RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 TMEM238C9JI98 176 aa15.97■□□□□ 0.15
LMO1-202ENST00000428101 RPL24P83731 157 aaKnown RBP15.97■□□□□ 0.15
LMO1-202ENST00000428101 SFTA2Q6UW10 78 aa15.97■□□□□ 0.15
LMO1-202ENST00000428101 TMEM126AQ9H061 195 aa15.96■□□□□ 0.15
LMO1-202ENST00000428101 PRLHP81277 87 aa15.95■□□□□ 0.14
LMO1-202ENST00000428101 TMEM223A0PJW6 202 aa15.93■□□□□ 0.14
LMO1-202ENST00000428101 M0R378 163 aa15.93■□□□□ 0.14
LMO1-202ENST00000428101 FAM229BQ4G0N7 80 aa15.93■□□□□ 0.14
LMO1-202ENST00000428101 FAM19A1Q7Z5A9 133 aa15.93■□□□□ 0.14
LMO1-202ENST00000428101 TRAV12-1A0A0B4J245 112 aa15.92■□□□□ 0.14
LMO1-202ENST00000428101 IFI27L1Q96BM0 104 aa15.92■□□□□ 0.14
LMO1-202ENST00000428101 LINC00158P58513 81 aa15.9■□□□□ 0.14
LMO1-202ENST00000428101 HSBP1O75506 76 aa15.88■□□□□ 0.13
LMO1-202ENST00000428101 A0A0U1RRA0 63 aa15.86■□□□□ 0.13
LMO1-202ENST00000428101 PLEKHB2Q96CS7 222 aa15.85■□□□□ 0.13
LMO1-202ENST00000428101 MUC2Q02817 5179 aa15.83■□□□□ 0.13
LMO1-202ENST00000428101 FAM19A2Q8N3H0 131 aa15.83■□□□□ 0.12
LMO1-202ENST00000428101 LINC00304Q8N9R0 145 aa15.83■□□□□ 0.12
LMO1-202ENST00000428101 IGKV2D-26A0A0A0MRZ7 120 aa15.82■□□□□ 0.12
LMO1-202ENST00000428101 SERF1AO75920 110 aa15.82■□□□□ 0.12
LMO1-202ENST00000428101 SMIM13P0DJ93 91 aa15.82■□□□□ 0.12
LMO1-202ENST00000428101 LINC00310P59036 64 aa15.8■□□□□ 0.12
LMO1-202ENST00000428101 RETNLBQ9BQ08 111 aa15.77■□□□□ 0.12
LMO1-202ENST00000428101 HIGD2AQ9BW72 106 aa15.77■□□□□ 0.12
LMO1-202ENST00000428101 MEIG1Q5JSS6 88 aa15.76■□□□□ 0.11
LMO1-202ENST00000428101 BOD1L2Q8IYS8 172 aa15.76■□□□□ 0.11
LMO1-202ENST00000428101 MIR7-3HGQ8N6C7 128 aa15.76■□□□□ 0.11
LMO1-202ENST00000428101 ATP6V1G1O75348 118 aa15.75■□□□□ 0.11
LMO1-202ENST00000428101 LEPROTL1O95214 131 aa15.75■□□□□ 0.11
LMO1-202ENST00000428101 HERV-K104P63124 156 aa15.75■□□□□ 0.11
LMO1-202ENST00000428101 C3orf22Q8N5N4 141 aa15.75■□□□□ 0.11
LMO1-202ENST00000428101 NDUFA12Q9UI09 145 aa15.74■□□□□ 0.11
LMO1-202ENST00000428101 H0Y8G0 127 aa15.72■□□□□ 0.11
LMO1-202ENST00000428101 NCR3O14931 201 aa15.72■□□□□ 0.11
LMO1-202ENST00000428101 SPRR4Q96PI1 79 aa15.72■□□□□ 0.11
LMO1-202ENST00000428101 PRYO14603 147 aa15.71■□□□□ 0.11
LMO1-202ENST00000428101 HIST1H2BKO60814 126 aa15.71■□□□□ 0.11
LMO1-202ENST00000428101 HIST1H2BJP06899 126 aa15.71■□□□□ 0.11
LMO1-202ENST00000428101 HIST1H2BOP23527 126 aa15.71■□□□□ 0.11
LMO1-202ENST00000428101 HIST1H2BBP33778 126 aa15.71■□□□□ 0.11
LMO1-202ENST00000428101 HIST1H2BDP58876 126 aa15.71■□□□□ 0.11
LMO1-202ENST00000428101 HIST1H2BCP62807 126 aa15.71■□□□□ 0.11
LMO1-202ENST00000428101 HIST2H2BEQ16778 126 aa15.71■□□□□ 0.11
LMO1-202ENST00000428101 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.71■□□□□ 0.11
LMO1-202ENST00000428101 HIST1H2BHQ93079 126 aa15.71■□□□□ 0.11
LMO1-202ENST00000428101 HIST1H2BNQ99877 126 aa15.71■□□□□ 0.11
LMO1-202ENST00000428101 HIST1H2BMQ99879 126 aa15.71■□□□□ 0.11
LMO1-202ENST00000428101 SPRR1AP35321 89 aa15.7■□□□□ 0.1
LMO1-202ENST00000428101 CTAG1AP78358 180 aa15.7■□□□□ 0.1
LMO1-202ENST00000428101 KCNQ1DNQ9H478 68 aa15.7■□□□□ 0.1
LMO1-202ENST00000428101 HSPB8Q9UJY1 196 aa15.7■□□□□ 0.1
LMO1-202ENST00000428101 MYMXA0A1B0GTQ4 84 aa15.69■□□□□ 0.1
LMO1-202ENST00000428101 LINC00587B1AMM8 73 aa15.69■□□□□ 0.1
LMO1-202ENST00000428101 S100A1P23297 94 aa15.69■□□□□ 0.1
LMO1-202ENST00000428101 TSPEAR-AS2P59090 65 aa15.69■□□□□ 0.1
LMO1-202ENST00000428101 KRTAP4-16G5E9R7 235 aaPredicted RBP15.67■□□□□ 0.1
LMO1-202ENST00000428101 FABP4P15090 132 aa15.67■□□□□ 0.1
LMO1-202ENST00000428101 LINC00337Q8N6G1 96 aa15.67■□□□□ 0.1
LMO1-202ENST00000428101 LEPROTO15243 131 aa15.65■□□□□ 0.1
LMO1-202ENST00000428101 TRBV10-3A0A0K0K1G6 114 aa15.64■□□□□ 0.09
LMO1-202ENST00000428101 MAP1LC3CQ9BXW4 147 aa15.64■□□□□ 0.09
LMO1-202ENST00000428101 ZNF706Q9Y5V0 76 aaPredicted RBP15.63■□□□□ 0.09
LMO1-202ENST00000428101 LOC107984156A0A0G2JMH3 177 aa15.62■□□□□ 0.09
LMO1-202ENST00000428101 PLNP26678 52 aa15.62■□□□□ 0.09
LMO1-202ENST00000428101 ARL17AQ8IVW1 177 aa15.62■□□□□ 0.09
LMO1-202ENST00000428101 DAND5Q8N907 189 aa15.62■□□□□ 0.09
LMO1-202ENST00000428101 SMCR5Q8TEV8 140 aa15.62■□□□□ 0.09
LMO1-202ENST00000428101 IGLV7-46A0A075B6I9 117 aa15.61■□□□□ 0.09
LMO1-202ENST00000428101 TPRXLQ17RH7 258 aa15.61■□□□□ 0.09
LMO1-202ENST00000428101 ETDCA0A1B0GVM5 59 aa15.6■□□□□ 0.09
LMO1-202ENST00000428101 J3QQQ9 107 aa15.59■□□□□ 0.09
LMO1-202ENST00000428101 SPAG11AQ6PDA7 123 aa15.59■□□□□ 0.09
LMO1-202ENST00000428101 PMCHL2Q9BQD1 86 aa15.59■□□□□ 0.09
LMO1-202ENST00000428101 DPM2O94777 84 aa15.57■□□□□ 0.08
LMO1-202ENST00000428101 PPDPFQ9H3Y8 114 aa15.56■□□□□ 0.08
LMO1-202ENST00000428101 B5MCH6 92 aa15.55■□□□□ 0.08
LMO1-202ENST00000428101 CDIP1Q9H305 208 aa15.55■□□□□ 0.08
LMO1-202ENST00000428101 TRBV10-2A0A0K0K1G8 114 aa15.54■□□□□ 0.08
LMO1-202ENST00000428101 IGKCP01834 107 aa15.54■□□□□ 0.08
LMO1-202ENST00000428101 HERVK_113P61574 105 aa15.54■□□□□ 0.08
LMO1-202ENST00000428101 COA6Q5JTJ3 125 aaKnown RBP15.54■□□□□ 0.08
LMO1-202ENST00000428101 MUC17Q685J3 4493 aa15.53■□□□□ 0.08
LMO1-202ENST00000428101 DDTP30046 118 aa15.53■□□□□ 0.08
LMO1-202ENST00000428101 NMUP48645 174 aa15.53■□□□□ 0.08
LMO1-202ENST00000428101 LINC00483Q53H64 154 aa15.53■□□□□ 0.08
LMO1-202ENST00000428101 Q8NBF4 154 aa15.53■□□□□ 0.08
LMO1-202ENST00000428101 A0A0U1RQV1 116 aa15.52■□□□□ 0.08
LMO1-202ENST00000428101 ERC2-IT1O76042 136 aa15.51■□□□□ 0.07
LMO1-202ENST00000428101 LGALS3P17931 250 aaKnown RBP15.51■□□□□ 0.07
LMO1-202ENST00000428101 S100A12P80511 92 aa15.51■□□□□ 0.07
LMO1-202ENST00000428101 C4orf48Q5BLP8 95 aa15.51■□□□□ 0.07
LMO1-202ENST00000428101 SYS1-DBNDD2H3BUS1 97 aa15.49■□□□□ 0.07
LMO1-202ENST00000428101 SPANXB1Q9NS25 103 aaPredicted RBP15.49■□□□□ 0.07
LMO1-202ENST00000428101 GAGE2AQ6NT46 116 aa15.48■□□□□ 0.07
LMO1-202ENST00000428101 Q9BRP9 147 aa15.48■□□□□ 0.07
LMO1-202ENST00000428101 MIEN1Q9BRT3 115 aa15.47■□□□□ 0.07
LMO1-202ENST00000428101 FAT4Q6V0I7 4981 aa15.46■□□□□ 0.07
LMO1-202ENST00000428101 NDUFC2O95298 119 aa15.46■□□□□ 0.07
LMO1-202ENST00000428101 IGLV6-57P01721 117 aa15.46■□□□□ 0.07
LMO1-202ENST00000428101 EIF4EBP3O60516 100 aaPredicted RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms