RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 LOC110117498A0A087WWA1 95 aa8.81□□□□□ -1
LDB3-205ENST00000429277 MOBPQ13875 183 aa8.81□□□□□ -1
LDB3-205ENST00000429277 Q6ZRX8 168 aa8.8□□□□□ -1
LDB3-205ENST00000429277 ZFYVE26Q68DK2 2539 aa8.8□□□□□ -1
LDB3-205ENST00000429277 CDIP1Q9H305 208 aa8.8□□□□□ -1
LDB3-205ENST00000429277 LRRK2Q5S007 2527 aa8.8□□□□□ -1
LDB3-205ENST00000429277 A0A1B0GU69 56 aa8.79□□□□□ -1
LDB3-205ENST00000429277 Q6ZRP5 223 aa8.79□□□□□ -1
LDB3-205ENST00000429277 C16orf90A8MZG2 172 aa8.78□□□□□ -1
LDB3-205ENST00000429277 KLK9Q2XQG4 91 aa8.78□□□□□ -1
LDB3-205ENST00000429277 SPACA4Q8TDM5 124 aa8.78□□□□□ -1
LDB3-205ENST00000429277 USP9XQ93008 2570 aaPredicted RBP8.78□□□□□ -1
LDB3-205ENST00000429277 GVQW2A0A096LPI5 108 aaPredicted RBP8.78□□□□□ -1
LDB3-205ENST00000429277 FAM229AH3BQW9 127 aa8.78□□□□□ -1
LDB3-205ENST00000429277 NBDYA0A0U1RRE5 68 aa8.76□□□□□ -1.01
LDB3-205ENST00000429277 FN1P02751 2386 aaKnown RBP8.76□□□□□ -1.01
LDB3-205ENST00000429277 Q6ZQT0 140 aa8.75□□□□□ -1.01
LDB3-205ENST00000429277 LINC00476Q8WZB0 136 aa8.75□□□□□ -1.01
LDB3-205ENST00000429277 RTL8CO15255 209 aa8.74□□□□□ -1.01
LDB3-205ENST00000429277 TRAV22A0A0B4J277 110 aa8.73□□□□□ -1.01
LDB3-205ENST00000429277 LINC00313P59037 77 aa8.73□□□□□ -1.01
LDB3-205ENST00000429277 Q8NAQ8 132 aa8.73□□□□□ -1.01
LDB3-205ENST00000429277 C8orf87E5RJ46 101 aa8.72□□□□□ -1.01
LDB3-205ENST00000429277 RPS28P62857 69 aaKnown RBP8.72□□□□□ -1.01
LDB3-205ENST00000429277 EPM2AB3EWF7 344 aa8.71□□□□□ -1.01
LDB3-205ENST00000429277 TET2Q6N021 2002 aaPredicted RBP8.71□□□□□ -1.01
LDB3-205ENST00000429277 TYMSOSQ8TAI1 123 aa8.71□□□□□ -1.02
LDB3-205ENST00000429277 TLN2Q9Y4G6 2542 aa8.71□□□□□ -1.02
LDB3-205ENST00000429277 TRBV7-4A0A0J9YYF1 115 aa8.71□□□□□ -1.02
LDB3-205ENST00000429277 PRO0628Q9UI54 55 aa8.71□□□□□ -1.02
LDB3-205ENST00000429277 KRTAP24-1Q3LI83 254 aa8.7□□□□□ -1.02
LDB3-205ENST00000429277 PHF5AQ7RTV0 110 aaKnown RBP8.7□□□□□ -1.02
LDB3-205ENST00000429277 FAM218AQ96MZ4 157 aa8.7□□□□□ -1.02
LDB3-205ENST00000429277 DNAH10OSP0CZ25 163 aa8.7□□□□□ -1.02
LDB3-205ENST00000429277 LOC101927531A0A1B0GV80 90 aa8.69□□□□□ -1.02
LDB3-205ENST00000429277 SMCPP49901 116 aaPredicted RBP8.69□□□□□ -1.02
LDB3-205ENST00000429277 PRO0461Q9UI25 63 aa8.69□□□□□ -1.02
LDB3-205ENST00000429277 LINC00588Q9Y4M8 146 aa8.69□□□□□ -1.02
LDB3-205ENST00000429277 COL4A2P08572 1712 aa8.67□□□□□ -1.02
LDB3-205ENST00000429277 SPAG11AQ6PDA7 123 aa8.67□□□□□ -1.02
LDB3-205ENST00000429277 WWC2-AS2Q96NR7 200 aa8.67□□□□□ -1.02
LDB3-205ENST00000429277 PLA2G1BP04054 148 aaKnown RBP8.65□□□□□ -1.02
LDB3-205ENST00000429277 IGLV6-57P01721 117 aa8.65□□□□□ -1.02
LDB3-205ENST00000429277 MUC4Q99102 2169 aa8.65□□□□□ -1.03
LDB3-205ENST00000429277 Q9UF83 564 aa8.64□□□□□ -1.03
LDB3-205ENST00000429277 USP9YO00507 2555 aaPredicted RBP8.64□□□□□ -1.03
LDB3-205ENST00000429277 VPREB1P12018 145 aa8.64□□□□□ -1.03
LDB3-205ENST00000429277 ERC2-IT1O76042 136 aa8.64□□□□□ -1.03
LDB3-205ENST00000429277 A8MWP4 228 aa8.63□□□□□ -1.03
LDB3-205ENST00000429277 ATP11AUNQ6ZP68 121 aa8.63□□□□□ -1.03
LDB3-205ENST00000429277 PTPRBP23467 1997 aa8.62□□□□□ -1.03
LDB3-205ENST00000429277 PKD1L2Q7Z442 2459 aa8.62□□□□□ -1.03
LDB3-205ENST00000429277 ANKRD11Q6UB99 2663 aaPredicted RBP8.61□□□□□ -1.03
LDB3-205ENST00000429277 ST20-AS1Q8NBB2 130 aa8.61□□□□□ -1.03
LDB3-205ENST00000429277 KCNQ1DNQ9H478 68 aa8.6□□□□□ -1.03
LDB3-205ENST00000429277 LITAFQ99732 161 aa8.59□□□□□ -1.03
LDB3-205ENST00000429277 MRPL34Q9BQ48 92 aaKnown RBP8.59□□□□□ -1.03
LDB3-205ENST00000429277 IGLV1-50A0A075B6I6 118 aa8.58□□□□□ -1.04
LDB3-205ENST00000429277 Q96NJ1 140 aa8.58□□□□□ -1.04
LDB3-205ENST00000429277 SETD2Q9BYW2 2564 aaPredicted RBP8.57□□□□□ -1.04
LDB3-205ENST00000429277 COL27A1Q8IZC6 1860 aaPredicted RBP8.57□□□□□ -1.04
LDB3-205ENST00000429277 CHD8Q9HCK8 2581 aa8.57□□□□□ -1.04
LDB3-205ENST00000429277 RPL37AP61513 92 aaKnown RBP8.57□□□□□ -1.04
LDB3-205ENST00000429277 CHTF8P0CG12 524 aa8.56□□□□□ -1.04
LDB3-205ENST00000429277 SSBP3-AS1Q7Z2R9 100 aa8.56□□□□□ -1.04
LDB3-205ENST00000429277 TM2D3Q9BRN9 247 aa8.56□□□□□ -1.04
LDB3-205ENST00000429277 CEP295Q9C0D2 2601 aa8.56□□□□□ -1.04
LDB3-205ENST00000429277 CSNK1G2-AS1Q8NCQ2 148 aa8.54□□□□□ -1.04
LDB3-205ENST00000429277 LINC00528Q8N1L1 170 aa8.54□□□□□ -1.04
LDB3-205ENST00000429277 CYP4F30PQ9H0H9 118 aa8.54□□□□□ -1.04
LDB3-205ENST00000429277 PRR34Q9NV39 138 aa8.54□□□□□ -1.04
LDB3-205ENST00000429277 ZNF462Q96JM2 2506 aa8.53□□□□□ -1.04
LDB3-205ENST00000429277 PLA2G2DQ9UNK4 145 aa8.51□□□□□ -1.05
LDB3-205ENST00000429277 F8P00451 2351 aa8.51□□□□□ -1.05
LDB3-205ENST00000429277 C19orf73Q9NVV2 129 aa8.5□□□□□ -1.05
LDB3-205ENST00000429277 TLX1NBP0CAT3 122 aa8.5□□□□□ -1.05
LDB3-205ENST00000429277 K7EQZ3 153 aa8.5□□□□□ -1.05
LDB3-205ENST00000429277 SERTAD4-AS1Q5TG53 156 aa8.5□□□□□ -1.05
LDB3-205ENST00000429277 J3QL48 77 aa8.49□□□□□ -1.05
LDB3-205ENST00000429277 ZNF861PO60384 105 aa8.49□□□□□ -1.05
LDB3-205ENST00000429277 PRR15Q8IV56 129 aa8.48□□□□□ -1.05
LDB3-205ENST00000429277 MTORP42345 2549 aa8.48□□□□□ -1.05
LDB3-205ENST00000429277 UQCR11O14957 56 aa8.48□□□□□ -1.05
LDB3-205ENST00000429277 LINC00612Q8N6U2 182 aa8.47□□□□□ -1.05
LDB3-205ENST00000429277 C8orf17Q9NRJ1 99 aa8.47□□□□□ -1.05
LDB3-205ENST00000429277 FAM168BA1KXE4 195 aa8.47□□□□□ -1.05
LDB3-205ENST00000429277 LINC01600Q96MT4 127 aa8.47□□□□□ -1.05
LDB3-205ENST00000429277 IGFL1Q6UW32 110 aa8.47□□□□□ -1.05
LDB3-205ENST00000429277 COA5Q86WW8 74 aa8.47□□□□□ -1.05
LDB3-205ENST00000429277 LINC00304Q8N9R0 145 aa8.47□□□□□ -1.05
LDB3-205ENST00000429277 C4orf26Q17RF5 130 aa8.46□□□□□ -1.06
LDB3-205ENST00000429277 A0A1B0GVX0 72 aa8.45□□□□□ -1.06
LDB3-205ENST00000429277 C15orf56Q8N910 161 aa8.44□□□□□ -1.06
LDB3-205ENST00000429277 K7EIL1 84 aa8.44□□□□□ -1.06
LDB3-205ENST00000429277 C9orf163Q8N9P6 203 aa8.44□□□□□ -1.06
LDB3-205ENST00000429277 KLKP1Q107X0 134 aa8.42□□□□□ -1.06
LDB3-205ENST00000429277 ANKRD17O75179 2603 aaKnown RBP8.41□□□□□ -1.06
LDB3-205ENST00000429277 A0A087WTM6 91 aa8.41□□□□□ -1.06
LDB3-205ENST00000429277 COX6B2Q6YFQ2 88 aa8.41□□□□□ -1.06
LDB3-205ENST00000429277 IGLV8-61A0A075B6I0 122 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms