RNA–Protein interactions for RNA: ENST00000426921.5

UBXN4-204, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-204ENST00000426921 CHTOPQ9Y3Y2 248 aaKnown RBP12.12□□□□□ -0.47
UBXN4-204ENST00000426921 APOC3P02656 99 aa12.11□□□□□ -0.47
UBXN4-204ENST00000426921 CTAG1AP78358 180 aa12.11□□□□□ -0.47
UBXN4-204ENST00000426921 SVBPQ8N300 66 aa12.11□□□□□ -0.47
UBXN4-204ENST00000426921 TRAV12-1A0A0B4J245 112 aa12.1□□□□□ -0.47
UBXN4-204ENST00000426921 SNAPINO95295 136 aa12.1□□□□□ -0.47
UBXN4-204ENST00000426921 IGKV2D-26A0A0A0MRZ7 120 aa12.09□□□□□ -0.47
UBXN4-204ENST00000426921 TMEM223A0PJW6 202 aa12.09□□□□□ -0.47
UBXN4-204ENST00000426921 CHCHD1Q96BP2 118 aaKnown RBP12.09□□□□□ -0.47
UBXN4-204ENST00000426921 PLEKHB2Q96CS7 222 aa12.09□□□□□ -0.47
UBXN4-204ENST00000426921 YPEL4Q96NS1 127 aa12.09□□□□□ -0.47
UBXN4-204ENST00000426921 LINC00158P58513 81 aa12.07□□□□□ -0.48
UBXN4-204ENST00000426921 NDUFA5Q16718 116 aa12.07□□□□□ -0.48
UBXN4-204ENST00000426921 CBLN2Q8IUK8 224 aa12.06□□□□□ -0.48
UBXN4-204ENST00000426921 IFI27L1Q96BM0 104 aa12.06□□□□□ -0.48
UBXN4-204ENST00000426921 RETNLBQ9BQ08 111 aa12.04□□□□□ -0.48
UBXN4-204ENST00000426921 MUC17Q685J3 4493 aa12.02□□□□□ -0.48
UBXN4-204ENST00000426921 HIGD2AQ9BW72 106 aa12.02□□□□□ -0.49
UBXN4-204ENST00000426921 A0A0U1RQV1 116 aa12.01□□□□□ -0.49
UBXN4-204ENST00000426921 A0A0U1RRA0 63 aa12.01□□□□□ -0.49
UBXN4-204ENST00000426921 SMIM13P0DJ93 91 aa12.01□□□□□ -0.49
UBXN4-204ENST00000426921 TPRXLQ17RH7 258 aa12.01□□□□□ -0.49
UBXN4-204ENST00000426921 C3orf22Q8N5N4 141 aa12.01□□□□□ -0.49
UBXN4-204ENST00000426921 SPRR4Q96PI1 79 aa12.01□□□□□ -0.49
UBXN4-204ENST00000426921 PRYO14603 147 aa12□□□□□ -0.49
UBXN4-204ENST00000426921 HERV-K104P63124 156 aa12□□□□□ -0.49
UBXN4-204ENST00000426921 SPRR1AP35321 89 aa11.99□□□□□ -0.49
UBXN4-204ENST00000426921 BOD1L2Q8IYS8 172 aa11.98□□□□□ -0.49
UBXN4-204ENST00000426921 MIR7-3HGQ8N6C7 128 aa11.98□□□□□ -0.49
UBXN4-204ENST00000426921 MEIG1Q5JSS6 88 aa11.97□□□□□ -0.49
UBXN4-204ENST00000426921 LINC00337Q8N6G1 96 aa11.97□□□□□ -0.49
UBXN4-204ENST00000426921 KCNQ1DNQ9H478 68 aa11.97□□□□□ -0.49
UBXN4-204ENST00000426921 ZNF706Q9Y5V0 76 aaPredicted RBP11.97□□□□□ -0.49
UBXN4-204ENST00000426921 LINC00587B1AMM8 73 aa11.96□□□□□ -0.49
UBXN4-204ENST00000426921 ATP6V1G1O75348 118 aa11.96□□□□□ -0.49
UBXN4-204ENST00000426921 HSBP1O75506 76 aa11.96□□□□□ -0.49
UBXN4-204ENST00000426921 IGLV7-46A0A075B6I9 117 aa11.95□□□□□ -0.5
UBXN4-204ENST00000426921 KRTAP4-16G5E9R7 235 aaPredicted RBP11.95□□□□□ -0.5
UBXN4-204ENST00000426921 SPAG11AQ6PDA7 123 aa11.95□□□□□ -0.5
UBXN4-204ENST00000426921 FAM19A2Q8N3H0 131 aa11.95□□□□□ -0.5
UBXN4-204ENST00000426921 NDUFA12Q9UI09 145 aa11.95□□□□□ -0.5
UBXN4-204ENST00000426921 NCR3O14931 201 aa11.93□□□□□ -0.5
UBXN4-204ENST00000426921 MYMXA0A1B0GTQ4 84 aa11.92□□□□□ -0.5
UBXN4-204ENST00000426921 CDIP1Q9H305 208 aa11.92□□□□□ -0.5
UBXN4-204ENST00000426921 TSPEAR-AS2P59090 65 aa11.91□□□□□ -0.5
UBXN4-204ENST00000426921 MAP1LC3CQ9BXW4 147 aa11.91□□□□□ -0.5
UBXN4-204ENST00000426921 FAT4Q6V0I7 4981 aa11.9□□□□□ -0.5
UBXN4-204ENST00000426921 LOC107984156A0A0G2JMH3 177 aa11.9□□□□□ -0.5
UBXN4-204ENST00000426921 TRBV10-3A0A0K0K1G6 114 aa11.9□□□□□ -0.5
UBXN4-204ENST00000426921 ARL17AQ8IVW1 177 aa11.9□□□□□ -0.5
UBXN4-204ENST00000426921 LINC00310P59036 64 aa11.89□□□□□ -0.51
UBXN4-204ENST00000426921 ETDCA0A1B0GVM5 59 aa11.88□□□□□ -0.51
UBXN4-204ENST00000426921 LEPROTL1O95214 131 aa11.88□□□□□ -0.51
UBXN4-204ENST00000426921 LINC00483Q53H64 154 aa11.88□□□□□ -0.51
UBXN4-204ENST00000426921 SMCR5Q8TEV8 140 aa11.88□□□□□ -0.51
UBXN4-204ENST00000426921 PPDPFQ9H3Y8 114 aa11.88□□□□□ -0.51
UBXN4-204ENST00000426921 H0Y8G0 127 aa11.87□□□□□ -0.51
UBXN4-204ENST00000426921 LEPROTO15243 131 aa11.87□□□□□ -0.51
UBXN4-204ENST00000426921 TRGC2P03986 189 aa11.87□□□□□ -0.51
UBXN4-204ENST00000426921 PLNP26678 52 aa11.87□□□□□ -0.51
UBXN4-204ENST00000426921 FP248Q71RG6 208 aaPredicted RBP11.87□□□□□ -0.51
UBXN4-204ENST00000426921 TRBV10-2A0A0K0K1G8 114 aa11.86□□□□□ -0.51
UBXN4-204ENST00000426921 SERF1AO75920 110 aa11.86□□□□□ -0.51
UBXN4-204ENST00000426921 LCE2AQ5TA79 106 aaPredicted RBP11.86□□□□□ -0.51
UBXN4-204ENST00000426921 Q8NBF4 154 aa11.86□□□□□ -0.51
UBXN4-204ENST00000426921 B5MCH6 92 aa11.84□□□□□ -0.51
UBXN4-204ENST00000426921 S100A12P80511 92 aa11.84□□□□□ -0.51
UBXN4-204ENST00000426921 C4orf48Q5BLP8 95 aa11.84□□□□□ -0.51
UBXN4-204ENST00000426921 DAND5Q8N907 189 aa11.84□□□□□ -0.51
UBXN4-204ENST00000426921 J3QQQ9 107 aa11.83□□□□□ -0.52
UBXN4-204ENST00000426921 NMUP48645 174 aa11.83□□□□□ -0.52
UBXN4-204ENST00000426921 HSPB8Q9UJY1 196 aa11.82□□□□□ -0.52
UBXN4-204ENST00000426921 DPM2O94777 84 aa11.81□□□□□ -0.52
UBXN4-204ENST00000426921 SPINK1P00995 79 aa11.81□□□□□ -0.52
UBXN4-204ENST00000426921 DDTP30046 118 aa11.81□□□□□ -0.52
UBXN4-204ENST00000426921 SPANXB1Q9NS25 103 aaPredicted RBP11.81□□□□□ -0.52
UBXN4-204ENST00000426921 HERVK_113P61574 105 aa11.8□□□□□ -0.52
UBXN4-204ENST00000426921 ERC2-IT1O76042 136 aa11.79□□□□□ -0.52
UBXN4-204ENST00000426921 NDUFC2O95298 119 aa11.79□□□□□ -0.52
UBXN4-204ENST00000426921 Q6ZRX8 168 aa11.79□□□□□ -0.52
UBXN4-204ENST00000426921 Q9BRP9 147 aa11.79□□□□□ -0.52
UBXN4-204ENST00000426921 IGLV6-57P01721 117 aa11.78□□□□□ -0.52
UBXN4-204ENST00000426921 IGKCP01834 107 aa11.78□□□□□ -0.52
UBXN4-204ENST00000426921 GAGE2AQ6NT46 116 aa11.78□□□□□ -0.52
UBXN4-204ENST00000426921 MIEN1Q9BRT3 115 aa11.78□□□□□ -0.52
UBXN4-204ENST00000426921 LGALS3P17931 250 aaKnown RBP11.77□□□□□ -0.53
UBXN4-204ENST00000426921 KRTAP13-3Q3SY46 172 aa11.77□□□□□ -0.53
UBXN4-204ENST00000426921 PMCHL2Q9BQD1 86 aa11.77□□□□□ -0.53
UBXN4-204ENST00000426921 FABP4P15090 132 aa11.76□□□□□ -0.53
UBXN4-204ENST00000426921 RPS29P62273 56 aaKnown RBP11.76□□□□□ -0.53
UBXN4-204ENST00000426921 MOBPQ13875 183 aa11.74□□□□□ -0.53
UBXN4-204ENST00000426921 SSBP3-AS1Q7Z2R9 100 aa11.74□□□□□ -0.53
UBXN4-204ENST00000426921 SOSTDC1Q6X4U4 206 aa11.73□□□□□ -0.53
UBXN4-204ENST00000426921 IGLV9-49A0A0B4J1Y8 123 aa11.72□□□□□ -0.53
UBXN4-204ENST00000426921 COLCA2A8K830 154 aa11.72□□□□□ -0.53
UBXN4-204ENST00000426921 S100A7L2Q5SY68 101 aa11.72□□□□□ -0.53
UBXN4-204ENST00000426921 TRAV23DV6A0A075B6W5 121 aa11.71□□□□□ -0.53
UBXN4-204ENST00000426921 A0A0J9YXY3 114 aa11.71□□□□□ -0.53
UBXN4-204ENST00000426921 E9PLD3 99 aa11.71□□□□□ -0.53
UBXN4-204ENST00000426921 EIF4EBP3O60516 100 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms