RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 BCE1O60756 84 aa6.36□□□□□ -1.39
MCF2L-216ENST00000439475 IGKCP01834 107 aa6.36□□□□□ -1.39
MCF2L-216ENST00000439475 NDUFA12Q9UI09 145 aa6.36□□□□□ -1.39
MCF2L-216ENST00000439475 A0A0U1RRA0 63 aa6.35□□□□□ -1.39
MCF2L-216ENST00000439475 LEPROTO15243 131 aa6.35□□□□□ -1.39
MCF2L-216ENST00000439475 HIST1H2BKO60814 126 aa6.35□□□□□ -1.39
MCF2L-216ENST00000439475 HIST1H2BJP06899 126 aa6.35□□□□□ -1.39
MCF2L-216ENST00000439475 HIST1H2BOP23527 126 aa6.35□□□□□ -1.39
MCF2L-216ENST00000439475 HIST1H2BBP33778 126 aa6.35□□□□□ -1.39
MCF2L-216ENST00000439475 HIST1H2BDP58876 126 aa6.35□□□□□ -1.39
MCF2L-216ENST00000439475 HIST1H2BCP62807 126 aa6.35□□□□□ -1.39
MCF2L-216ENST00000439475 HIST2H2BEQ16778 126 aa6.35□□□□□ -1.39
MCF2L-216ENST00000439475 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.35□□□□□ -1.39
MCF2L-216ENST00000439475 HIST1H2BHQ93079 126 aa6.35□□□□□ -1.39
MCF2L-216ENST00000439475 HIST1H2BNQ99877 126 aa6.35□□□□□ -1.39
MCF2L-216ENST00000439475 HIST1H2BMQ99879 126 aa6.35□□□□□ -1.39
MCF2L-216ENST00000439475 IGLV1-50A0A075B6I6 118 aa6.34□□□□□ -1.39
MCF2L-216ENST00000439475 SMIM13P0DJ93 91 aa6.34□□□□□ -1.39
MCF2L-216ENST00000439475 VPREB1P12018 145 aa6.34□□□□□ -1.39
MCF2L-216ENST00000439475 LGALS3P17931 250 aaKnown RBP6.34□□□□□ -1.39
MCF2L-216ENST00000439475 UBE2AP49459 152 aa6.34□□□□□ -1.39
MCF2L-216ENST00000439475 NMUP48645 174 aa6.33□□□□□ -1.4
MCF2L-216ENST00000439475 IGKV2-28A0A075B6P5 120 aa6.32□□□□□ -1.4
MCF2L-216ENST00000439475 J3QQQ9 107 aa6.32□□□□□ -1.4
MCF2L-216ENST00000439475 M0R378 163 aa6.32□□□□□ -1.4
MCF2L-216ENST00000439475 IGKV2D-28P01615 120 aa6.32□□□□□ -1.4
MCF2L-216ENST00000439475 RPL13AP40429 203 aaKnown RBP6.32□□□□□ -1.4
MCF2L-216ENST00000439475 S100A12P80511 92 aa6.32□□□□□ -1.4
MCF2L-216ENST00000439475 MIR7-3HGQ8N6C7 128 aa6.32□□□□□ -1.4
MCF2L-216ENST00000439475 PMCHL2Q9BQD1 86 aa6.32□□□□□ -1.4
MCF2L-216ENST00000439475 HERC1Q15751 4861 aa6.32□□□□□ -1.4
MCF2L-216ENST00000439475 SYS1-DBNDD2H3BUS1 97 aa6.31□□□□□ -1.4
MCF2L-216ENST00000439475 PET117Q6UWS5 81 aa6.31□□□□□ -1.4
MCF2L-216ENST00000439475 BOD1L2Q8IYS8 172 aa6.31□□□□□ -1.4
MCF2L-216ENST00000439475 PRR26Q8N8Z3 221 aa6.31□□□□□ -1.4
MCF2L-216ENST00000439475 S100A1P23297 94 aa6.3□□□□□ -1.4
MCF2L-216ENST00000439475 FAM19A1Q7Z5A9 133 aa6.3□□□□□ -1.4
MCF2L-216ENST00000439475 MIEN1Q9BRT3 115 aa6.3□□□□□ -1.4
MCF2L-216ENST00000439475 IGKV2D-26A0A0A0MRZ7 120 aa6.29□□□□□ -1.4
MCF2L-216ENST00000439475 E9PLD3 99 aa6.29□□□□□ -1.4
MCF2L-216ENST00000439475 COA6Q5JTJ3 125 aaKnown RBP6.29□□□□□ -1.4
MCF2L-216ENST00000439475 TMEM126AQ9H061 195 aa6.29□□□□□ -1.4
MCF2L-216ENST00000439475 KRTAP1-4P0C5Y4 121 aa6.28□□□□□ -1.4
MCF2L-216ENST00000439475 C20orf202A1L168 122 aa6.27□□□□□ -1.41
MCF2L-216ENST00000439475 CRYGAP11844 174 aa6.27□□□□□ -1.41
MCF2L-216ENST00000439475 AKR1D1P51857 326 aa6.27□□□□□ -1.41
MCF2L-216ENST00000439475 TSPEAR-AS2P59090 65 aa6.27□□□□□ -1.41
MCF2L-216ENST00000439475 LINC01545Q5VT33 79 aa6.27□□□□□ -1.41
MCF2L-216ENST00000439475 LOC107984156A0A0G2JMH3 177 aa6.26□□□□□ -1.41
MCF2L-216ENST00000439475 TMEM238C9JI98 176 aa6.26□□□□□ -1.41
MCF2L-216ENST00000439475 PRYO14603 147 aa6.26□□□□□ -1.41
MCF2L-216ENST00000439475 KRTDAPP60985 99 aa6.26□□□□□ -1.41
MCF2L-216ENST00000439475 ARL17AQ8IVW1 177 aa6.26□□□□□ -1.41
MCF2L-216ENST00000439475 Q8NDZ9 215 aa6.26□□□□□ -1.41
MCF2L-216ENST00000439475 TNXBP22105 4242 aa6.26□□□□□ -1.41
MCF2L-216ENST00000439475 NCR3O14931 201 aa6.25□□□□□ -1.41
MCF2L-216ENST00000439475 C3orf79P0CE67 100 aa6.25□□□□□ -1.41
MCF2L-216ENST00000439475 PRLHP81277 87 aa6.25□□□□□ -1.41
MCF2L-216ENST00000439475 KRTAP13-1Q8IUC0 172 aa6.25□□□□□ -1.41
MCF2L-216ENST00000439475 A0A0J9YXY3 114 aa6.24□□□□□ -1.41
MCF2L-216ENST00000439475 TRBV10-2A0A0K0K1G8 114 aa6.24□□□□□ -1.41
MCF2L-216ENST00000439475 NDUFC2O95298 119 aa6.24□□□□□ -1.41
MCF2L-216ENST00000439475 DAND5Q8N907 189 aa6.24□□□□□ -1.41
MCF2L-216ENST00000439475 TYMSOSQ8TAI1 123 aa6.24□□□□□ -1.41
MCF2L-216ENST00000439475 ETDCA0A1B0GVM5 59 aa6.23□□□□□ -1.41
MCF2L-216ENST00000439475 FAM229BQ4G0N7 80 aa6.23□□□□□ -1.41
MCF2L-216ENST00000439475 S100A7L2Q5SY68 101 aa6.23□□□□□ -1.41
MCF2L-216ENST00000439475 LINC00337Q8N6G1 96 aa6.23□□□□□ -1.41
MCF2L-216ENST00000439475 HIGD2AQ9BW72 106 aa6.23□□□□□ -1.41
MCF2L-216ENST00000439475 KCNQ1DNQ9H478 68 aa6.23□□□□□ -1.41
MCF2L-216ENST00000439475 SPANXB1Q9NS25 103 aaPredicted RBP6.23□□□□□ -1.41
MCF2L-216ENST00000439475 CBY1Q9Y3M2 126 aa6.23□□□□□ -1.41
MCF2L-216ENST00000439475 TRBV10-3A0A0K0K1G6 114 aa6.22□□□□□ -1.41
MCF2L-216ENST00000439475 ZNF815PA8K554 130 aa6.22□□□□□ -1.41
MCF2L-216ENST00000439475 S100A2P29034 98 aa6.22□□□□□ -1.41
MCF2L-216ENST00000439475 DDTP30046 118 aa6.22□□□□□ -1.41
MCF2L-216ENST00000439475 ZNF706Q9Y5V0 76 aaPredicted RBP6.22□□□□□ -1.41
MCF2L-216ENST00000439475 TIMM17BO60830 172 aa6.21□□□□□ -1.42
MCF2L-216ENST00000439475 S100A6P06703 90 aa6.21□□□□□ -1.42
MCF2L-216ENST00000439475 SPRR1AP35321 89 aa6.21□□□□□ -1.42
MCF2L-216ENST00000439475 HINT1P49773 126 aaPredicted RBP6.2□□□□□ -1.42
MCF2L-216ENST00000439475 NPC2P61916 151 aa6.2□□□□□ -1.42
MCF2L-216ENST00000439475 A0A087X002 238 aa6.19□□□□□ -1.42
MCF2L-216ENST00000439475 SNRPEP62304 92 aaKnown RBP6.19□□□□□ -1.42
MCF2L-216ENST00000439475 ADAMTSL4-AS1Q5T5F5 129 aa6.19□□□□□ -1.42
MCF2L-216ENST00000439475 SCGB1D4Q6XE38 83 aa6.19□□□□□ -1.42
MCF2L-216ENST00000439475 SMCR5Q8TEV8 140 aa6.19□□□□□ -1.42
MCF2L-216ENST00000439475 COPS9Q8WXC6 57 aa6.19□□□□□ -1.42
MCF2L-216ENST00000439475 ANAPC11Q9NYG5 84 aa6.19□□□□□ -1.42
MCF2L-216ENST00000439475 JOSD1Q15040 202 aaPredicted RBP6.18□□□□□ -1.42
MCF2L-216ENST00000439475 LINC00308Q8TCZ7 52 aa6.18□□□□□ -1.42
MCF2L-216ENST00000439475 SPANXCQ9NY87 97 aa6.18□□□□□ -1.42
MCF2L-216ENST00000439475 SOSTDC1Q6X4U4 206 aa6.17□□□□□ -1.42
MCF2L-216ENST00000439475 LINC00518Q8N0U6 118 aa6.17□□□□□ -1.42
MCF2L-216ENST00000439475 OR13C6PQ8NH95 151 aa6.17□□□□□ -1.42
MCF2L-216ENST00000439475 SPRR4Q96PI1 79 aa6.17□□□□□ -1.42
MCF2L-216ENST00000439475 TRAV23DV6A0A075B6W5 121 aa6.16□□□□□ -1.42
MCF2L-216ENST00000439475 B5MCH6 92 aa6.16□□□□□ -1.42
MCF2L-216ENST00000439475 HSBP1L1C9JCN9 74 aa6.16□□□□□ -1.42
MCF2L-216ENST00000439475 KRTAP4-16G5E9R7 235 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms