RNA–Protein interactions for RNA: ENST00000434152.5

APOE-203, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-203ENST00000434152 LINC00587B1AMM8 73 aa12.53□□□□□ -0.4
APOE-203ENST00000434152 PSORS1C2Q9UIG4 136 aa12.53□□□□□ -0.4
APOE-203ENST00000434152 J3QQQ9 107 aa12.52□□□□□ -0.41
APOE-203ENST00000434152 LGALS3P17931 250 aaKnown RBP12.52□□□□□ -0.41
APOE-203ENST00000434152 LINC00158P58513 81 aa12.52□□□□□ -0.41
APOE-203ENST00000434152 LBHQ53QV2 105 aaPredicted RBP12.52□□□□□ -0.41
APOE-203ENST00000434152 MEIG1Q5JSS6 88 aa12.52□□□□□ -0.41
APOE-203ENST00000434152 C22orf24Q9Y442 160 aa12.52□□□□□ -0.41
APOE-203ENST00000434152 IGLV5-37A0A075B6J1 123 aa12.51□□□□□ -0.41
APOE-203ENST00000434152 UBE2BP63146 152 aa12.51□□□□□ -0.41
APOE-203ENST00000434152 HIST3H2BBQ8N257 126 aa12.51□□□□□ -0.41
APOE-203ENST00000434152 NMUP48645 174 aa12.5□□□□□ -0.41
APOE-203ENST00000434152 TSPEAR-AS2P59090 65 aa12.5□□□□□ -0.41
APOE-203ENST00000434152 SND1-IT1Q9HBX3 110 aa12.5□□□□□ -0.41
APOE-203ENST00000434152 E9PLD3 99 aa12.49□□□□□ -0.41
APOE-203ENST00000434152 SRSF9Q13242 221 aaKnown RBP eCLIP12.49□□□□□ -0.41
APOE-203ENST00000434152 SPINK6Q6UWN8 80 aa12.49□□□□□ -0.41
APOE-203ENST00000434152 A0A0U1RRA0 63 aa12.48□□□□□ -0.41
APOE-203ENST00000434152 AKR1D1P51857 326 aa12.48□□□□□ -0.41
APOE-203ENST00000434152 MRPL55Q7Z7F7 128 aaKnown RBP12.48□□□□□ -0.41
APOE-203ENST00000434152 SMIM13P0DJ93 91 aa12.47□□□□□ -0.41
APOE-203ENST00000434152 NKAPP1Q8N9T2 125 aa12.47□□□□□ -0.41
APOE-203ENST00000434152 C1orf137Q5JT78 98 aa12.46□□□□□ -0.41
APOE-203ENST00000434152 KRTAP11-1Q8IUC1 163 aa12.46□□□□□ -0.41
APOE-203ENST00000434152 HIST1H2BLQ99880 126 aa12.46□□□□□ -0.41
APOE-203ENST00000434152 RPL24P83731 157 aaKnown RBP12.45□□□□□ -0.42
APOE-203ENST00000434152 SNRPEP62304 92 aaKnown RBP12.44□□□□□ -0.42
APOE-203ENST00000434152 IGLV7-43P04211 117 aa12.43□□□□□ -0.42
APOE-203ENST00000434152 MIR7-3HGQ8N6C7 128 aa12.43□□□□□ -0.42
APOE-203ENST00000434152 UBR4Q5T4S7 5183 aa12.42□□□□□ -0.42
APOE-203ENST00000434152 VPREB1P12018 145 aa12.42□□□□□ -0.42
APOE-203ENST00000434152 LINC00167Q96N53 147 aa12.42□□□□□ -0.42
APOE-203ENST00000434152 LINC01600Q96MT4 127 aa12.41□□□□□ -0.42
APOE-203ENST00000434152 LOC107984156A0A0G2JMH3 177 aa12.39□□□□□ -0.43
APOE-203ENST00000434152 GAGE10A6NGK3 116 aa12.39□□□□□ -0.43
APOE-203ENST00000434152 REG3GQ6UW15 175 aa12.39□□□□□ -0.43
APOE-203ENST00000434152 ARL17AQ8IVW1 177 aa12.39□□□□□ -0.43
APOE-203ENST00000434152 ATOH7Q8N100 152 aa12.39□□□□□ -0.43
APOE-203ENST00000434152 TNXBP22105 4242 aa12.38□□□□□ -0.43
APOE-203ENST00000434152 C5orf52A6NGY3 159 aa12.38□□□□□ -0.43
APOE-203ENST00000434152 A0A0J9YXY3 114 aa12.37□□□□□ -0.43
APOE-203ENST00000434152 RPL37AP8A6NKH3 93 aa12.37□□□□□ -0.43
APOE-203ENST00000434152 BOD1L2Q8IYS8 172 aa12.37□□□□□ -0.43
APOE-203ENST00000434152 IGKV2D-26A0A0A0MRZ7 120 aa12.36□□□□□ -0.43
APOE-203ENST00000434152 ZNF815PA8K554 130 aa12.36□□□□□ -0.43
APOE-203ENST00000434152 DIRC1Q969H9 104 aa12.36□□□□□ -0.43
APOE-203ENST00000434152 DAND5Q8N907 189 aa12.35□□□□□ -0.43
APOE-203ENST00000434152 Q8NDZ9 215 aa12.35□□□□□ -0.43
APOE-203ENST00000434152 IGLV1-50A0A075B6I6 118 aa12.34□□□□□ -0.43
APOE-203ENST00000434152 MIEN1Q9BRT3 115 aa12.34□□□□□ -0.43
APOE-203ENST00000434152 BCE1O60756 84 aa12.33□□□□□ -0.44
APOE-203ENST00000434152 ANKRD39Q53RE8 183 aa12.33□□□□□ -0.44
APOE-203ENST00000434152 M0R378 163 aa12.32□□□□□ -0.44
APOE-203ENST00000434152 ZNF861PO60384 105 aa12.32□□□□□ -0.44
APOE-203ENST00000434152 KRTAP10-8P60410 259 aa12.32□□□□□ -0.44
APOE-203ENST00000434152 IGKV2-28A0A075B6P5 120 aa12.31□□□□□ -0.44
APOE-203ENST00000434152 HSBP1L1C9JCN9 74 aa12.31□□□□□ -0.44
APOE-203ENST00000434152 H0Y9J4 135 aa12.31□□□□□ -0.44
APOE-203ENST00000434152 TIMM17BO60830 172 aa12.31□□□□□ -0.44
APOE-203ENST00000434152 IGKV2D-28P01615 120 aa12.31□□□□□ -0.44
APOE-203ENST00000434152 SCGB1D1O95968 90 aa12.3□□□□□ -0.44
APOE-203ENST00000434152 TTTY13Q9BZ97 58 aa12.3□□□□□ -0.44
APOE-203ENST00000434152 NCR3O14931 201 aa12.28□□□□□ -0.44
APOE-203ENST00000434152 RPL28P46779 137 aaKnown RBP12.28□□□□□ -0.44
APOE-203ENST00000434152 ADAMTSL4-AS1Q5T5F5 129 aa12.28□□□□□ -0.44
APOE-203ENST00000434152 SCGB1D4Q6XE38 83 aa12.28□□□□□ -0.44
APOE-203ENST00000434152 NDUFC2O95298 119 aa12.27□□□□□ -0.45
APOE-203ENST00000434152 TRBV10-2A0A0K0K1G8 114 aa12.26□□□□□ -0.45
APOE-203ENST00000434152 NPC2P61916 151 aa12.26□□□□□ -0.45
APOE-203ENST00000434152 LITAFQ99732 161 aa12.26□□□□□ -0.45
APOE-203ENST00000434152 KRTAP13-1Q8IUC0 172 aa12.25□□□□□ -0.45
APOE-203ENST00000434152 TMEM126AQ9H061 195 aa12.25□□□□□ -0.45
APOE-203ENST00000434152 UBE2AP49459 152 aa12.24□□□□□ -0.45
APOE-203ENST00000434152 SPANXB1Q9NS25 103 aaPredicted RBP12.24□□□□□ -0.45
APOE-203ENST00000434152 TMEM238C9JI98 176 aa12.23□□□□□ -0.45
APOE-203ENST00000434152 PCP2Q8IVA1 136 aa12.23□□□□□ -0.45
APOE-203ENST00000434152 PRYO14603 147 aa12.22□□□□□ -0.45
APOE-203ENST00000434152 S100A12P80511 92 aa12.22□□□□□ -0.45
APOE-203ENST00000434152 SOSTDC1Q6X4U4 206 aa12.22□□□□□ -0.45
APOE-203ENST00000434152 LINC00308Q8TCZ7 52 aa12.22□□□□□ -0.45
APOE-203ENST00000434152 KCNQ1DNQ9H478 68 aa12.22□□□□□ -0.45
APOE-203ENST00000434152 TMA7Q9Y2S6 64 aaKnown RBP12.21□□□□□ -0.45
APOE-203ENST00000434152 KRTAP1-4P0C5Y4 121 aa12.2□□□□□ -0.46
APOE-203ENST00000434152 FAM19A1Q7Z5A9 133 aa12.2□□□□□ -0.46
APOE-203ENST00000434152 PPDPFQ9H3Y8 114 aa12.2□□□□□ -0.46
APOE-203ENST00000434152 TRBV10-3A0A0K0K1G6 114 aa12.19□□□□□ -0.46
APOE-203ENST00000434152 COPS9Q8WXC6 57 aa12.19□□□□□ -0.46
APOE-203ENST00000434152 SPANXDQ9BXN6 97 aa12.19□□□□□ -0.46
APOE-203ENST00000434152 SPANXCQ9NY87 97 aa12.19□□□□□ -0.46
APOE-203ENST00000434152 LRP2P98164 4655 aa12.18□□□□□ -0.46
APOE-203ENST00000434152 EIF4EBP3O60516 100 aaPredicted RBP12.18□□□□□ -0.46
APOE-203ENST00000434152 DDTP30046 118 aa12.18□□□□□ -0.46
APOE-203ENST00000434152 SPRR1AP35321 89 aa12.18□□□□□ -0.46
APOE-203ENST00000434152 S100A7L2Q5SY68 101 aa12.18□□□□□ -0.46
APOE-203ENST00000434152 Q6ZVH6 145 aa12.18□□□□□ -0.46
APOE-203ENST00000434152 LINC00337Q8N6G1 96 aa12.17□□□□□ -0.46
APOE-203ENST00000434152 IGLV6-57P01721 117 aa12.15□□□□□ -0.46
APOE-203ENST00000434152 IFITM1P13164 125 aa12.15□□□□□ -0.46
APOE-203ENST00000434152 PRLHP81277 87 aa12.15□□□□□ -0.46
APOE-203ENST00000434152 KRTAP4-16G5E9R7 235 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms