RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 Q8N9L7 120 aa6.23□□□□□ -1.41
COPB1-202ENST00000439561 MRAPQ8TCY5 172 aa6.23□□□□□ -1.41
COPB1-202ENST00000439561 OBSCN-AS1Q96MR7 158 aa6.23□□□□□ -1.41
COPB1-202ENST00000439561 NIPBLQ6KC79 2804 aaeCLIP6.23□□□□□ -1.413e-6■■■■□ 24.3
COPB1-202ENST00000439561 TRBV10-3A0A0K0K1G6 114 aa6.23□□□□□ -1.41
COPB1-202ENST00000439561 A0A096LNT2 108 aa6.22□□□□□ -1.41
COPB1-202ENST00000439561 LY6G6DO95868 133 aa6.22□□□□□ -1.41
COPB1-202ENST00000439561 PRB2P02812 416 aaPredicted RBP6.22□□□□□ -1.41
COPB1-202ENST00000439561 SETXQ7Z333 2677 aaKnown RBP6.22□□□□□ -1.41
COPB1-202ENST00000439561 IGSF10Q6WRI0 2623 aa6.22□□□□□ -1.41
COPB1-202ENST00000439561 NANOS2P60321 138 aaKnown RBP6.22□□□□□ -1.41
COPB1-202ENST00000439561 BRK1Q8WUW1 75 aa6.22□□□□□ -1.41
COPB1-202ENST00000439561 F8P00451 2351 aa6.22□□□□□ -1.41
COPB1-202ENST00000439561 A0A0U1RQV1 116 aa6.21□□□□□ -1.41
COPB1-202ENST00000439561 C3orf84H3BNL1 204 aa6.21□□□□□ -1.41
COPB1-202ENST00000439561 COX7BP24311 80 aa6.21□□□□□ -1.41
COPB1-202ENST00000439561 Q6ZQT0 140 aa6.21□□□□□ -1.41
COPB1-202ENST00000439561 CAMK2N2Q96S95 79 aa6.21□□□□□ -1.42
COPB1-202ENST00000439561 IGLV1-51P01701 117 aa6.21□□□□□ -1.42
COPB1-202ENST00000439561 COX17Q14061 63 aa6.2□□□□□ -1.42
COPB1-202ENST00000439561 NREPQ16612 68 aa6.2□□□□□ -1.42
COPB1-202ENST00000439561 ITPR3Q14573 2671 aa6.2□□□□□ -1.42
COPB1-202ENST00000439561 A0A1B0GUV1 79 aa6.2□□□□□ -1.42
COPB1-202ENST00000439561 SERP1Q9Y6X1 66 aa6.2□□□□□ -1.42
COPB1-202ENST00000439561 FSHBP01225 129 aa6.2□□□□□ -1.42
COPB1-202ENST00000439561 MUC7Q8TAX7 377 aa6.2□□□□□ -1.42
COPB1-202ENST00000439561 TM2D3Q9BRN9 247 aa6.2□□□□□ -1.42
COPB1-202ENST00000439561 NDUFC2-KCTD14E9PQ53 114 aa6.19□□□□□ -1.42
COPB1-202ENST00000439561 SPATA3Q8NHX4 192 aa6.19□□□□□ -1.42
COPB1-202ENST00000439561 CR1P17927 2039 aa6.18□□□□□ -1.42
COPB1-202ENST00000439561 ZNF73O43830 326 aaPredicted RBP6.18□□□□□ -1.42
COPB1-202ENST00000439561 Q8NDZ9 215 aa6.18□□□□□ -1.42
COPB1-202ENST00000439561 CSNK1G2-AS1Q8NCQ2 148 aa6.18□□□□□ -1.42
COPB1-202ENST00000439561 MIFP14174 115 aa6.18□□□□□ -1.42
COPB1-202ENST00000439561 PDE6GP18545 87 aa6.18□□□□□ -1.42
COPB1-202ENST00000439561 KIAA0087Q14695 138 aa6.17□□□□□ -1.42
COPB1-202ENST00000439561 APCP25054 2843 aa6.17□□□□□ -1.42
COPB1-202ENST00000439561 H7BZZ5 65 aa6.17□□□□□ -1.42
COPB1-202ENST00000439561 BPY2O14599 106 aa6.17□□□□□ -1.42
COPB1-202ENST00000439561 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.17□□□□□ -1.42
COPB1-202ENST00000439561 CELA1Q9UNI1 258 aa6.17□□□□□ -1.42
COPB1-202ENST00000439561 Q5XG85 94 aa6.16□□□□□ -1.42
COPB1-202ENST00000439561 LRCOL1A6NCL2 159 aa6.16□□□□□ -1.42
COPB1-202ENST00000439561 LINC00474Q9P2X8 69 aa6.16□□□□□ -1.42
COPB1-202ENST00000439561 SMIM26A0A096LP01 95 aa6.15□□□□□ -1.42
COPB1-202ENST00000439561 LINC00336Q6ZUF6 198 aa6.15□□□□□ -1.42
COPB1-202ENST00000439561 NKAPP1Q8N9T2 125 aa6.15□□□□□ -1.42
COPB1-202ENST00000439561 C19orf73Q9NVV2 129 aa6.15□□□□□ -1.42
COPB1-202ENST00000439561 TRBV7-6A0A0J9YX20 115 aa6.15□□□□□ -1.43
COPB1-202ENST00000439561 TMEM254Q8TBM7 123 aa6.14□□□□□ -1.43
COPB1-202ENST00000439561 LINC00167Q96N53 147 aa6.14□□□□□ -1.43
COPB1-202ENST00000439561 IGKV2D-24A0A075B6R9 120 aa6.14□□□□□ -1.43
COPB1-202ENST00000439561 UNC79Q9P2D8 2635 aa6.14□□□□□ -1.43
COPB1-202ENST00000439561 SPART-AS1P0CW21 52 aa6.14□□□□□ -1.43
COPB1-202ENST00000439561 LOC110117498A0A087WWA1 95 aa6.13□□□□□ -1.43
COPB1-202ENST00000439561 LYRM9A8MSI8 78 aa6.13□□□□□ -1.43
COPB1-202ENST00000439561 FUSP35637 526 aaKnown RBP eCLIP6.13□□□□□ -1.431e-5■■■□□ 16.6
COPB1-202ENST00000439561 PRR4Q16378 134 aa6.13□□□□□ -1.43
COPB1-202ENST00000439561 APOC4P55056 127 aa6.13□□□□□ -1.43
COPB1-202ENST00000439561 FAM30AQ9NZY2 134 aa6.13□□□□□ -1.43
COPB1-202ENST00000439561 X6R8D5 127 aa6.13□□□□□ -1.43
COPB1-202ENST00000439561 C6orf48Q9UBA6 75 aa6.12□□□□□ -1.43
COPB1-202ENST00000439561 CXCL6P80162 114 aa6.12□□□□□ -1.43
COPB1-202ENST00000439561 NDUFC1O43677 76 aa6.11□□□□□ -1.43
COPB1-202ENST00000439561 LELP1Q5T871 98 aa6.11□□□□□ -1.43
COPB1-202ENST00000439561 FASNP49327 2511 aaKnown RBP6.1□□□□□ -1.43
COPB1-202ENST00000439561 IGLV6-57P01721 117 aa6.1□□□□□ -1.43
COPB1-202ENST00000439561 KLKP1Q107X0 134 aa6.1□□□□□ -1.43
COPB1-202ENST00000439561 SMR3AQ99954 134 aa6.1□□□□□ -1.43
COPB1-202ENST00000439561 HIGD2AQ9BW72 106 aa6.1□□□□□ -1.43
COPB1-202ENST00000439561 PRO0628Q9UI54 55 aa6.1□□□□□ -1.43
COPB1-202ENST00000439561 H3BQ85 93 aa6.1□□□□□ -1.43
COPB1-202ENST00000439561 ATRQ13535 2644 aa6.1□□□□□ -1.43
COPB1-202ENST00000439561 LYPD5Q6UWN5 251 aa6.09□□□□□ -1.43
COPB1-202ENST00000439561 RPL37AP8A6NKH3 93 aa6.09□□□□□ -1.43
COPB1-202ENST00000439561 PRYO14603 147 aa6.09□□□□□ -1.43
COPB1-202ENST00000439561 M0R378 163 aa6.09□□□□□ -1.44
COPB1-202ENST00000439561 Q6ZRU5 148 aa6.09□□□□□ -1.44
COPB1-202ENST00000439561 WFDC10BQ8IUB3 73 aa6.08□□□□□ -1.44
COPB1-202ENST00000439561 C9orf66Q5T8R8 295 aa6.07□□□□□ -1.44
COPB1-202ENST00000439561 ETDCA0A1B0GVM5 59 aa6.07□□□□□ -1.44
COPB1-202ENST00000439561 A0A0J9YWU9 116 aa6.07□□□□□ -1.44
COPB1-202ENST00000439561 IGHV4-30-4P0DP06 118 aa6.07□□□□□ -1.44
COPB1-202ENST00000439561 UBE2BP63146 152 aa6.07□□□□□ -1.44
COPB1-202ENST00000439561 ELOF1P60002 83 aaKnown RBP6.06□□□□□ -1.44
COPB1-202ENST00000439561 USP24Q9UPU5 2620 aa6.06□□□□□ -1.44
COPB1-202ENST00000439561 BCE1O60756 84 aa6.06□□□□□ -1.44
COPB1-202ENST00000439561 TRBV7-4A0A0J9YYF1 115 aa6.05□□□□□ -1.44
COPB1-202ENST00000439561 WIPF1O43516 503 aa6.05□□□□□ -1.44
COPB1-202ENST00000439561 FP248Q71RG6 208 aaPredicted RBP6.05□□□□□ -1.44
COPB1-202ENST00000439561 SMIM29Q86T20 159 aa6.05□□□□□ -1.44
COPB1-202ENST00000439561 ATP5EP56381 51 aaPredicted RBP6.05□□□□□ -1.44
COPB1-202ENST00000439561 UBR5O95071 2799 aaPredicted RBP6.04□□□□□ -1.44
COPB1-202ENST00000439561 KPRPQ5T749 579 aaPredicted RBP6.04□□□□□ -1.44
COPB1-202ENST00000439561 RETNQ9HD89 108 aa6.04□□□□□ -1.44
COPB1-202ENST00000439561 HECTD1Q9ULT8 2610 aa6.04□□□□□ -1.44
COPB1-202ENST00000439561 EGFEM1PQ0D2K5 195 aa6.04□□□□□ -1.44
COPB1-202ENST00000439561 SYCNQ0VAF6 134 aa6.04□□□□□ -1.44
COPB1-202ENST00000439561 VPREB1P12018 145 aa6.03□□□□□ -1.44
COPB1-202ENST00000439561 DEFB116Q30KQ4 102 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms