RNA–Protein interactions for RNA: ENST00000432588.5

ACTB-205, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 568 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-205ENST00000432588 URB1-AS1Q96HZ7 61 aa9.39□□□□□ -0.91
ACTB-205ENST00000432588 C11orf86A6NJI1 115 aa9.38□□□□□ -0.91
ACTB-205ENST00000432588 PMCHL1Q16048 86 aa9.38□□□□□ -0.91
ACTB-205ENST00000432588 C10orf91Q5T1B1 145 aa9.38□□□□□ -0.91
ACTB-205ENST00000432588 PLEKHB2Q96CS7 222 aa9.38□□□□□ -0.91
ACTB-205ENST00000432588 CDIP1Q9H305 208 aa9.38□□□□□ -0.91
ACTB-205ENST00000432588 LINC00158P58513 81 aa9.37□□□□□ -0.91
ACTB-205ENST00000432588 TPRXLQ17RH7 258 aa9.37□□□□□ -0.91
ACTB-205ENST00000432588 HIGD2AQ9BW72 106 aa9.37□□□□□ -0.91
ACTB-205ENST00000432588 IGLV7-46A0A075B6I9 117 aa9.36□□□□□ -0.91
ACTB-205ENST00000432588 Q8NDZ9 215 aa9.36□□□□□ -0.91
ACTB-205ENST00000432588 CHTOPQ9Y3Y2 248 aaKnown RBP9.35□□□□□ -0.91
ACTB-205ENST00000432588 SPAG11AQ6PDA7 123 aa9.34□□□□□ -0.91
ACTB-205ENST00000432588 ATP6V1G1O75348 118 aa9.33□□□□□ -0.92
ACTB-205ENST00000432588 C3orf22Q8N5N4 141 aa9.33□□□□□ -0.92
ACTB-205ENST00000432588 ZNF706Q9Y5V0 76 aaPredicted RBP9.33□□□□□ -0.92
ACTB-205ENST00000432588 A0A0U1RRA0 63 aa9.31□□□□□ -0.92
ACTB-205ENST00000432588 TMEM223A0PJW6 202 aa9.31□□□□□ -0.92
ACTB-205ENST00000432588 SPRR4Q96PI1 79 aa9.31□□□□□ -0.92
ACTB-205ENST00000432588 TRAV12-1A0A0B4J245 112 aa9.3□□□□□ -0.92
ACTB-205ENST00000432588 C4orf48Q5BLP8 95 aa9.3□□□□□ -0.92
ACTB-205ENST00000432588 PRYO14603 147 aa9.29□□□□□ -0.92
ACTB-205ENST00000432588 BOD1L2Q8IYS8 172 aa9.29□□□□□ -0.92
ACTB-205ENST00000432588 IFI27L1Q96BM0 104 aa9.29□□□□□ -0.92
ACTB-205ENST00000432588 PPDPFQ9H3Y8 114 aa9.29□□□□□ -0.92
ACTB-205ENST00000432588 SMIM13P0DJ93 91 aa9.28□□□□□ -0.92
ACTB-205ENST00000432588 MEIG1Q5JSS6 88 aa9.28□□□□□ -0.92
ACTB-205ENST00000432588 CHCHD1Q96BP2 118 aaKnown RBP9.28□□□□□ -0.92
ACTB-205ENST00000432588 LINC00587B1AMM8 73 aa9.27□□□□□ -0.93
ACTB-205ENST00000432588 SNAPINO95295 136 aa9.27□□□□□ -0.93
ACTB-205ENST00000432588 APOC3P02656 99 aa9.27□□□□□ -0.93
ACTB-205ENST00000432588 HERV-K104P63124 156 aa9.27□□□□□ -0.93
ACTB-205ENST00000432588 NDUFA5Q16718 116 aa9.27□□□□□ -0.93
ACTB-205ENST00000432588 LINC00337Q8N6G1 96 aa9.27□□□□□ -0.93
ACTB-205ENST00000432588 FP248Q71RG6 208 aaPredicted RBP9.26□□□□□ -0.93
ACTB-205ENST00000432588 SVBPQ8N300 66 aa9.26□□□□□ -0.93
ACTB-205ENST00000432588 ETDCA0A1B0GVM5 59 aa9.25□□□□□ -0.93
ACTB-205ENST00000432588 NCR3O14931 201 aa9.25□□□□□ -0.93
ACTB-205ENST00000432588 S100A12P80511 92 aa9.25□□□□□ -0.93
ACTB-205ENST00000432588 LCE2AQ5TA79 106 aaPredicted RBP9.25□□□□□ -0.93
ACTB-205ENST00000432588 MIR7-3HGQ8N6C7 128 aa9.25□□□□□ -0.93
ACTB-205ENST00000432588 KCNQ1DNQ9H478 68 aa9.25□□□□□ -0.93
ACTB-205ENST00000432588 FAT4Q6V0I7 4981 aa9.24□□□□□ -0.93
ACTB-205ENST00000432588 SPRR1AP35321 89 aa9.24□□□□□ -0.93
ACTB-205ENST00000432588 MAP1LC3CQ9BXW4 147 aa9.24□□□□□ -0.93
ACTB-205ENST00000432588 MUC17Q685J3 4493 aa9.23□□□□□ -0.93
ACTB-205ENST00000432588 MYMXA0A1B0GTQ4 84 aa9.23□□□□□ -0.93
ACTB-205ENST00000432588 Q8NBF4 154 aa9.23□□□□□ -0.93
ACTB-205ENST00000432588 SMCR5Q8TEV8 140 aa9.23□□□□□ -0.93
ACTB-205ENST00000432588 KRTAP9-2Q9BYQ4 174 aa9.23□□□□□ -0.93
ACTB-205ENST00000432588 NDUFA12Q9UI09 145 aa9.23□□□□□ -0.93
ACTB-205ENST00000432588 TRBV10-3A0A0K0K1G6 114 aa9.21□□□□□ -0.94
ACTB-205ENST00000432588 HSBP1O75506 76 aa9.21□□□□□ -0.94
ACTB-205ENST00000432588 SPINK1P00995 79 aa9.21□□□□□ -0.94
ACTB-205ENST00000432588 DAND5Q8N907 189 aa9.21□□□□□ -0.94
ACTB-205ENST00000432588 KRTAP4-16G5E9R7 235 aaPredicted RBP9.2□□□□□ -0.94
ACTB-205ENST00000432588 H0Y8G0 127 aa9.18□□□□□ -0.94
ACTB-205ENST00000432588 LINC00483Q53H64 154 aa9.18□□□□□ -0.94
ACTB-205ENST00000432588 FAM19A2Q8N3H0 131 aa9.18□□□□□ -0.94
ACTB-205ENST00000432588 GAGE2AQ6NT46 116 aa9.17□□□□□ -0.94
ACTB-205ENST00000432588 YPEL4Q96NS1 127 aa9.17□□□□□ -0.94
ACTB-205ENST00000432588 KRTAP13-3Q3SY46 172 aa9.16□□□□□ -0.94
ACTB-205ENST00000432588 LOC107984156A0A0G2JMH3 177 aa9.15□□□□□ -0.94
ACTB-205ENST00000432588 TRBV10-2A0A0K0K1G8 114 aa9.15□□□□□ -0.94
ACTB-205ENST00000432588 B5MCH6 92 aa9.15□□□□□ -0.94
ACTB-205ENST00000432588 LEPROTO15243 131 aa9.15□□□□□ -0.94
ACTB-205ENST00000432588 PLNP26678 52 aa9.15□□□□□ -0.94
ACTB-205ENST00000432588 DDTP30046 118 aa9.15□□□□□ -0.94
ACTB-205ENST00000432588 ARL17AQ8IVW1 177 aa9.15□□□□□ -0.94
ACTB-205ENST00000432588 MIEN1Q9BRT3 115 aa9.15□□□□□ -0.94
ACTB-205ENST00000432588 LEPROTL1O95214 131 aa9.14□□□□□ -0.95
ACTB-205ENST00000432588 MOBPQ13875 183 aa9.14□□□□□ -0.95
ACTB-205ENST00000432588 IGLV9-49A0A0B4J1Y8 123 aa9.13□□□□□ -0.95
ACTB-205ENST00000432588 TSPEAR-AS2P59090 65 aa9.13□□□□□ -0.95
ACTB-205ENST00000432588 RPS29P62273 56 aaKnown RBP9.13□□□□□ -0.95
ACTB-205ENST00000432588 SSBP3-AS1Q7Z2R9 100 aa9.13□□□□□ -0.95
ACTB-205ENST00000432588 SPANXB1Q9NS25 103 aaPredicted RBP9.13□□□□□ -0.95
ACTB-205ENST00000432588 J3QQQ9 107 aa9.12□□□□□ -0.95
ACTB-205ENST00000432588 HERVK_113P61574 105 aa9.12□□□□□ -0.95
ACTB-205ENST00000432588 ASB16-AS1Q495Z4 193 aa9.12□□□□□ -0.95
ACTB-205ENST00000432588 Q6ZRX8 168 aa9.12□□□□□ -0.95
ACTB-205ENST00000432588 ERC2-IT1O76042 136 aa9.11□□□□□ -0.95
ACTB-205ENST00000432588 NMUP48645 174 aa9.11□□□□□ -0.95
ACTB-205ENST00000432588 S100A7L2Q5SY68 101 aa9.11□□□□□ -0.95
ACTB-205ENST00000432588 DPM2O94777 84 aa9.1□□□□□ -0.95
ACTB-205ENST00000432588 JOSD1Q15040 202 aaPredicted RBP9.1□□□□□ -0.95
ACTB-205ENST00000432588 Q9BRP9 147 aa9.1□□□□□ -0.95
ACTB-205ENST00000432588 HSPB8Q9UJY1 196 aa9.1□□□□□ -0.95
ACTB-205ENST00000432588 SLC25A20O43772 301 aa9.09□□□□□ -0.95
ACTB-205ENST00000432588 NDUFC2O95298 119 aa9.09□□□□□ -0.95
ACTB-205ENST00000432588 LGALS3P17931 250 aaKnown RBP9.09□□□□□ -0.95
ACTB-205ENST00000432588 SEC61BP60468 96 aaKnown RBP9.09□□□□□ -0.95
ACTB-205ENST00000432588 Q8N377 158 aa9.09□□□□□ -0.95
ACTB-205ENST00000432588 SERF1AO75920 110 aa9.08□□□□□ -0.96
ACTB-205ENST00000432588 TRGC2P03986 189 aa9.08□□□□□ -0.96
ACTB-205ENST00000432588 TRAV23DV6A0A075B6W5 121 aa9.07□□□□□ -0.96
ACTB-205ENST00000432588 IGLV6-57P01721 117 aa9.07□□□□□ -0.96
ACTB-205ENST00000432588 IGKCP01834 107 aa9.07□□□□□ -0.96
ACTB-205ENST00000432588 FABP4P15090 132 aa9.06□□□□□ -0.96
ACTB-205ENST00000432588 PMCHL2Q9BQD1 86 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms