RNA–Protein interactions for RNA: ENST00000436354.2

UBXN1-203, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-203ENST00000436354 C9orf116Q5BN46 136 aaPredicted RBP11.17□□□□□ -0.62
UBXN1-203ENST00000436354 PRR26Q8N8Z3 221 aa11.17□□□□□ -0.62
UBXN1-203ENST00000436354 JOSD1Q15040 202 aaPredicted RBP11.16□□□□□ -0.62
UBXN1-203ENST00000436354 ATOH7Q8N100 152 aa11.16□□□□□ -0.62
UBXN1-203ENST00000436354 DIRC1Q969H9 104 aa11.16□□□□□ -0.62
UBXN1-203ENST00000436354 J3QQQ9 107 aa11.15□□□□□ -0.62
UBXN1-203ENST00000436354 SCGB1D1O95968 90 aa11.15□□□□□ -0.62
UBXN1-203ENST00000436354 TLX1NBP0CAT3 122 aa11.15□□□□□ -0.62
UBXN1-203ENST00000436354 RPL18AQ02543 176 aaKnown RBP11.14□□□□□ -0.63
UBXN1-203ENST00000436354 PHF5AQ7RTV0 110 aaKnown RBP11.14□□□□□ -0.63
UBXN1-203ENST00000436354 IGLV7-43P04211 117 aa11.13□□□□□ -0.63
UBXN1-203ENST00000436354 NMUP48645 174 aa11.13□□□□□ -0.63
UBXN1-203ENST00000436354 NDUFA12Q9UI09 145 aa11.13□□□□□ -0.63
UBXN1-203ENST00000436354 IGKV2D-26A0A0A0MRZ7 120 aa11.12□□□□□ -0.63
UBXN1-203ENST00000436354 ANKRD39Q53RE8 183 aa11.12□□□□□ -0.63
UBXN1-203ENST00000436354 LGALS3P17931 250 aaKnown RBP11.11□□□□□ -0.63
UBXN1-203ENST00000436354 HERV-K104P63124 156 aa11.11□□□□□ -0.63
UBXN1-203ENST00000436354 MYMXA0A1B0GTQ4 84 aa11.1□□□□□ -0.63
UBXN1-203ENST00000436354 NDUFC2-KCTD14E9PQ53 114 aa11.1□□□□□ -0.63
UBXN1-203ENST00000436354 PYY3Q5JQD4 70 aa11.1□□□□□ -0.63
UBXN1-203ENST00000436354 IGLV1-50A0A075B6I6 118 aa11.09□□□□□ -0.63
UBXN1-203ENST00000436354 A0A0U1RQV1 116 aa11.09□□□□□ -0.63
UBXN1-203ENST00000436354 H0Y9J4 135 aa11.09□□□□□ -0.63
UBXN1-203ENST00000436354 HSBP1L1C9JCN9 74 aa11.08□□□□□ -0.64
UBXN1-203ENST00000436354 COX17Q14061 63 aa11.08□□□□□ -0.64
UBXN1-203ENST00000436354 KRTAP9-2Q9BYQ4 174 aa11.08□□□□□ -0.64
UBXN1-203ENST00000436354 ERG28Q9UKR5 140 aa11.08□□□□□ -0.64
UBXN1-203ENST00000436354 PRR4Q16378 134 aa11.07□□□□□ -0.64
UBXN1-203ENST00000436354 LINC00587B1AMM8 73 aa11.04□□□□□ -0.64
UBXN1-203ENST00000436354 TTTY13Q9BZ97 58 aa11.04□□□□□ -0.64
UBXN1-203ENST00000436354 A0A0J9YXY3 114 aa11.03□□□□□ -0.64
UBXN1-203ENST00000436354 LOC105371267A0A1B0GV96 52 aa11.03□□□□□ -0.64
UBXN1-203ENST00000436354 ZNF815PA8K554 130 aa11.03□□□□□ -0.64
UBXN1-203ENST00000436354 KRTAP11-1Q8IUC1 163 aa11.03□□□□□ -0.64
UBXN1-203ENST00000436354 KRTAP1-4P0C5Y4 121 aa11.02□□□□□ -0.65
UBXN1-203ENST00000436354 PFN2P35080 140 aa11.02□□□□□ -0.65
UBXN1-203ENST00000436354 RPL13AP40429 203 aaKnown RBP11.02□□□□□ -0.65
UBXN1-203ENST00000436354 PCP2Q8IVA1 136 aa11.02□□□□□ -0.65
UBXN1-203ENST00000436354 FAM168BA1KXE4 195 aa11.01□□□□□ -0.65
UBXN1-203ENST00000436354 GAGE2EQ4V326 116 aa11.01□□□□□ -0.65
UBXN1-203ENST00000436354 MEIG1Q5JSS6 88 aa11.01□□□□□ -0.65
UBXN1-203ENST00000436354 C9orf129Q5T035 196 aaKnown RBP11.01□□□□□ -0.65
UBXN1-203ENST00000436354 VAMP8Q9BV40 100 aa11.01□□□□□ -0.65
UBXN1-203ENST00000436354 GAGE2DQ9UEU5 116 aa11.01□□□□□ -0.65
UBXN1-203ENST00000436354 TIMM17BO60830 172 aa11□□□□□ -0.65
UBXN1-203ENST00000436354 SMIM13P0DJ93 91 aa11□□□□□ -0.65
UBXN1-203ENST00000436354 FAM19A5Q7Z5A7 132 aaPredicted RBP11□□□□□ -0.65
UBXN1-203ENST00000436354 LINC00158P58513 81 aa10.99□□□□□ -0.65
UBXN1-203ENST00000436354 LITAFQ99732 161 aa10.99□□□□□ -0.65
UBXN1-203ENST00000436354 PAM16Q9Y3D7 125 aa10.99□□□□□ -0.65
UBXN1-203ENST00000436354 MUC2Q02817 5179 aa10.98□□□□□ -0.65
UBXN1-203ENST00000436354 COX8AP10176 69 aa10.98□□□□□ -0.65
UBXN1-203ENST00000436354 SPATA45Q537H7 98 aa10.98□□□□□ -0.65
UBXN1-203ENST00000436354 SND1-IT1Q9HBX3 110 aa10.98□□□□□ -0.65
UBXN1-203ENST00000436354 UBE2BP63146 152 aa10.97□□□□□ -0.65
UBXN1-203ENST00000436354 BOD1L2Q8IYS8 172 aa10.97□□□□□ -0.65
UBXN1-203ENST00000436354 MIR7-3HGQ8N6C7 128 aa10.97□□□□□ -0.65
UBXN1-203ENST00000436354 XAGE1AQ9HD64 81 aa10.97□□□□□ -0.65
UBXN1-203ENST00000436354 DLEU1O43261 78 aa10.96□□□□□ -0.65
UBXN1-203ENST00000436354 SMIM6P0DI80 62 aa10.96□□□□□ -0.65
UBXN1-203ENST00000436354 LOC107984156A0A0G2JMH3 177 aa10.95□□□□□ -0.66
UBXN1-203ENST00000436354 A0A0U1RRA0 63 aa10.95□□□□□ -0.66
UBXN1-203ENST00000436354 M0QXV9 152 aa10.95□□□□□ -0.66
UBXN1-203ENST00000436354 KRTAP7-1Q8IUC3 87 aa10.95□□□□□ -0.66
UBXN1-203ENST00000436354 ARL17AQ8IVW1 177 aa10.95□□□□□ -0.66
UBXN1-203ENST00000436354 ADAMTSL4-AS1Q5T5F5 129 aa10.94□□□□□ -0.66
UBXN1-203ENST00000436354 SCGB1D4Q6XE38 83 aa10.93□□□□□ -0.66
UBXN1-203ENST00000436354 TMEM238C9JI98 176 aa10.92□□□□□ -0.66
UBXN1-203ENST00000436354 DAND5Q8N907 189 aa10.92□□□□□ -0.66
UBXN1-203ENST00000436354 SPANXDQ9BXN6 97 aa10.92□□□□□ -0.66
UBXN1-203ENST00000436354 SPANXCQ9NY87 97 aa10.92□□□□□ -0.66
UBXN1-203ENST00000436354 IGLV5-37A0A075B6J1 123 aa10.91□□□□□ -0.66
UBXN1-203ENST00000436354 C14orf144Q96I85 54 aa10.91□□□□□ -0.66
UBXN1-203ENST00000436354 TP73-AS1Q9UF72 201 aa10.91□□□□□ -0.66
UBXN1-203ENST00000436354 S100A12P80511 92 aa10.9□□□□□ -0.66
UBXN1-203ENST00000436354 LCE2AQ5TA79 106 aaPredicted RBP10.9□□□□□ -0.66
UBXN1-203ENST00000436354 PPDPFQ9H3Y8 114 aa10.9□□□□□ -0.66
UBXN1-203ENST00000436354 TSPAN13O95857 204 aa10.89□□□□□ -0.67
UBXN1-203ENST00000436354 VPREB1P12018 145 aa10.89□□□□□ -0.67
UBXN1-203ENST00000436354 SLC25A34Q6PIV7 304 aa10.89□□□□□ -0.67
UBXN1-203ENST00000436354 Q6ZVH6 145 aa10.89□□□□□ -0.67
UBXN1-203ENST00000436354 Q8NDZ9 215 aa10.89□□□□□ -0.67
UBXN1-203ENST00000436354 SPANXB1Q9NS25 103 aaPredicted RBP10.89□□□□□ -0.67
UBXN1-203ENST00000436354 ZNF861PO60384 105 aa10.88□□□□□ -0.67
UBXN1-203ENST00000436354 SOSTDC1Q6X4U4 206 aa10.88□□□□□ -0.67
UBXN1-203ENST00000436354 LINC00308Q8TCZ7 52 aa10.87□□□□□ -0.67
UBXN1-203ENST00000436354 EIF4EBP3O60516 100 aaPredicted RBP10.86□□□□□ -0.67
UBXN1-203ENST00000436354 RPL24P83731 157 aaKnown RBP10.86□□□□□ -0.67
UBXN1-203ENST00000436354 HIGD1BQ9P298 99 aa10.86□□□□□ -0.67
UBXN1-203ENST00000436354 C22orf24Q9Y442 160 aa10.86□□□□□ -0.67
UBXN1-203ENST00000436354 KRTAP9-6A0A140TA67 174 aa10.85□□□□□ -0.67
UBXN1-203ENST00000436354 NDUFC2O95298 119 aa10.85□□□□□ -0.67
UBXN1-203ENST00000436354 IFITM1P13164 125 aa10.85□□□□□ -0.67
UBXN1-203ENST00000436354 C2orf91Q6ZV80 131 aa10.85□□□□□ -0.67
UBXN1-203ENST00000436354 MIEN1Q9BRT3 115 aa10.85□□□□□ -0.67
UBXN1-203ENST00000436354 NPC2P61916 151 aa10.83□□□□□ -0.68
UBXN1-203ENST00000436354 MRPL55Q7Z7F7 128 aaKnown RBP10.83□□□□□ -0.68
UBXN1-203ENST00000436354 COPS9Q8WXC6 57 aa10.83□□□□□ -0.68
UBXN1-203ENST00000436354 NKAPP1Q8N9T2 125 aa10.82□□□□□ -0.68
UBXN1-203ENST00000436354 LBHQ53QV2 105 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms