RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 SFTA2Q6UW10 78 aa8.71□□□□□ -1.02
CSNK1E-208ENST00000431611 C3orf22Q8N5N4 141 aa8.71□□□□□ -1.02
CSNK1E-208ENST00000431611 HIGD2AQ9BW72 106 aa8.71□□□□□ -1.02
CSNK1E-208ENST00000431611 HBDP02042 147 aa8.7□□□□□ -1.02
CSNK1E-208ENST00000431611 LINC00614P0C842 121 aa8.7□□□□□ -1.02
CSNK1E-208ENST00000431611 TMEM170BQ5T4T1 132 aa8.7□□□□□ -1.02
CSNK1E-208ENST00000431611 BAGE3Q86Y29 109 aa8.7□□□□□ -1.02
CSNK1E-208ENST00000431611 URB1-AS1Q96HZ7 61 aa8.7□□□□□ -1.02
CSNK1E-208ENST00000431611 C11orf86A6NJI1 115 aa8.69□□□□□ -1.02
CSNK1E-208ENST00000431611 LINC00158P58513 81 aa8.68□□□□□ -1.02
CSNK1E-208ENST00000431611 PMCHL1Q16048 86 aa8.68□□□□□ -1.02
CSNK1E-208ENST00000431611 C10orf91Q5T1B1 145 aa8.68□□□□□ -1.02
CSNK1E-208ENST00000431611 SPAG11AQ6PDA7 123 aa8.68□□□□□ -1.02
CSNK1E-208ENST00000431611 C18orf32Q8TCD1 76 aa8.68□□□□□ -1.02
CSNK1E-208ENST00000431611 PPDPFQ9H3Y8 114 aa8.68□□□□□ -1.02
CSNK1E-208ENST00000431611 SPRR4Q96PI1 79 aa8.67□□□□□ -1.02
CSNK1E-208ENST00000431611 RPS10P5Q9NQ39 176 aa8.67□□□□□ -1.02
CSNK1E-208ENST00000431611 RHEBQ15382 184 aa8.66□□□□□ -1.02
CSNK1E-208ENST00000431611 TRAPPC1Q9Y5R8 145 aa8.66□□□□□ -1.02
CSNK1E-208ENST00000431611 A0A0U1RRA0 63 aa8.65□□□□□ -1.02
CSNK1E-208ENST00000431611 C4orf48Q5BLP8 95 aa8.65□□□□□ -1.02
CSNK1E-208ENST00000431611 ZNF706Q9Y5V0 76 aaPredicted RBP8.65□□□□□ -1.02
CSNK1E-208ENST00000431611 CHTOPQ9Y3Y2 248 aaKnown RBP8.64□□□□□ -1.03
CSNK1E-208ENST00000431611 FP248Q71RG6 208 aaPredicted RBP8.63□□□□□ -1.03
CSNK1E-208ENST00000431611 ATP6V1G1O75348 118 aa8.62□□□□□ -1.03
CSNK1E-208ENST00000431611 TMEM223A0PJW6 202 aa8.61□□□□□ -1.03
CSNK1E-208ENST00000431611 PRYO14603 147 aa8.61□□□□□ -1.03
CSNK1E-208ENST00000431611 SMIM13P0DJ93 91 aa8.61□□□□□ -1.03
CSNK1E-208ENST00000431611 BOD1L2Q8IYS8 172 aa8.61□□□□□ -1.03
CSNK1E-208ENST00000431611 DAND5Q8N907 189 aa8.61□□□□□ -1.03
CSNK1E-208ENST00000431611 LINC00337Q8N6G1 96 aa8.6□□□□□ -1.03
CSNK1E-208ENST00000431611 Q8NBF4 154 aa8.6□□□□□ -1.03
CSNK1E-208ENST00000431611 APOC3P02656 99 aa8.59□□□□□ -1.03
CSNK1E-208ENST00000431611 SPRR1AP35321 89 aa8.59□□□□□ -1.03
CSNK1E-208ENST00000431611 MEIG1Q5JSS6 88 aa8.59□□□□□ -1.03
CSNK1E-208ENST00000431611 SMCR5Q8TEV8 140 aa8.59□□□□□ -1.03
CSNK1E-208ENST00000431611 TRAV12-1A0A0B4J245 112 aa8.58□□□□□ -1.04
CSNK1E-208ENST00000431611 ETDCA0A1B0GVM5 59 aa8.58□□□□□ -1.04
CSNK1E-208ENST00000431611 NCR3O14931 201 aa8.58□□□□□ -1.04
CSNK1E-208ENST00000431611 NDUFA5Q16718 116 aa8.58□□□□□ -1.04
CSNK1E-208ENST00000431611 MIR7-3HGQ8N6C7 128 aa8.58□□□□□ -1.04
CSNK1E-208ENST00000431611 KCNQ1DNQ9H478 68 aa8.58□□□□□ -1.04
CSNK1E-208ENST00000431611 HERV-K104P63124 156 aa8.57□□□□□ -1.04
CSNK1E-208ENST00000431611 SVBPQ8N300 66 aa8.57□□□□□ -1.04
CSNK1E-208ENST00000431611 IFI27L1Q96BM0 104 aa8.57□□□□□ -1.04
CSNK1E-208ENST00000431611 KRTAP4-16G5E9R7 235 aaPredicted RBP8.56□□□□□ -1.04
CSNK1E-208ENST00000431611 SNAPINO95295 136 aa8.56□□□□□ -1.04
CSNK1E-208ENST00000431611 SPINK1P00995 79 aa8.56□□□□□ -1.04
CSNK1E-208ENST00000431611 KRTAP13-3Q3SY46 172 aa8.56□□□□□ -1.04
CSNK1E-208ENST00000431611 TRBV10-3A0A0K0K1G6 114 aa8.55□□□□□ -1.04
CSNK1E-208ENST00000431611 LINC00587B1AMM8 73 aa8.55□□□□□ -1.04
CSNK1E-208ENST00000431611 CHCHD1Q96BP2 118 aaKnown RBP8.55□□□□□ -1.04
CSNK1E-208ENST00000431611 S100A12P80511 92 aa8.54□□□□□ -1.04
CSNK1E-208ENST00000431611 LINC00483Q53H64 154 aa8.54□□□□□ -1.04
CSNK1E-208ENST00000431611 KRTAP9-6A0A140TA67 174 aa8.53□□□□□ -1.04
CSNK1E-208ENST00000431611 ASB16-AS1Q495Z4 193 aa8.53□□□□□ -1.04
CSNK1E-208ENST00000431611 GAGE2AQ6NT46 116 aa8.53□□□□□ -1.04
CSNK1E-208ENST00000431611 MAP1LC3CQ9BXW4 147 aa8.53□□□□□ -1.04
CSNK1E-208ENST00000431611 NDUFA12Q9UI09 145 aa8.53□□□□□ -1.04
CSNK1E-208ENST00000431611 MYMXA0A1B0GTQ4 84 aa8.52□□□□□ -1.05
CSNK1E-208ENST00000431611 B5MCH6 92 aa8.51□□□□□ -1.05
CSNK1E-208ENST00000431611 IGLV9-49A0A0B4J1Y8 123 aa8.5□□□□□ -1.05
CSNK1E-208ENST00000431611 MOBPQ13875 183 aa8.5□□□□□ -1.05
CSNK1E-208ENST00000431611 HSBP1O75506 76 aa8.49□□□□□ -1.05
CSNK1E-208ENST00000431611 ERC2-IT1O76042 136 aa8.49□□□□□ -1.05
CSNK1E-208ENST00000431611 SEC61BP60468 96 aaKnown RBP8.49□□□□□ -1.05
CSNK1E-208ENST00000431611 SSBP3-AS1Q7Z2R9 100 aa8.49□□□□□ -1.05
CSNK1E-208ENST00000431611 DDTP30046 118 aa8.48□□□□□ -1.05
CSNK1E-208ENST00000431611 LINC01547P58512 204 aaPredicted RBP8.48□□□□□ -1.05
CSNK1E-208ENST00000431611 RPS29P62273 56 aaKnown RBP8.48□□□□□ -1.05
CSNK1E-208ENST00000431611 SLC7A5P1Q8MH63 180 aa8.48□□□□□ -1.05
CSNK1E-208ENST00000431611 FAM19A2Q8N3H0 131 aa8.48□□□□□ -1.05
CSNK1E-208ENST00000431611 LOC107984156A0A0G2JMH3 177 aa8.47□□□□□ -1.05
CSNK1E-208ENST00000431611 TRBV10-2A0A0K0K1G8 114 aa8.47□□□□□ -1.05
CSNK1E-208ENST00000431611 H0Y8G0 127 aa8.47□□□□□ -1.05
CSNK1E-208ENST00000431611 ARL17AQ8IVW1 177 aa8.47□□□□□ -1.05
CSNK1E-208ENST00000431611 Q8N377 158 aa8.47□□□□□ -1.05
CSNK1E-208ENST00000431611 YPEL4Q96NS1 127 aa8.47□□□□□ -1.05
CSNK1E-208ENST00000431611 TSPEAR-AS2P59090 65 aa8.46□□□□□ -1.06
CSNK1E-208ENST00000431611 Q9BRP9 147 aa8.46□□□□□ -1.06
CSNK1E-208ENST00000431611 KRTAP4-1Q9BYQ7 146 aa8.46□□□□□ -1.06
CSNK1E-208ENST00000431611 LEPROTO15243 131 aa8.45□□□□□ -1.06
CSNK1E-208ENST00000431611 SLC25A20O43772 301 aa8.45□□□□□ -1.06
CSNK1E-208ENST00000431611 Q6ZRX8 168 aa8.45□□□□□ -1.06
CSNK1E-208ENST00000431611 MIEN1Q9BRT3 115 aa8.44□□□□□ -1.06
CSNK1E-208ENST00000431611 SPANXB1Q9NS25 103 aaPredicted RBP8.44□□□□□ -1.06
CSNK1E-208ENST00000431611 S100A7L2Q5SY68 101 aa8.43□□□□□ -1.06
CSNK1E-208ENST00000431611 J3QQQ9 107 aa8.42□□□□□ -1.06
CSNK1E-208ENST00000431611 LEPROTL1O95214 131 aa8.42□□□□□ -1.06
CSNK1E-208ENST00000431611 NDUFC2O95298 119 aa8.41□□□□□ -1.06
CSNK1E-208ENST00000431611 IGLV6-57P01721 117 aa8.41□□□□□ -1.06
CSNK1E-208ENST00000431611 PLNP26678 52 aa8.41□□□□□ -1.06
CSNK1E-208ENST00000431611 JOSD1Q15040 202 aaPredicted RBP8.41□□□□□ -1.06
CSNK1E-208ENST00000431611 TRAV23DV6A0A075B6W5 121 aa8.4□□□□□ -1.06
CSNK1E-208ENST00000431611 NMUP48645 174 aa8.4□□□□□ -1.06
CSNK1E-208ENST00000431611 HERVK_113P61574 105 aa8.4□□□□□ -1.06
CSNK1E-208ENST00000431611 XP32Q5T750 250 aa8.4□□□□□ -1.06
CSNK1E-208ENST00000431611 C9orf153Q5TBE3 101 aa8.4□□□□□ -1.06
CSNK1E-208ENST00000431611 DPM2O94777 84 aa8.39□□□□□ -1.07
CSNK1E-208ENST00000431611 LGALS3P17931 250 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms