RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 GAGE2EQ4V326 116 aa6.75□□□□□ -1.33
HLA-DMB-259ENST00000438510 C2orf91Q6ZV80 131 aa6.75□□□□□ -1.33
HLA-DMB-259ENST00000438510 SPACA4Q8TDM5 124 aa6.75□□□□□ -1.33
HLA-DMB-259ENST00000438510 GAGE2DQ9UEU5 116 aa6.75□□□□□ -1.33
HLA-DMB-259ENST00000438510 CHTF8P0CG12 524 aa6.74□□□□□ -1.33
HLA-DMB-259ENST00000438510 HINT1P49773 126 aaPredicted RBP6.74□□□□□ -1.33
HLA-DMB-259ENST00000438510 LINC00158P58513 81 aa6.74□□□□□ -1.33
HLA-DMB-259ENST00000438510 DPH3Q96FX2 82 aa6.74□□□□□ -1.33
HLA-DMB-259ENST00000438510 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.74□□□□□ -1.33
HLA-DMB-259ENST00000438510 DYNC1H1Q14204 4646 aaKnown RBP6.73□□□□□ -1.33
HLA-DMB-259ENST00000438510 A0A0J9YXY3 114 aa6.73□□□□□ -1.33
HLA-DMB-259ENST00000438510 SMIM13P0DJ93 91 aa6.73□□□□□ -1.33
HLA-DMB-259ENST00000438510 BATFQ16520 125 aa6.73□□□□□ -1.33
HLA-DMB-259ENST00000438510 SCGB1D4Q6XE38 83 aa6.73□□□□□ -1.33
HLA-DMB-259ENST00000438510 FAM30AQ9NZY2 134 aa6.73□□□□□ -1.33
HLA-DMB-259ENST00000438510 A0A0U1RRA0 63 aa6.72□□□□□ -1.33
HLA-DMB-259ENST00000438510 TIMM17BO60830 172 aa6.72□□□□□ -1.33
HLA-DMB-259ENST00000438510 CDK2AP2O75956 126 aa6.72□□□□□ -1.33
HLA-DMB-259ENST00000438510 PCP2Q8IVA1 136 aa6.72□□□□□ -1.33
HLA-DMB-259ENST00000438510 TTTY13Q9BZ97 58 aa6.72□□□□□ -1.33
HLA-DMB-259ENST00000438510 LRP1BQ9NZR2 4599 aa6.72□□□□□ -1.33
HLA-DMB-259ENST00000438510 DNAH8Q96JB1 4490 aa6.71□□□□□ -1.33
HLA-DMB-259ENST00000438510 TMEM238C9JI98 176 aa6.71□□□□□ -1.34
HLA-DMB-259ENST00000438510 PANO1I0J062 215 aa6.71□□□□□ -1.34
HLA-DMB-259ENST00000438510 SCXQ7RTU7 201 aa6.71□□□□□ -1.34
HLA-DMB-259ENST00000438510 MIR7-3HGQ8N6C7 128 aa6.71□□□□□ -1.34
HLA-DMB-259ENST00000438510 SND1-IT1Q9HBX3 110 aa6.71□□□□□ -1.34
HLA-DMB-259ENST00000438510 XAGE1AQ9HD64 81 aa6.71□□□□□ -1.34
HLA-DMB-259ENST00000438510 A0A087WYN8 130 aa6.7□□□□□ -1.34
HLA-DMB-259ENST00000438510 TMEM238LA0A1B0GVL6 79 aa6.7□□□□□ -1.34
HLA-DMB-259ENST00000438510 A6NJY4 79 aa6.7□□□□□ -1.34
HLA-DMB-259ENST00000438510 C9orf129Q5T035 196 aaKnown RBP6.7□□□□□ -1.34
HLA-DMB-259ENST00000438510 PLAC8Q9NZF1 115 aa6.7□□□□□ -1.34
HLA-DMB-259ENST00000438510 CIRBP-AS1Q8TBR5 109 aa6.69□□□□□ -1.34
HLA-DMB-259ENST00000438510 TAX1BP3O14907 124 aa6.68□□□□□ -1.34
HLA-DMB-259ENST00000438510 XGP55808 180 aa6.68□□□□□ -1.34
HLA-DMB-259ENST00000438510 RPL24P83731 157 aaKnown RBP6.68□□□□□ -1.34
HLA-DMB-259ENST00000438510 UBE2V1Q13404 147 aa6.68□□□□□ -1.34
HLA-DMB-259ENST00000438510 FAM19A5Q7Z5A7 132 aaPredicted RBP6.68□□□□□ -1.34
HLA-DMB-259ENST00000438510 DAND5Q8N907 189 aa6.68□□□□□ -1.34
HLA-DMB-259ENST00000438510 COPS9Q8WXC6 57 aa6.68□□□□□ -1.34
HLA-DMB-259ENST00000438510 SPANXB1Q9NS25 103 aaPredicted RBP6.68□□□□□ -1.34
HLA-DMB-259ENST00000438510 TP73-AS1Q9UF72 201 aa6.68□□□□□ -1.34
HLA-DMB-259ENST00000438510 PLA2G2DQ9UNK4 145 aa6.68□□□□□ -1.34
HLA-DMB-259ENST00000438510 HERC2O95714 4834 aa6.67□□□□□ -1.34
HLA-DMB-259ENST00000438510 A0A1W2PNN7 141 aa6.67□□□□□ -1.34
HLA-DMB-259ENST00000438510 FAM168BA1KXE4 195 aa6.67□□□□□ -1.34
HLA-DMB-259ENST00000438510 HAMPP81172 84 aa6.67□□□□□ -1.34
HLA-DMB-259ENST00000438510 Q6ZVH6 145 aa6.67□□□□□ -1.34
HLA-DMB-259ENST00000438510 CEND1Q8N111 149 aa6.67□□□□□ -1.34
HLA-DMB-259ENST00000438510 LITAFQ99732 161 aa6.67□□□□□ -1.34
HLA-DMB-259ENST00000438510 SPANXDQ9BXN6 97 aa6.67□□□□□ -1.34
HLA-DMB-259ENST00000438510 SPANXCQ9NY87 97 aa6.67□□□□□ -1.34
HLA-DMB-259ENST00000438510 LOC107984156A0A0G2JMH3 177 aa6.66□□□□□ -1.34
HLA-DMB-259ENST00000438510 A0A1B0GWB2 263 aa6.66□□□□□ -1.34
HLA-DMB-259ENST00000438510 C9orf118A6NHY6 69 aa6.66□□□□□ -1.34
HLA-DMB-259ENST00000438510 EPM2AB3EWF7 344 aa6.66□□□□□ -1.34
HLA-DMB-259ENST00000438510 M0QXV9 152 aa6.66□□□□□ -1.34
HLA-DMB-259ENST00000438510 ADAMTSL4-AS1Q5T5F5 129 aa6.66□□□□□ -1.34
HLA-DMB-259ENST00000438510 GTF2H5Q6ZYL4 71 aa6.66□□□□□ -1.34
HLA-DMB-259ENST00000438510 ARL17AQ8IVW1 177 aa6.66□□□□□ -1.34
HLA-DMB-259ENST00000438510 NKAPP1Q8N9T2 125 aa6.66□□□□□ -1.34
HLA-DMB-259ENST00000438510 APOBP04114 4563 aaKnown RBP6.65□□□□□ -1.34
HLA-DMB-259ENST00000438510 IGLV5-37A0A075B6J1 123 aa6.65□□□□□ -1.34
HLA-DMB-259ENST00000438510 SERTAD4-AS1Q5TG53 156 aa6.65□□□□□ -1.34
HLA-DMB-259ENST00000438510 C7orf33Q8WU49 177 aa6.65□□□□□ -1.34
HLA-DMB-259ENST00000438510 VPREB1P12018 145 aa6.64□□□□□ -1.35
HLA-DMB-259ENST00000438510 IFITM1P13164 125 aa6.64□□□□□ -1.35
HLA-DMB-259ENST00000438510 NPC2P61916 151 aa6.64□□□□□ -1.35
HLA-DMB-259ENST00000438510 SRSF9Q13242 221 aaKnown RBP eCLIP6.64□□□□□ -1.35
HLA-DMB-259ENST00000438510 LINC00308Q8TCZ7 52 aa6.64□□□□□ -1.35
HLA-DMB-259ENST00000438510 HIST1H4GQ99525 98 aa6.64□□□□□ -1.35
HLA-DMB-259ENST00000438510 PPDPFQ9H3Y8 114 aa6.64□□□□□ -1.35
HLA-DMB-259ENST00000438510 C22orf24Q9Y442 160 aa6.64□□□□□ -1.35
HLA-DMB-259ENST00000438510 NDUFC2O95298 119 aa6.63□□□□□ -1.35
HLA-DMB-259ENST00000438510 VAMP3Q15836 100 aa6.63□□□□□ -1.35
HLA-DMB-259ENST00000438510 LYRM7Q5U5X0 104 aa6.63□□□□□ -1.35
HLA-DMB-259ENST00000438510 MRPL55Q7Z7F7 128 aaKnown RBP6.63□□□□□ -1.35
HLA-DMB-259ENST00000438510 UBE2BP63146 152 aa6.62□□□□□ -1.35
HLA-DMB-259ENST00000438510 SOSTDC1Q6X4U4 206 aa6.62□□□□□ -1.35
HLA-DMB-259ENST00000438510 PHF5AQ7RTV0 110 aaKnown RBP6.62□□□□□ -1.35
HLA-DMB-259ENST00000438510 KRTAP7-1Q8IUC3 87 aa6.62□□□□□ -1.35
HLA-DMB-259ENST00000438510 FABP2P12104 132 aa6.61□□□□□ -1.35
HLA-DMB-259ENST00000438510 XP32Q5T750 250 aa6.61□□□□□ -1.35
HLA-DMB-259ENST00000438510 TRBV10-2A0A0K0K1G8 114 aa6.6□□□□□ -1.35
HLA-DMB-259ENST00000438510 A0A1W2PPM0 123 aa6.6□□□□□ -1.35
HLA-DMB-259ENST00000438510 FAM229AH3BQW9 127 aa6.6□□□□□ -1.35
HLA-DMB-259ENST00000438510 M0R378 163 aa6.6□□□□□ -1.35
HLA-DMB-259ENST00000438510 NCR3O14931 201 aa6.6□□□□□ -1.35
HLA-DMB-259ENST00000438510 SMR3BP02814 79 aaPredicted RBP6.6□□□□□ -1.35
HLA-DMB-259ENST00000438510 MUSTN1Q8IVN3 82 aa6.6□□□□□ -1.35
HLA-DMB-259ENST00000438510 Q8NDZ9 215 aa6.6□□□□□ -1.35
HLA-DMB-259ENST00000438510 RYR1P21817 5038 aa6.59□□□□□ -1.35
HLA-DMB-259ENST00000438510 GAGE10A6NGK3 116 aa6.59□□□□□ -1.35
HLA-DMB-259ENST00000438510 EIF4EBP3O60516 100 aaPredicted RBP6.59□□□□□ -1.35
HLA-DMB-259ENST00000438510 FXYD2P54710 66 aa6.59□□□□□ -1.35
HLA-DMB-259ENST00000438510 LINC00167Q96N53 147 aa6.59□□□□□ -1.35
HLA-DMB-259ENST00000438510 KIAA1109Q2LD37 5005 aa6.59□□□□□ -1.35
HLA-DMB-259ENST00000438510 K7EP34 96 aa6.58□□□□□ -1.36
HLA-DMB-259ENST00000438510 PCLOQ9Y6V0 5065 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms