RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 RPL24P83731 157 aaKnown RBP10.87□□□□□ -0.67
PSPC1-202ENST00000427943 CRYGAP11844 174 aa10.86□□□□□ -0.67
PSPC1-202ENST00000427943 LINC00158P58513 81 aa10.86□□□□□ -0.67
PSPC1-202ENST00000427943 PRR4Q16378 134 aa10.86□□□□□ -0.67
PSPC1-202ENST00000427943 FAM19A2Q8N3H0 131 aa10.86□□□□□ -0.67
PSPC1-202ENST00000427943 TMEM126AQ9H061 195 aa10.86□□□□□ -0.67
PSPC1-202ENST00000427943 HSBP1O75506 76 aa10.85□□□□□ -0.67
PSPC1-202ENST00000427943 TSPAN13O95857 204 aa10.85□□□□□ -0.67
PSPC1-202ENST00000427943 FAM19A1Q7Z5A9 133 aa10.85□□□□□ -0.67
PSPC1-202ENST00000427943 TYMSOSQ8TAI1 123 aa10.85□□□□□ -0.67
PSPC1-202ENST00000427943 H0Y8G0 127 aa10.84□□□□□ -0.67
PSPC1-202ENST00000427943 M0R378 163 aa10.83□□□□□ -0.68
PSPC1-202ENST00000427943 TRGC2P03986 189 aa10.82□□□□□ -0.68
PSPC1-202ENST00000427943 KRTAP13-2Q52LG2 175 aa10.82□□□□□ -0.68
PSPC1-202ENST00000427943 SMIM13P0DJ93 91 aa10.81□□□□□ -0.68
PSPC1-202ENST00000427943 LINC00310P59036 64 aa10.8□□□□□ -0.68
PSPC1-202ENST00000427943 MEIG1Q5JSS6 88 aa10.8□□□□□ -0.68
PSPC1-202ENST00000427943 ATP6V1G1O75348 118 aa10.78□□□□□ -0.68
PSPC1-202ENST00000427943 SERF1AO75920 110 aa10.78□□□□□ -0.68
PSPC1-202ENST00000427943 FAM229BQ4G0N7 80 aa10.78□□□□□ -0.68
PSPC1-202ENST00000427943 MIR7-3HGQ8N6C7 128 aa10.77□□□□□ -0.69
PSPC1-202ENST00000427943 NCR3O14931 201 aa10.76□□□□□ -0.69
PSPC1-202ENST00000427943 LEPROTL1O95214 131 aa10.76□□□□□ -0.69
PSPC1-202ENST00000427943 HERV-K104P63124 156 aa10.76□□□□□ -0.69
PSPC1-202ENST00000427943 BOD1L2Q8IYS8 172 aa10.76□□□□□ -0.69
PSPC1-202ENST00000427943 SLC7A5P1Q8MH63 180 aa10.76□□□□□ -0.69
PSPC1-202ENST00000427943 NDUFA12Q9UI09 145 aa10.76□□□□□ -0.69
PSPC1-202ENST00000427943 TSPEAR-AS2P59090 65 aa10.75□□□□□ -0.69
PSPC1-202ENST00000427943 HIGD2AQ9BW72 106 aa10.75□□□□□ -0.69
PSPC1-202ENST00000427943 IGKV2D-26A0A0A0MRZ7 120 aa10.73□□□□□ -0.69
PSPC1-202ENST00000427943 LINC00304Q8N9R0 145 aa10.73□□□□□ -0.69
PSPC1-202ENST00000427943 PLEKHB2Q96CS7 222 aa10.73□□□□□ -0.69
PSPC1-202ENST00000427943 MYMXA0A1B0GTQ4 84 aa10.72□□□□□ -0.69
PSPC1-202ENST00000427943 FABP4P15090 132 aa10.72□□□□□ -0.69
PSPC1-202ENST00000427943 PMCHL2Q9BQD1 86 aa10.72□□□□□ -0.69
PSPC1-202ENST00000427943 PRYO14603 147 aa10.71□□□□□ -0.69
PSPC1-202ENST00000427943 LEPROTO15243 131 aa10.7□□□□□ -0.7
PSPC1-202ENST00000427943 PLNP26678 52 aa10.7□□□□□ -0.7
PSPC1-202ENST00000427943 C3orf22Q8N5N4 141 aa10.7□□□□□ -0.7
PSPC1-202ENST00000427943 DAND5Q8N907 189 aa10.7□□□□□ -0.7
PSPC1-202ENST00000427943 RETNLBQ9BQ08 111 aa10.7□□□□□ -0.7
PSPC1-202ENST00000427943 HSPB8Q9UJY1 196 aa10.7□□□□□ -0.7
PSPC1-202ENST00000427943 COLCA2A8K830 154 aa10.69□□□□□ -0.7
PSPC1-202ENST00000427943 LINC00587B1AMM8 73 aa10.69□□□□□ -0.7
PSPC1-202ENST00000427943 MAP1LC3CQ9BXW4 147 aa10.69□□□□□ -0.7
PSPC1-202ENST00000427943 DPM2O94777 84 aa10.68□□□□□ -0.7
PSPC1-202ENST00000427943 TRBV10-3A0A0K0K1G6 114 aa10.67□□□□□ -0.7
PSPC1-202ENST00000427943 SPRR4Q96PI1 79 aa10.67□□□□□ -0.7
PSPC1-202ENST00000427943 J3QQQ9 107 aa10.66□□□□□ -0.7
PSPC1-202ENST00000427943 HERVK_113P61574 105 aa10.66□□□□□ -0.7
PSPC1-202ENST00000427943 KCNQ1DNQ9H478 68 aa10.66□□□□□ -0.7
PSPC1-202ENST00000427943 IGKCP01834 107 aa10.65□□□□□ -0.7
PSPC1-202ENST00000427943 SPRR1AP35321 89 aa10.65□□□□□ -0.7
PSPC1-202ENST00000427943 LINC00337Q8N6G1 96 aa10.65□□□□□ -0.7
PSPC1-202ENST00000427943 ETDCA0A1B0GVM5 59 aa10.64□□□□□ -0.71
PSPC1-202ENST00000427943 LGALS3P17931 250 aaKnown RBP10.64□□□□□ -0.71
PSPC1-202ENST00000427943 KRTAP4-16G5E9R7 235 aaPredicted RBP10.63□□□□□ -0.71
PSPC1-202ENST00000427943 ZNF706Q9Y5V0 76 aaPredicted RBP10.63□□□□□ -0.71
PSPC1-202ENST00000427943 SMCR5Q8TEV8 140 aa10.62□□□□□ -0.71
PSPC1-202ENST00000427943 S100A1P23297 94 aa10.61□□□□□ -0.71
PSPC1-202ENST00000427943 NMUP48645 174 aa10.61□□□□□ -0.71
PSPC1-202ENST00000427943 PPDPFQ9H3Y8 114 aa10.61□□□□□ -0.71
PSPC1-202ENST00000427943 LOC107984156A0A0G2JMH3 177 aa10.6□□□□□ -0.71
PSPC1-202ENST00000427943 DDTP30046 118 aa10.6□□□□□ -0.71
PSPC1-202ENST00000427943 ARL17AQ8IVW1 177 aa10.6□□□□□ -0.71
PSPC1-202ENST00000427943 MIEN1Q9BRT3 115 aa10.6□□□□□ -0.71
PSPC1-202ENST00000427943 S100A12P80511 92 aa10.59□□□□□ -0.71
PSPC1-202ENST00000427943 NPC2P61916 151 aa10.58□□□□□ -0.72
PSPC1-202ENST00000427943 SPANXB1Q9NS25 103 aaPredicted RBP10.58□□□□□ -0.72
PSPC1-202ENST00000427943 TRBV10-2A0A0K0K1G8 114 aa10.57□□□□□ -0.72
PSPC1-202ENST00000427943 B5MCH6 92 aa10.57□□□□□ -0.72
PSPC1-202ENST00000427943 E9PLD3 99 aa10.56□□□□□ -0.72
PSPC1-202ENST00000427943 HIST1H2BKO60814 126 aa10.56□□□□□ -0.72
PSPC1-202ENST00000427943 HIST1H2BJP06899 126 aa10.56□□□□□ -0.72
PSPC1-202ENST00000427943 HIST1H2BOP23527 126 aa10.56□□□□□ -0.72
PSPC1-202ENST00000427943 HIST1H2BBP33778 126 aa10.56□□□□□ -0.72
PSPC1-202ENST00000427943 HIST1H2BDP58876 126 aa10.56□□□□□ -0.72
PSPC1-202ENST00000427943 HIST1H2BCP62807 126 aa10.56□□□□□ -0.72
PSPC1-202ENST00000427943 HIST2H2BEQ16778 126 aa10.56□□□□□ -0.72
PSPC1-202ENST00000427943 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.56□□□□□ -0.72
PSPC1-202ENST00000427943 SOSTDC1Q6X4U4 206 aa10.56□□□□□ -0.72
PSPC1-202ENST00000427943 HIST1H2BHQ93079 126 aa10.56□□□□□ -0.72
PSPC1-202ENST00000427943 HIST1H2BNQ99877 126 aa10.56□□□□□ -0.72
PSPC1-202ENST00000427943 HIST1H2BMQ99879 126 aa10.56□□□□□ -0.72
PSPC1-202ENST00000427943 A0A0J9YXY3 114 aa10.55□□□□□ -0.72
PSPC1-202ENST00000427943 EIF4EBP3O60516 100 aaPredicted RBP10.55□□□□□ -0.72
PSPC1-202ENST00000427943 ERC2-IT1O76042 136 aa10.55□□□□□ -0.72
PSPC1-202ENST00000427943 CTAG1AP78358 180 aa10.55□□□□□ -0.72
PSPC1-202ENST00000427943 Q8NBF4 154 aa10.55□□□□□ -0.72
PSPC1-202ENST00000427943 IGLV7-46A0A075B6I9 117 aa10.54□□□□□ -0.72
PSPC1-202ENST00000427943 SYS1-DBNDD2H3BUS1 97 aa10.54□□□□□ -0.72
PSPC1-202ENST00000427943 NDUFC2O95298 119 aa10.54□□□□□ -0.72
PSPC1-202ENST00000427943 S100A7L2Q5SY68 101 aa10.54□□□□□ -0.72
PSPC1-202ENST00000427943 ADAMTSL4-AS1Q5T5F5 129 aa10.54□□□□□ -0.72
PSPC1-202ENST00000427943 GAGE2AQ6NT46 116 aa10.54□□□□□ -0.72
PSPC1-202ENST00000427943 SPAG11AQ6PDA7 123 aa10.53□□□□□ -0.72
PSPC1-202ENST00000427943 Q9BRP9 147 aa10.53□□□□□ -0.72
PSPC1-202ENST00000427943 IGLV6-57P01721 117 aa10.52□□□□□ -0.73
PSPC1-202ENST00000427943 TPRXLQ17RH7 258 aa10.52□□□□□ -0.73
PSPC1-202ENST00000427943 LINC00483Q53H64 154 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms