RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 TMEM126AQ9H061 195 aa10.52□□□□□ -0.73
GTF3A-204ENST00000438571 SND1-IT1Q9HBX3 110 aa10.52□□□□□ -0.73
GTF3A-204ENST00000438571 NDUFA6P56556 154 aa10.51□□□□□ -0.73
GTF3A-204ENST00000438571 FABP9Q0Z7S8 132 aa10.51□□□□□ -0.73
GTF3A-204ENST00000438571 FAM19A1Q7Z5A9 133 aa10.51□□□□□ -0.73
GTF3A-204ENST00000438571 ERG28Q9UKR5 140 aa10.51□□□□□ -0.73
GTF3A-204ENST00000438571 M0R378 163 aa10.5□□□□□ -0.73
GTF3A-204ENST00000438571 PMCHL1Q16048 86 aa10.49□□□□□ -0.73
GTF3A-204ENST00000438571 C3orf22Q8N5N4 141 aa10.49□□□□□ -0.73
GTF3A-204ENST00000438571 A0A0U1RQV1 116 aa10.48□□□□□ -0.73
GTF3A-204ENST00000438571 COX19Q49B96 90 aa10.48□□□□□ -0.73
GTF3A-204ENST00000438571 TRAPPC1Q9Y5R8 145 aa10.48□□□□□ -0.73
GTF3A-204ENST00000438571 C11orf86A6NJI1 115 aa10.47□□□□□ -0.73
GTF3A-204ENST00000438571 KRTAP9-2Q9BYQ4 174 aa10.47□□□□□ -0.73
GTF3A-204ENST00000438571 IGKV2D-26A0A0A0MRZ7 120 aa10.46□□□□□ -0.73
GTF3A-204ENST00000438571 C18orf32Q8TCD1 76 aa10.46□□□□□ -0.73
GTF3A-204ENST00000438571 PLEKHB2Q96CS7 222 aa10.45□□□□□ -0.74
GTF3A-204ENST00000438571 TRGC2P03986 189 aa10.44□□□□□ -0.74
GTF3A-204ENST00000438571 HBDP02042 147 aa10.43□□□□□ -0.74
GTF3A-204ENST00000438571 TPRXLQ17RH7 258 aa10.43□□□□□ -0.74
GTF3A-204ENST00000438571 IGLV7-46A0A075B6I9 117 aa10.42□□□□□ -0.74
GTF3A-204ENST00000438571 LINC00614P0C842 121 aa10.42□□□□□ -0.74
GTF3A-204ENST00000438571 RPL24P83731 157 aaKnown RBP10.42□□□□□ -0.74
GTF3A-204ENST00000438571 TMEM170BQ5T4T1 132 aa10.42□□□□□ -0.74
GTF3A-204ENST00000438571 HIGD2AQ9BW72 106 aa10.42□□□□□ -0.74
GTF3A-204ENST00000438571 CDIP1Q9H305 208 aa10.42□□□□□ -0.74
GTF3A-204ENST00000438571 A0A0U1RRA0 63 aa10.41□□□□□ -0.74
GTF3A-204ENST00000438571 COX17Q14061 63 aa10.41□□□□□ -0.74
GTF3A-204ENST00000438571 BAGE3Q86Y29 109 aa10.41□□□□□ -0.74
GTF3A-204ENST00000438571 SPRR4Q96PI1 79 aa10.38□□□□□ -0.75
GTF3A-204ENST00000438571 LINC00158P58513 81 aa10.37□□□□□ -0.75
GTF3A-204ENST00000438571 PPDPFQ9H3Y8 114 aa10.36□□□□□ -0.75
GTF3A-204ENST00000438571 CHTOPQ9Y3Y2 248 aaKnown RBP10.36□□□□□ -0.75
GTF3A-204ENST00000438571 TMEM223A0PJW6 202 aa10.35□□□□□ -0.75
GTF3A-204ENST00000438571 NCR3O14931 201 aa10.34□□□□□ -0.75
GTF3A-204ENST00000438571 LCE2CQ5TA81 110 aa10.34□□□□□ -0.75
GTF3A-204ENST00000438571 SMIM13P0DJ93 91 aa10.33□□□□□ -0.76
GTF3A-204ENST00000438571 SFTA2Q6UW10 78 aa10.33□□□□□ -0.76
GTF3A-204ENST00000438571 DAND5Q8N907 189 aa10.33□□□□□ -0.76
GTF3A-204ENST00000438571 HIST1H2BKO60814 126 aa10.32□□□□□ -0.76
GTF3A-204ENST00000438571 HIST1H2BJP06899 126 aa10.32□□□□□ -0.76
GTF3A-204ENST00000438571 HIST1H2BOP23527 126 aa10.32□□□□□ -0.76
GTF3A-204ENST00000438571 HIST1H2BBP33778 126 aa10.32□□□□□ -0.76
GTF3A-204ENST00000438571 HIST1H2BDP58876 126 aa10.32□□□□□ -0.76
GTF3A-204ENST00000438571 HIST1H2BCP62807 126 aa10.32□□□□□ -0.76
GTF3A-204ENST00000438571 HIST2H2BEQ16778 126 aa10.32□□□□□ -0.76
GTF3A-204ENST00000438571 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.32□□□□□ -0.76
GTF3A-204ENST00000438571 HIST1H2BHQ93079 126 aa10.32□□□□□ -0.76
GTF3A-204ENST00000438571 HIST1H2BNQ99877 126 aa10.32□□□□□ -0.76
GTF3A-204ENST00000438571 HIST1H2BMQ99879 126 aa10.32□□□□□ -0.76
GTF3A-204ENST00000438571 CTAG1AP78358 180 aa10.31□□□□□ -0.76
GTF3A-204ENST00000438571 PRYO14603 147 aa10.3□□□□□ -0.76
GTF3A-204ENST00000438571 SPRR1AP35321 89 aa10.3□□□□□ -0.76
GTF3A-204ENST00000438571 BOD1L2Q8IYS8 172 aa10.3□□□□□ -0.76
GTF3A-204ENST00000438571 Q8NBF4 154 aa10.3□□□□□ -0.76
GTF3A-204ENST00000438571 MEIG1Q5JSS6 88 aa10.29□□□□□ -0.76
GTF3A-204ENST00000438571 MIR7-3HGQ8N6C7 128 aa10.29□□□□□ -0.76
GTF3A-204ENST00000438571 KRTAP4-16G5E9R7 235 aaPredicted RBP10.28□□□□□ -0.76
GTF3A-204ENST00000438571 LINC00310P59036 64 aa10.28□□□□□ -0.76
GTF3A-204ENST00000438571 SPAG11AQ6PDA7 123 aa10.28□□□□□ -0.76
GTF3A-204ENST00000438571 SMCR5Q8TEV8 140 aa10.28□□□□□ -0.76
GTF3A-204ENST00000438571 IFI27L1Q96BM0 104 aa10.28□□□□□ -0.76
GTF3A-204ENST00000438571 TRAV12-1A0A0B4J245 112 aa10.27□□□□□ -0.77
GTF3A-204ENST00000438571 KRTAP13-3Q3SY46 172 aa10.26□□□□□ -0.77
GTF3A-204ENST00000438571 LINC00337Q8N6G1 96 aa10.26□□□□□ -0.77
GTF3A-204ENST00000438571 KCNQ1DNQ9H478 68 aa10.26□□□□□ -0.77
GTF3A-204ENST00000438571 ZNF706Q9Y5V0 76 aaPredicted RBP10.26□□□□□ -0.77
GTF3A-204ENST00000438571 TRBV10-3A0A0K0K1G6 114 aa10.25□□□□□ -0.77
GTF3A-204ENST00000438571 SERF1AO75920 110 aa10.25□□□□□ -0.77
GTF3A-204ENST00000438571 TSPEAR-AS2P59090 65 aa10.24□□□□□ -0.77
GTF3A-204ENST00000438571 FP248Q71RG6 208 aaPredicted RBP10.24□□□□□ -0.77
GTF3A-204ENST00000438571 KRTAP4-1Q9BYQ7 146 aa10.24□□□□□ -0.77
GTF3A-204ENST00000438571 ETDCA0A1B0GVM5 59 aa10.23□□□□□ -0.77
GTF3A-204ENST00000438571 C4orf48Q5BLP8 95 aa10.23□□□□□ -0.77
GTF3A-204ENST00000438571 ERC2-IT1O76042 136 aa10.22□□□□□ -0.77
GTF3A-204ENST00000438571 FAM19A2Q8N3H0 131 aa10.22□□□□□ -0.77
GTF3A-204ENST00000438571 CHCHD1Q96BP2 118 aaKnown RBP10.22□□□□□ -0.77
GTF3A-204ENST00000438571 NDUFA12Q9UI09 145 aa10.22□□□□□ -0.77
GTF3A-204ENST00000438571 LINC00483Q53H64 154 aa10.21□□□□□ -0.77
GTF3A-204ENST00000438571 H0Y8G0 127 aa10.2□□□□□ -0.78
GTF3A-204ENST00000438571 HERV-K104P63124 156 aa10.2□□□□□ -0.78
GTF3A-204ENST00000438571 MOBPQ13875 183 aa10.2□□□□□ -0.78
GTF3A-204ENST00000438571 GAGE2AQ6NT46 116 aa10.2□□□□□ -0.78
GTF3A-204ENST00000438571 KRTAP9-6A0A140TA67 174 aa10.19□□□□□ -0.78
GTF3A-204ENST00000438571 B5MCH6 92 aa10.19□□□□□ -0.78
GTF3A-204ENST00000438571 HSBP1O75506 76 aa10.19□□□□□ -0.78
GTF3A-204ENST00000438571 COA6Q5JTJ3 125 aaKnown RBP10.19□□□□□ -0.78
GTF3A-204ENST00000438571 TMA7Q9Y2S6 64 aaKnown RBP10.19□□□□□ -0.78
GTF3A-204ENST00000438571 IGLV9-49A0A0B4J1Y8 123 aa10.18□□□□□ -0.78
GTF3A-204ENST00000438571 Q9BRP9 147 aa10.18□□□□□ -0.78
GTF3A-204ENST00000438571 SPINK1P00995 79 aa10.17□□□□□ -0.78
GTF3A-204ENST00000438571 ASB16-AS1Q495Z4 193 aa10.17□□□□□ -0.78
GTF3A-204ENST00000438571 MYMXA0A1B0GTQ4 84 aa10.16□□□□□ -0.78
GTF3A-204ENST00000438571 Q8N377 158 aa10.15□□□□□ -0.78
GTF3A-204ENST00000438571 S100A6P06703 90 aa10.14□□□□□ -0.79
GTF3A-204ENST00000438571 DDTP30046 118 aa10.14□□□□□ -0.79
GTF3A-204ENST00000438571 SNRPEP62304 92 aaKnown RBP10.14□□□□□ -0.79
GTF3A-204ENST00000438571 LOC107984156A0A0G2JMH3 177 aa10.13□□□□□ -0.79
GTF3A-204ENST00000438571 LEPROTO15243 131 aa10.13□□□□□ -0.79
GTF3A-204ENST00000438571 FABP4P15090 132 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 321.1 ms