HERPUD1-204ENST00000439977 LELP1Q5T871 98 aa9.15□□□□□ -0.95
HERPUD1-204ENST00000439977 CCKP06307 115 aa9.14□□□□□ -0.95
HERPUD1-204ENST00000439977 TMEM256-PLSCR3K7ERE1 68 aa9.13□□□□□ -0.95
HERPUD1-204ENST00000439977 OXLD1Q5BKU9 147 aa9.13□□□□□ -0.95
HERPUD1-204ENST00000439977 C3orf22Q8N5N4 141 aa9.13□□□□□ -0.95
HERPUD1-204ENST00000439977 ANK2Q01484 3957 aa9.12□□□□□ -0.95
HERPUD1-204ENST00000439977 LYPD5Q6UWN5 251 aa9.12□□□□□ -0.95
HERPUD1-204ENST00000439977 WFDC10BQ8IUB3 73 aa9.12□□□□□ -0.95
HERPUD1-204ENST00000439977 TENM3Q9P273 2699 aa9.12□□□□□ -0.95
HERPUD1-204ENST00000439977 A0A1B0GX51 115 aa9.11□□□□□ -0.95
HERPUD1-204ENST00000439977 LINC00575Q6W349 94 aa9.11□□□□□ -0.95
HERPUD1-204ENST00000439977 LINC00167Q96N53 147 aa9.11□□□□□ -0.95
HERPUD1-204ENST00000439977 C6orf48Q9UBA6 75 aa9.11□□□□□ -0.95
HERPUD1-204ENST00000439977 LAMTOR3Q9UHA4 124 aa9.11□□□□□ -0.95
HERPUD1-204ENST00000439977 hADV29S1A0JD25 119 aa9.1□□□□□ -0.95
HERPUD1-204ENST00000439977 M0R2N4 97 aa9.1□□□□□ -0.95
HERPUD1-204ENST00000439977 Q6JHZ5 121 aa9.1□□□□□ -0.95
HERPUD1-204ENST00000439977 PRR34Q9NV39 138 aa9.1□□□□□ -0.95
HERPUD1-204ENST00000439977 FBN1P35555 2871 aaKnown RBP9.1□□□□□ -0.95
HERPUD1-204ENST00000439977 STAB1Q9NY15 2570 aa9.1□□□□□ -0.95
HERPUD1-204ENST00000439977 TRBV10-3A0A0K0K1G6 114 aa9.1□□□□□ -0.95
HERPUD1-204ENST00000439977 JMJD7-PLA2G4BH0Y9G9 81 aa9.1□□□□□ -0.95
HERPUD1-204ENST00000439977 UQCRQO14949 82 aa9.1□□□□□ -0.95
HERPUD1-204ENST00000439977 Q6ZQY7 126 aa9.09□□□□□ -0.95
HERPUD1-204ENST00000439977 CYSTM1Q9H1C7 97 aa9.09□□□□□ -0.95
HERPUD1-204ENST00000439977 FLNBO75369 2602 aaKnown RBP9.08□□□□□ -0.96
HERPUD1-204ENST00000439977 FAM19A1Q7Z5A9 133 aa9.08□□□□□ -0.96
HERPUD1-204ENST00000439977 C2orf48Q96LS8 159 aa9.08□□□□□ -0.96
HERPUD1-204ENST00000439977 A0A0J9YWU9 116 aa9.08□□□□□ -0.96
HERPUD1-204ENST00000439977 COX7CP15954 63 aa9.08□□□□□ -0.96
HERPUD1-204ENST00000439977 NOTCH1P46531 2555 aa9.08□□□□□ -0.96
HERPUD1-204ENST00000439977 MAST4O15021 2626 aa9.07□□□□□ -0.96
HERPUD1-204ENST00000439977 Q6ZTC4 211 aa9.07□□□□□ -0.96
HERPUD1-204ENST00000439977 USP17L23D6RBM5 183 aa9.07□□□□□ -0.96
HERPUD1-204ENST00000439977 KPRPQ5T749 579 aaPredicted RBP9.07□□□□□ -0.96
HERPUD1-204ENST00000439977 TRAV23DV6A0A075B6W5 121 aa9.06□□□□□ -0.96
HERPUD1-204ENST00000439977 ZNF561-AS1K7EIQ3 104 aa9.06□□□□□ -0.96
HERPUD1-204ENST00000439977 ATOX1O00244 68 aa9.06□□□□□ -0.96
HERPUD1-204ENST00000439977 IGLV6-57P01721 117 aa9.06□□□□□ -0.96
HERPUD1-204ENST00000439977 RBM3P98179 157 aaKnown RBP9.06□□□□□ -0.96
HERPUD1-204ENST00000439977 CAMK2N2Q96S95 79 aa9.06□□□□□ -0.96
HERPUD1-204ENST00000439977 F8P00451 2351 aa9.05□□□□□ -0.96
HERPUD1-204ENST00000439977 KRTAP10-11P60412 298 aa9.03□□□□□ -0.96
HERPUD1-204ENST00000439977 Q6ZRU5 148 aa9.03□□□□□ -0.96
HERPUD1-204ENST00000439977 UBL5Q9BZL1 73 aa9.02□□□□□ -0.96
HERPUD1-204ENST00000439977 Q6ZQT0 140 aa9.02□□□□□ -0.97
HERPUD1-204ENST00000439977 DIRC1Q969H9 104 aa9.02□□□□□ -0.97
HERPUD1-204ENST00000439977 HAMPP81172 84 aa9.01□□□□□ -0.97
HERPUD1-204ENST00000439977 ESRGQ1W209 222 aa9.01□□□□□ -0.97
HERPUD1-204ENST00000439977 ZNF73O43830 326 aaPredicted RBP9.01□□□□□ -0.97
HERPUD1-204ENST00000439977 LOC107984640A0A0U1RRK4 108 aa9.01□□□□□ -0.97
HERPUD1-204ENST00000439977 DSCR8Q96T75 97 aa9□□□□□ -0.97
HERPUD1-204ENST00000439977 IGKV2D-24A0A075B6R9 120 aa8.99□□□□□ -0.97
HERPUD1-204ENST00000439977 SERP2Q8N6R1 65 aa8.99□□□□□ -0.97
HERPUD1-204ENST00000439977 UPK3BQ9BT76 320 aa8.99□□□□□ -0.97
HERPUD1-204ENST00000439977 GVQW2A0A096LPI5 108 aaPredicted RBP8.98□□□□□ -0.97
HERPUD1-204ENST00000439977 GHRHP01286 108 aa8.98□□□□□ -0.97
HERPUD1-204ENST00000439977 SCXQ7RTU7 201 aa8.98□□□□□ -0.97
HERPUD1-204ENST00000439977 C15orf56Q8N910 161 aa8.98□□□□□ -0.97
HERPUD1-204ENST00000439977 CRYGAP11844 174 aa8.98□□□□□ -0.97
HERPUD1-204ENST00000439977 VPREB1P12018 145 aa8.98□□□□□ -0.97
HERPUD1-204ENST00000439977 COX7BP24311 80 aa8.98□□□□□ -0.97
HERPUD1-204ENST00000439977 KRTAP26-1Q6PEX3 210 aa8.97□□□□□ -0.97
HERPUD1-204ENST00000439977 Q6ZRP5 223 aa8.96□□□□□ -0.97
HERPUD1-204ENST00000439977 C1orf43Q9BWL3 253 aa8.96□□□□□ -0.98
HERPUD1-204ENST00000439977 Q6ZVQ6 151 aa8.95□□□□□ -0.98
HERPUD1-204ENST00000439977 LINC01547P58512 204 aaPredicted RBP8.94□□□□□ -0.98
HERPUD1-204ENST00000439977 MUC7Q8TAX7 377 aa8.94□□□□□ -0.98
HERPUD1-204ENST00000439977 DEFB131BA0A096LNP1 70 aa8.94□□□□□ -0.98
HERPUD1-204ENST00000439977 PRB2P02812 416 aaPredicted RBP8.94□□□□□ -0.98
HERPUD1-204ENST00000439977 BAHCC1Q9P281 2608 aa8.94□□□□□ -0.98
HERPUD1-204ENST00000439977 NDUFC2-KCTD14E9PQ53 114 aa8.94□□□□□ -0.98
HERPUD1-204ENST00000439977 ELOF1P60002 83 aaKnown RBP8.94□□□□□ -0.98
HERPUD1-204ENST00000439977 EGFEM1PQ0D2K5 195 aa8.94□□□□□ -0.98
HERPUD1-204ENST00000439977 LOC110117498A0A087WWA1 95 aa8.93□□□□□ -0.98
HERPUD1-204ENST00000439977 WIPF1O43516 503 aa8.93□□□□□ -0.98
HERPUD1-204ENST00000439977 DEFB105AQ8NG35 78 aa8.93□□□□□ -0.98
HERPUD1-204ENST00000439977 ATP5EP2Q5VTU8 51 aa8.92□□□□□ -0.98
HERPUD1-204ENST00000439977 M0R378 163 aa8.91□□□□□ -0.98
HERPUD1-204ENST00000439977 NBEAL1Q6ZS30 2694 aa8.91□□□□□ -0.98
HERPUD1-204ENST00000439977 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.91□□□□□ -0.98
HERPUD1-204ENST00000439977 C20orf197Q8N268 126 aa8.91□□□□□ -0.98
HERPUD1-204ENST00000439977 C11orf45Q8TAV5 145 aa8.91□□□□□ -0.98
HERPUD1-204ENST00000439977 COL6A5A8TX70 2615 aa8.91□□□□□ -0.98
HERPUD1-204ENST00000439977 TRAV10A0A0B4J240 114 aa8.9□□□□□ -0.99
HERPUD1-204ENST00000439977 SERTAD4-AS1Q5TG53 156 aa8.89□□□□□ -0.99
HERPUD1-204ENST00000439977 RPL37AP8A6NKH3 93 aa8.89□□□□□ -0.99
HERPUD1-204ENST00000439977 SYCNQ0VAF6 134 aa8.89□□□□□ -0.99
HERPUD1-204ENST00000439977 CASC10Q5T4H9 136 aa8.88□□□□□ -0.99
HERPUD1-204ENST00000439977 H3BNG1 76 aa8.88□□□□□ -0.99
HERPUD1-204ENST00000439977 LINC00528Q8N1L1 170 aa8.88□□□□□ -0.99
HERPUD1-204ENST00000439977 KRTAP24-1Q3LI83 254 aa8.87□□□□□ -0.99
HERPUD1-204ENST00000439977 Q8N9L7 120 aa8.87□□□□□ -0.99
HERPUD1-204ENST00000439977 TRBV7-4A0A0J9YYF1 115 aa8.87□□□□□ -0.99
HERPUD1-204ENST00000439977 FAM168BA1KXE4 195 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms