RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 SMIM27A0A1W2PRY6 76 aa4.7□□□□□ -1.66
NIF3L1-208ENST00000436412 C2orf66Q6UXQ4 117 aa4.7□□□□□ -1.66
NIF3L1-208ENST00000436412 BATF3Q9NR55 127 aa4.7□□□□□ -1.66
NIF3L1-208ENST00000436412 IGKV2-28A0A075B6P5 120 aa4.69□□□□□ -1.66
NIF3L1-208ENST00000436412 ATP6V1G1O75348 118 aa4.69□□□□□ -1.66
NIF3L1-208ENST00000436412 SPINK1P00995 79 aa4.69□□□□□ -1.66
NIF3L1-208ENST00000436412 IGKV2D-28P01615 120 aa4.69□□□□□ -1.66
NIF3L1-208ENST00000436412 KRTAP10-5P60370 271 aa4.69□□□□□ -1.66
NIF3L1-208ENST00000436412 PRLHP81277 87 aa4.69□□□□□ -1.66
NIF3L1-208ENST00000436412 PAPPA-AS1Q5QFB9 102 aa4.69□□□□□ -1.66
NIF3L1-208ENST00000436412 FAM19A1Q7Z5A9 133 aa4.69□□□□□ -1.66
NIF3L1-208ENST00000436412 ORMDL3Q8N138 153 aa4.69□□□□□ -1.66
NIF3L1-208ENST00000436412 DAND5Q8N907 189 aa4.69□□□□□ -1.66
NIF3L1-208ENST00000436412 KRTAP4-4Q9BYR3 166 aa4.69□□□□□ -1.66
NIF3L1-208ENST00000436412 TMEM126AQ9H061 195 aa4.69□□□□□ -1.66
NIF3L1-208ENST00000436412 CDKN2A-AS1Q9UH64 79 aa4.69□□□□□ -1.66
NIF3L1-208ENST00000436412 NDUFA12Q9UI09 145 aa4.69□□□□□ -1.66
NIF3L1-208ENST00000436412 CYSLTR1Q9Y271 337 aa4.69□□□□□ -1.66
NIF3L1-208ENST00000436412 A0A0A0MQY5 61 aa4.68□□□□□ -1.66
NIF3L1-208ENST00000436412 TMEM136Q6ZRR5 245 aa4.68□□□□□ -1.66
NIF3L1-208ENST00000436412 CBLN2Q8IUK8 224 aa4.68□□□□□ -1.66
NIF3L1-208ENST00000436412 FAM19A2Q8N3H0 131 aa4.68□□□□□ -1.66
NIF3L1-208ENST00000436412 PRELID3AQ96N28 172 aa4.68□□□□□ -1.66
NIF3L1-208ENST00000436412 GEMIN7Q9H840 131 aaKnown RBP4.68□□□□□ -1.66
NIF3L1-208ENST00000436412 LAMTOR2Q9Y2Q5 125 aa4.68□□□□□ -1.66
NIF3L1-208ENST00000436412 A0A1B0GXF2 115 aa4.67□□□□□ -1.66
NIF3L1-208ENST00000436412 PCP4L1A6NKN8 68 aa4.67□□□□□ -1.66
NIF3L1-208ENST00000436412 MT1HP80294 61 aa4.67□□□□□ -1.66
NIF3L1-208ENST00000436412 PDZD11Q5EBL8 140 aa4.67□□□□□ -1.66
NIF3L1-208ENST00000436412 ZC2HC1BQ5TFG8 222 aa4.67□□□□□ -1.66
NIF3L1-208ENST00000436412 ZNF706Q9Y5V0 76 aaPredicted RBP4.67□□□□□ -1.66
NIF3L1-208ENST00000436412 IGIPA6NJ69 53 aa4.66□□□□□ -1.66
NIF3L1-208ENST00000436412 K7EMI3 77 aa4.66□□□□□ -1.66
NIF3L1-208ENST00000436412 G0S2P27469 103 aa4.66□□□□□ -1.66
NIF3L1-208ENST00000436412 KRTAP19-2Q3LHN2 52 aa4.66□□□□□ -1.66
NIF3L1-208ENST00000436412 ORMDL2Q53FV1 153 aa4.66□□□□□ -1.66
NIF3L1-208ENST00000436412 MRPL54Q6P161 138 aaKnown RBP4.66□□□□□ -1.66
NIF3L1-208ENST00000436412 Q8NBF4 154 aa4.66□□□□□ -1.66
NIF3L1-208ENST00000436412 COX7B2Q8TF08 81 aa4.66□□□□□ -1.66
NIF3L1-208ENST00000436412 SPRR4Q96PI1 79 aa4.66□□□□□ -1.66
NIF3L1-208ENST00000436412 SMIM1B2RUZ4 78 aa4.65□□□□□ -1.67
NIF3L1-208ENST00000436412 HSBP1L1C9JCN9 74 aa4.65□□□□□ -1.67
NIF3L1-208ENST00000436412 TMEM238C9JI98 176 aa4.65□□□□□ -1.67
NIF3L1-208ENST00000436412 M0R378 163 aa4.65□□□□□ -1.67
NIF3L1-208ENST00000436412 SRP19P09132 144 aaKnown RBP4.65□□□□□ -1.67
NIF3L1-208ENST00000436412 RAB5BP61020 215 aa4.65□□□□□ -1.67
NIF3L1-208ENST00000436412 RPS29P62273 56 aaKnown RBP4.65□□□□□ -1.67
NIF3L1-208ENST00000436412 RPL23P62829 140 aaKnown RBP4.65□□□□□ -1.67
NIF3L1-208ENST00000436412 RPL24P83731 157 aaKnown RBP4.65□□□□□ -1.67
NIF3L1-208ENST00000436412 ATP5L2Q7Z4Y8 100 aa4.65□□□□□ -1.67
NIF3L1-208ENST00000436412 Q8N8P6 123 aa4.65□□□□□ -1.67
NIF3L1-208ENST00000436412 HIGD2AQ9BW72 106 aa4.65□□□□□ -1.67
NIF3L1-208ENST00000436412 MAP1LC3AQ9H492 121 aa4.65□□□□□ -1.67
NIF3L1-208ENST00000436412 LOC389332A0A1B0GUA5 103 aa4.64□□□□□ -1.67
NIF3L1-208ENST00000436412 SCO1O75880 301 aa4.64□□□□□ -1.67
NIF3L1-208ENST00000436412 S100A6P06703 90 aa4.64□□□□□ -1.67
NIF3L1-208ENST00000436412 ADIRFQ15847 76 aa4.64□□□□□ -1.67
NIF3L1-208ENST00000436412 TCTE3Q8IZS6 198 aa4.64□□□□□ -1.67
NIF3L1-208ENST00000436412 TIMM17AQ99595 171 aa4.64□□□□□ -1.67
NIF3L1-208ENST00000436412 NAT8Q9UHE5 227 aa4.64□□□□□ -1.67
NIF3L1-208ENST00000436412 FLGP20930 4061 aaPredicted RBP4.63□□□□□ -1.67
NIF3L1-208ENST00000436412 IGLV5-45A0A087WSX0 123 aa4.63□□□□□ -1.67
NIF3L1-208ENST00000436412 TINCRA0A1B0GVN0 87 aa4.63□□□□□ -1.67
NIF3L1-208ENST00000436412 ATP5LO75964 103 aa4.63□□□□□ -1.67
NIF3L1-208ENST00000436412 SNRPEP62304 92 aaKnown RBP4.63□□□□□ -1.67
NIF3L1-208ENST00000436412 ALKAL2Q6UX46 152 aa4.63□□□□□ -1.67
NIF3L1-208ENST00000436412 SLC25A20O43772 301 aa4.62□□□□□ -1.67
NIF3L1-208ENST00000436412 NXT2Q9NPJ8 142 aaKnown RBP4.62□□□□□ -1.67
NIF3L1-208ENST00000436412 GAGE2AQ6NT46 116 aa4.61□□□□□ -1.67
NIF3L1-208ENST00000436412 Q8N377 158 aa4.61□□□□□ -1.67
NIF3L1-208ENST00000436412 SND1-IT1Q9HBX3 110 aa4.61□□□□□ -1.67
NIF3L1-208ENST00000436412 PFN2P35080 140 aa4.6□□□□□ -1.67
NIF3L1-208ENST00000436412 COX17Q14061 63 aa4.6□□□□□ -1.67
NIF3L1-208ENST00000436412 LCE1FQ5T754 118 aa4.6□□□□□ -1.67
NIF3L1-208ENST00000436412 SSBP3-AS1Q7Z2R9 100 aa4.6□□□□□ -1.67
NIF3L1-208ENST00000436412 ERASQ7Z444 233 aa4.6□□□□□ -1.67
NIF3L1-208ENST00000436412 TOMM6Q96B49 74 aa4.6□□□□□ -1.67
NIF3L1-208ENST00000436412 A0A0U1RRA0 63 aa4.59□□□□□ -1.67
NIF3L1-208ENST00000436412 LINC01549A6NIU2 74 aa4.59□□□□□ -1.67
NIF3L1-208ENST00000436412 H3BRM9 83 aa4.59□□□□□ -1.67
NIF3L1-208ENST00000436412 SPINK8P0C7L1 97 aa4.59□□□□□ -1.67
NIF3L1-208ENST00000436412 RAB14P61106 215 aa4.59□□□□□ -1.67
NIF3L1-208ENST00000436412 LINC00483Q53H64 154 aa4.59□□□□□ -1.67
NIF3L1-208ENST00000436412 IGLV8-61A0A075B6I0 122 aa4.58□□□□□ -1.68
NIF3L1-208ENST00000436412 M0R2T5 61 aa4.58□□□□□ -1.68
NIF3L1-208ENST00000436412 PCOTHQ58A44 107 aa4.58□□□□□ -1.68
NIF3L1-208ENST00000436412 AKAP14Q86UN6 197 aa4.58□□□□□ -1.68
NIF3L1-208ENST00000436412 SCGB3A1Q96QR1 104 aa4.58□□□□□ -1.68
NIF3L1-208ENST00000436412 ERG28Q9UKR5 140 aa4.58□□□□□ -1.68
NIF3L1-208ENST00000436412 SFTA2Q6UW10 78 aa4.57□□□□□ -1.68
NIF3L1-208ENST00000436412 SMIM29Q86T20 159 aa4.57□□□□□ -1.68
NIF3L1-208ENST00000436412 CST9LQ9H4G1 147 aa4.57□□□□□ -1.68
NIF3L1-208ENST00000436412 Q8NDZ9 215 aa4.56□□□□□ -1.68
NIF3L1-208ENST00000436412 SMCR5Q8TEV8 140 aa4.56□□□□□ -1.68
NIF3L1-208ENST00000436412 C9JQL5 133 aa4.55□□□□□ -1.68
NIF3L1-208ENST00000436412 SPRR1AP35321 89 aa4.55□□□□□ -1.68
NIF3L1-208ENST00000436412 KRTAP10-12P60413 245 aa4.55□□□□□ -1.68
NIF3L1-208ENST00000436412 MOBPQ13875 183 aa4.55□□□□□ -1.68
NIF3L1-208ENST00000436412 PEA15Q15121 130 aa4.55□□□□□ -1.68
NIF3L1-208ENST00000436412 PMVKQ15126 192 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms