RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 TMEM223A0PJW6 202 aa11.11□□□□□ -0.63
CCDC78-204ENST00000439619 FAM229BQ4G0N7 80 aa11.11□□□□□ -0.63
CCDC78-204ENST00000439619 PRLHP81277 87 aa11.1□□□□□ -0.63
CCDC78-204ENST00000439619 IGKV2D-26A0A0A0MRZ7 120 aa11.09□□□□□ -0.63
CCDC78-204ENST00000439619 LINC00587B1AMM8 73 aa11.09□□□□□ -0.63
CCDC78-204ENST00000439619 RNF213Q63HN8 5207 aa11.08□□□□□ -0.64
CCDC78-204ENST00000439619 TMEM238C9JI98 176 aa11.08□□□□□ -0.64
CCDC78-204ENST00000439619 MEIG1Q5JSS6 88 aa11.08□□□□□ -0.64
CCDC78-204ENST00000439619 YPEL4Q96NS1 127 aa11.08□□□□□ -0.64
CCDC78-204ENST00000439619 ANAPC11Q9NYG5 84 aa11.08□□□□□ -0.64
CCDC78-204ENST00000439619 A0A0U1RRA0 63 aa11.07□□□□□ -0.64
CCDC78-204ENST00000439619 HERV-K104P63124 156 aa11.07□□□□□ -0.64
CCDC78-204ENST00000439619 M0R378 163 aa11.06□□□□□ -0.64
CCDC78-204ENST00000439619 CBLN2Q8IUK8 224 aa11.06□□□□□ -0.64
CCDC78-204ENST00000439619 MAP1LC3CQ9BXW4 147 aa11.05□□□□□ -0.64
CCDC78-204ENST00000439619 FAM19A2Q8N3H0 131 aa11.04□□□□□ -0.64
CCDC78-204ENST00000439619 H0Y8G0 127 aa11.03□□□□□ -0.64
CCDC78-204ENST00000439619 SMIM13P0DJ93 91 aa11.03□□□□□ -0.64
CCDC78-204ENST00000439619 S100A12P80511 92 aa11.03□□□□□ -0.64
CCDC78-204ENST00000439619 BOD1L2Q8IYS8 172 aa11.03□□□□□ -0.64
CCDC78-204ENST00000439619 LINC00304Q8N9R0 145 aa11.03□□□□□ -0.64
CCDC78-204ENST00000439619 HIGD2AQ9BW72 106 aa11.03□□□□□ -0.64
CCDC78-204ENST00000439619 MYMXA0A1B0GTQ4 84 aa11.02□□□□□ -0.65
CCDC78-204ENST00000439619 LEPROTL1O95214 131 aa11.02□□□□□ -0.65
CCDC78-204ENST00000439619 KRTAP13-2Q52LG2 175 aa11.02□□□□□ -0.65
CCDC78-204ENST00000439619 Q8NDZ9 215 aa11.02□□□□□ -0.65
CCDC78-204ENST00000439619 NDUFA12Q9UI09 145 aa11.02□□□□□ -0.65
CCDC78-204ENST00000439619 TRGC2P03986 189 aa11.01□□□□□ -0.65
CCDC78-204ENST00000439619 ZNF706Q9Y5V0 76 aaPredicted RBP11.01□□□□□ -0.65
CCDC78-204ENST00000439619 PLNP26678 52 aa11□□□□□ -0.65
CCDC78-204ENST00000439619 MIR7-3HGQ8N6C7 128 aa11□□□□□ -0.65
CCDC78-204ENST00000439619 PLEKHB2Q96CS7 222 aa11□□□□□ -0.65
CCDC78-204ENST00000439619 PRYO14603 147 aa10.99□□□□□ -0.65
CCDC78-204ENST00000439619 CTAG1AP78358 180 aa10.99□□□□□ -0.65
CCDC78-204ENST00000439619 HSPB8Q9UJY1 196 aa10.99□□□□□ -0.65
CCDC78-204ENST00000439619 LPAP08519 4548 aa10.98□□□□□ -0.65
CCDC78-204ENST00000439619 HERVK_113P61574 105 aa10.98□□□□□ -0.65
CCDC78-204ENST00000439619 SERF1AO75920 110 aa10.97□□□□□ -0.65
CCDC78-204ENST00000439619 NCR3O14931 201 aa10.96□□□□□ -0.65
CCDC78-204ENST00000439619 LEPROTO15243 131 aa10.96□□□□□ -0.65
CCDC78-204ENST00000439619 ETDCA0A1B0GVM5 59 aa10.95□□□□□ -0.66
CCDC78-204ENST00000439619 LINC00337Q8N6G1 96 aa10.95□□□□□ -0.66
CCDC78-204ENST00000439619 DPM2O94777 84 aa10.94□□□□□ -0.66
CCDC78-204ENST00000439619 MIEN1Q9BRT3 115 aa10.94□□□□□ -0.66
CCDC78-204ENST00000439619 KCNQ1DNQ9H478 68 aa10.94□□□□□ -0.66
CCDC78-204ENST00000439619 FABP4P15090 132 aa10.93□□□□□ -0.66
CCDC78-204ENST00000439619 SPAG11AQ6PDA7 123 aa10.93□□□□□ -0.66
CCDC78-204ENST00000439619 SPRR4Q96PI1 79 aa10.93□□□□□ -0.66
CCDC78-204ENST00000439619 LGALS3P17931 250 aaKnown RBP10.92□□□□□ -0.66
CCDC78-204ENST00000439619 NMUP48645 174 aa10.92□□□□□ -0.66
CCDC78-204ENST00000439619 C4orf48Q5BLP8 95 aa10.92□□□□□ -0.66
CCDC78-204ENST00000439619 J3QQQ9 107 aa10.91□□□□□ -0.66
CCDC78-204ENST00000439619 RETNLBQ9BQ08 111 aa10.91□□□□□ -0.66
CCDC78-204ENST00000439619 TRBV10-3A0A0K0K1G6 114 aa10.9□□□□□ -0.66
CCDC78-204ENST00000439619 A0A0U1RQV1 116 aa10.9□□□□□ -0.66
CCDC78-204ENST00000439619 IGKCP01834 107 aa10.9□□□□□ -0.66
CCDC78-204ENST00000439619 SPRR1AP35321 89 aa10.9□□□□□ -0.66
CCDC78-204ENST00000439619 C3orf22Q8N5N4 141 aa10.89□□□□□ -0.67
CCDC78-204ENST00000439619 LOC107984156A0A0G2JMH3 177 aa10.88□□□□□ -0.67
CCDC78-204ENST00000439619 TRBV10-2A0A0K0K1G8 114 aa10.88□□□□□ -0.67
CCDC78-204ENST00000439619 LINC00310P59036 64 aa10.88□□□□□ -0.67
CCDC78-204ENST00000439619 TSPEAR-AS2P59090 65 aa10.88□□□□□ -0.67
CCDC78-204ENST00000439619 ARL17AQ8IVW1 177 aa10.88□□□□□ -0.67
CCDC78-204ENST00000439619 SMCR5Q8TEV8 140 aa10.88□□□□□ -0.67
CCDC78-204ENST00000439619 DDTP30046 118 aa10.87□□□□□ -0.67
CCDC78-204ENST00000439619 DAND5Q8N907 189 aa10.87□□□□□ -0.67
CCDC78-204ENST00000439619 IGLV7-46A0A075B6I9 117 aa10.86□□□□□ -0.67
CCDC78-204ENST00000439619 SLC7A5P1Q8MH63 180 aa10.86□□□□□ -0.67
CCDC78-204ENST00000439619 PMCHL2Q9BQD1 86 aa10.86□□□□□ -0.67
CCDC78-204ENST00000439619 CDIP1Q9H305 208 aa10.86□□□□□ -0.67
CCDC78-204ENST00000439619 SPANXB1Q9NS25 103 aaPredicted RBP10.86□□□□□ -0.67
CCDC78-204ENST00000439619 COLCA2A8K830 154 aa10.85□□□□□ -0.67
CCDC78-204ENST00000439619 S100A7L2Q5SY68 101 aa10.85□□□□□ -0.67
CCDC78-204ENST00000439619 KRTAP4-16G5E9R7 235 aaPredicted RBP10.84□□□□□ -0.67
CCDC78-204ENST00000439619 TPRXLQ17RH7 258 aa10.84□□□□□ -0.67
CCDC78-204ENST00000439619 NDUFC2O95298 119 aa10.83□□□□□ -0.68
CCDC78-204ENST00000439619 PPDPFQ9H3Y8 114 aa10.83□□□□□ -0.68
CCDC78-204ENST00000439619 B5MCH6 92 aa10.82□□□□□ -0.68
CCDC78-204ENST00000439619 JOSD1Q15040 202 aaPredicted RBP10.81□□□□□ -0.68
CCDC78-204ENST00000439619 GAGE2AQ6NT46 116 aa10.81□□□□□ -0.68
CCDC78-204ENST00000439619 Q8NBF4 154 aa10.81□□□□□ -0.68
CCDC78-204ENST00000439619 CBY1Q9Y3M2 126 aa10.81□□□□□ -0.68
CCDC78-204ENST00000439619 E9PLD3 99 aa10.8□□□□□ -0.68
CCDC78-204ENST00000439619 LINC00483Q53H64 154 aa10.79□□□□□ -0.68
CCDC78-204ENST00000439619 Q6ZRX8 168 aa10.79□□□□□ -0.68
CCDC78-204ENST00000439619 FP248Q71RG6 208 aaPredicted RBP10.79□□□□□ -0.68
CCDC78-204ENST00000439619 SPINK1P00995 79 aa10.78□□□□□ -0.68
CCDC78-204ENST00000439619 TRAV23DV6A0A075B6W5 121 aa10.77□□□□□ -0.69
CCDC78-204ENST00000439619 A0A0J9YXY3 114 aa10.77□□□□□ -0.69
CCDC78-204ENST00000439619 SYS1-DBNDD2H3BUS1 97 aa10.77□□□□□ -0.69
CCDC78-204ENST00000439619 IGLV6-57P01721 117 aa10.77□□□□□ -0.69
CCDC78-204ENST00000439619 HINT1P49773 126 aaPredicted RBP10.77□□□□□ -0.69
CCDC78-204ENST00000439619 NPC2P61916 151 aa10.76□□□□□ -0.69
CCDC78-204ENST00000439619 IGLV9-49A0A0B4J1Y8 123 aa10.75□□□□□ -0.69
CCDC78-204ENST00000439619 SSBP3-AS1Q7Z2R9 100 aa10.74□□□□□ -0.69
CCDC78-204ENST00000439619 ZNF73O43830 326 aaPredicted RBP10.73□□□□□ -0.69
CCDC78-204ENST00000439619 HIST1H2BKO60814 126 aa10.73□□□□□ -0.69
CCDC78-204ENST00000439619 ERC2-IT1O76042 136 aa10.73□□□□□ -0.69
CCDC78-204ENST00000439619 HIST1H2BJP06899 126 aa10.73□□□□□ -0.69
CCDC78-204ENST00000439619 HIST1H2BOP23527 126 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms