RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 C6orf223Q8N319 242 aa8□□□□□ -1.13
PTCH1-208ENST00000430669 SBSPONQ8IVN8 264 aa7.99□□□□□ -1.13
PTCH1-208ENST00000430669 SVIPQ8NHG7 77 aa7.99□□□□□ -1.13
PTCH1-208ENST00000430669 LINC00337Q8N6G1 96 aa7.99□□□□□ -1.13
PTCH1-208ENST00000430669 USP24Q9UPU5 2620 aa7.98□□□□□ -1.13
PTCH1-208ENST00000430669 C3orf84H3BNL1 204 aa7.98□□□□□ -1.13
PTCH1-208ENST00000430669 KRTAP1-3Q8IUG1 177 aa7.98□□□□□ -1.13
PTCH1-208ENST00000430669 LRBAP50851 2863 aa7.98□□□□□ -1.13
PTCH1-208ENST00000430669 IGSF10Q6WRI0 2623 aa7.98□□□□□ -1.13
PTCH1-208ENST00000430669 A0A1B0GW54 56 aa7.97□□□□□ -1.13
PTCH1-208ENST00000430669 TEX15Q9BXT5 2789 aa7.97□□□□□ -1.13
PTCH1-208ENST00000430669 IGLV5-52A0A0A0MRZ9 124 aa7.97□□□□□ -1.13
PTCH1-208ENST00000430669 GVQW2A0A096LPI5 108 aaPredicted RBP7.97□□□□□ -1.13
PTCH1-208ENST00000430669 M0R2N4 97 aa7.96□□□□□ -1.13
PTCH1-208ENST00000430669 PRR3P79522 188 aaKnown RBP7.96□□□□□ -1.14
PTCH1-208ENST00000430669 ESRGQ1W209 222 aa7.96□□□□□ -1.14
PTCH1-208ENST00000430669 KRTAP24-1Q3LI83 254 aa7.95□□□□□ -1.14
PTCH1-208ENST00000430669 Q6ZRU5 148 aa7.95□□□□□ -1.14
PTCH1-208ENST00000430669 ATRQ13535 2644 aa7.95□□□□□ -1.14
PTCH1-208ENST00000430669 XGP55808 180 aa7.95□□□□□ -1.14
PTCH1-208ENST00000430669 DNAH10OSP0CZ25 163 aa7.95□□□□□ -1.14
PTCH1-208ENST00000430669 C1orf137Q5JT78 98 aa7.94□□□□□ -1.14
PTCH1-208ENST00000430669 MAP1AP78559 2803 aaPredicted RBP7.94□□□□□ -1.14
PTCH1-208ENST00000430669 COX7CP15954 63 aa7.94□□□□□ -1.14
PTCH1-208ENST00000430669 MYO15AQ9UKN7 3530 aa7.93□□□□□ -1.14
PTCH1-208ENST00000430669 CXCL6P80162 114 aa7.93□□□□□ -1.14
PTCH1-208ENST00000430669 FAM236DA0A1B0GTK5 79 aa7.93□□□□□ -1.14
PTCH1-208ENST00000430669 FAM236CP0DP71 79 aa7.93□□□□□ -1.14
PTCH1-208ENST00000430669 C1orf134Q5TEV5 83 aa7.93□□□□□ -1.14
PTCH1-208ENST00000430669 HECTD1Q9ULT8 2610 aa7.93□□□□□ -1.14
PTCH1-208ENST00000430669 PRR15LQ9BU68 103 aa7.93□□□□□ -1.14
PTCH1-208ENST00000430669 CHD6Q8TD26 2715 aa7.92□□□□□ -1.14
PTCH1-208ENST00000430669 BOD1L1Q8NFC6 3051 aa7.92□□□□□ -1.14
PTCH1-208ENST00000430669 A0A096LNI7 61 aa7.92□□□□□ -1.14
PTCH1-208ENST00000430669 TRAV7A0A075B6U4 112 aa7.91□□□□□ -1.14
PTCH1-208ENST00000430669 C6orf48Q9UBA6 75 aa7.91□□□□□ -1.14
PTCH1-208ENST00000430669 LINC00612Q8N6U2 182 aa7.9□□□□□ -1.14
PTCH1-208ENST00000430669 SERP1Q9Y6X1 66 aa7.9□□□□□ -1.15
PTCH1-208ENST00000430669 C20orf197Q8N268 126 aa7.89□□□□□ -1.15
PTCH1-208ENST00000430669 FLNBO75369 2602 aaKnown RBP7.89□□□□□ -1.15
PTCH1-208ENST00000430669 SCXQ7RTU7 201 aa7.89□□□□□ -1.15
PTCH1-208ENST00000430669 C19orf73Q9NVV2 129 aa7.88□□□□□ -1.15
PTCH1-208ENST00000430669 Q9UF83 564 aa7.88□□□□□ -1.15
PTCH1-208ENST00000430669 IGLV9-49A0A0B4J1Y8 123 aa7.88□□□□□ -1.15
PTCH1-208ENST00000430669 ELOF1P60002 83 aaKnown RBP7.88□□□□□ -1.15
PTCH1-208ENST00000430669 Q9BRP9 147 aa7.88□□□□□ -1.15
PTCH1-208ENST00000430669 MDFIQ99750 246 aa7.87□□□□□ -1.15
PTCH1-208ENST00000430669 SPINK6Q6UWN8 80 aa7.87□□□□□ -1.15
PTCH1-208ENST00000430669 TRBV7-7A0A0K0K1E9 115 aa7.87□□□□□ -1.15
PTCH1-208ENST00000430669 C22orf24Q9Y442 160 aa7.87□□□□□ -1.15
PTCH1-208ENST00000430669 ITPR2Q14571 2701 aa7.87□□□□□ -1.15
PTCH1-208ENST00000430669 GIG44P09565 113 aaPredicted RBP7.87□□□□□ -1.15
PTCH1-208ENST00000430669 DMXL2Q8TDJ6 3036 aa7.87□□□□□ -1.15
PTCH1-208ENST00000430669 MAST4O15021 2626 aa7.87□□□□□ -1.15
PTCH1-208ENST00000430669 V9GYY9 64 aa7.86□□□□□ -1.15
PTCH1-208ENST00000430669 C16orf90A8MZG2 172 aa7.86□□□□□ -1.15
PTCH1-208ENST00000430669 LITAFQ99732 161 aa7.86□□□□□ -1.15
PTCH1-208ENST00000430669 KRTAP1-1Q07627 177 aa7.86□□□□□ -1.15
PTCH1-208ENST00000430669 FREM2Q5SZK8 3169 aa7.86□□□□□ -1.15
PTCH1-208ENST00000430669 LOC110117498A0A087WWA1 95 aa7.85□□□□□ -1.15
PTCH1-208ENST00000430669 DMXL1Q9Y485 3027 aa7.85□□□□□ -1.15
PTCH1-208ENST00000430669 IGLV6-57P01721 117 aa7.85□□□□□ -1.15
PTCH1-208ENST00000430669 PRO0461Q9UI25 63 aa7.85□□□□□ -1.15
PTCH1-208ENST00000430669 SPTSSBQ8NFR3 76 aa7.85□□□□□ -1.15
PTCH1-208ENST00000430669 BRK1Q8WUW1 75 aa7.85□□□□□ -1.15
PTCH1-208ENST00000430669 UTP20O75691 2785 aaKnown RBP7.84□□□□□ -1.15
PTCH1-208ENST00000430669 HRCT1Q6UXD1 115 aa7.84□□□□□ -1.15
PTCH1-208ENST00000430669 FLG2Q5D862 2391 aaPredicted RBP7.84□□□□□ -1.15
PTCH1-208ENST00000430669 LINC00588Q9Y4M8 146 aa7.84□□□□□ -1.15
PTCH1-208ENST00000430669 SOSTDC1Q6X4U4 206 aa7.84□□□□□ -1.15
PTCH1-208ENST00000430669 PRR34Q9NV39 138 aa7.84□□□□□ -1.15
PTCH1-208ENST00000430669 KRTAP10-3P60369 221 aa7.82□□□□□ -1.16
PTCH1-208ENST00000430669 KRTAP10-11P60412 298 aa7.81□□□□□ -1.16
PTCH1-208ENST00000430669 Q6ZRX8 168 aa7.81□□□□□ -1.16
PTCH1-208ENST00000430669 KALRNO60229 2985 aa7.81□□□□□ -1.16
PTCH1-208ENST00000430669 NBDYA0A0U1RRE5 68 aa7.81□□□□□ -1.16
PTCH1-208ENST00000430669 BCE1O60756 84 aa7.81□□□□□ -1.16
PTCH1-208ENST00000430669 Q6ZVQ6 151 aa7.81□□□□□ -1.16
PTCH1-208ENST00000430669 CDIP1Q9H305 208 aa7.8□□□□□ -1.16
PTCH1-208ENST00000430669 LINC01547P58512 204 aaPredicted RBP7.8□□□□□ -1.16
PTCH1-208ENST00000430669 SPEGQ15772 3267 aa7.8□□□□□ -1.16
PTCH1-208ENST00000430669 TEP1Q99973 2627 aaKnown RBP7.8□□□□□ -1.16
PTCH1-208ENST00000430669 LINC00167Q96N53 147 aa7.79□□□□□ -1.16
PTCH1-208ENST00000430669 LIMD2Q9BT23 127 aa7.79□□□□□ -1.16
PTCH1-208ENST00000430669 LINC00846Q9NV44 126 aa7.79□□□□□ -1.16
PTCH1-208ENST00000430669 SMCPP49901 116 aaPredicted RBP7.78□□□□□ -1.16
PTCH1-208ENST00000430669 TACC2O95359 2948 aa7.78□□□□□ -1.16
PTCH1-208ENST00000430669 ADGRG4Q8IZF6 3080 aa7.78□□□□□ -1.16
PTCH1-208ENST00000430669 CCDC179H3BU77 68 aa7.78□□□□□ -1.16
PTCH1-208ENST00000430669 CIRBP-AS1Q8TBR5 109 aa7.78□□□□□ -1.16
PTCH1-208ENST00000430669 Q8N3U1 123 aa7.78□□□□□ -1.16
PTCH1-208ENST00000430669 TM2D3Q9BRN9 247 aa7.77□□□□□ -1.17
PTCH1-208ENST00000430669 WIPF1O43516 503 aa7.77□□□□□ -1.17
PTCH1-208ENST00000430669 NBEAQ8NFP9 2946 aa7.77□□□□□ -1.17
PTCH1-208ENST00000430669 FLNCQ14315 2725 aa7.77□□□□□ -1.17
PTCH1-208ENST00000430669 FAM218AQ96MZ4 157 aa7.77□□□□□ -1.17
PTCH1-208ENST00000430669 PRLHP81277 87 aa7.77□□□□□ -1.17
PTCH1-208ENST00000430669 WDFY3Q8IZQ1 3526 aa7.77□□□□□ -1.17
PTCH1-208ENST00000430669 GCN1Q92616 2671 aaKnown RBP7.76□□□□□ -1.17
PTCH1-208ENST00000430669 KIAA0087Q14695 138 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms