RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 LINC00476Q8WZB0 136 aa12.28□□□□□ -0.44
ARHGEF28-203ENST00000426542 SMCPP49901 116 aaPredicted RBP12.27□□□□□ -0.45
ARHGEF28-203ENST00000426542 Q6ZRX8 168 aa12.27□□□□□ -0.45
ARHGEF28-203ENST00000426542 EPM2AB3EWF7 344 aa12.26□□□□□ -0.45
ARHGEF28-203ENST00000426542 Q6ZQT0 140 aa12.25□□□□□ -0.45
ARHGEF28-203ENST00000426542 ST20-AS1Q8NBB2 130 aa12.25□□□□□ -0.45
ARHGEF28-203ENST00000426542 Q8NBF4 154 aa12.25□□□□□ -0.45
ARHGEF28-203ENST00000426542 LINC00313P59037 77 aa12.24□□□□□ -0.45
ARHGEF28-203ENST00000426542 KRTAP24-1Q3LI83 254 aa12.24□□□□□ -0.45
ARHGEF28-203ENST00000426542 SPAG11AQ6PDA7 123 aa12.24□□□□□ -0.45
ARHGEF28-203ENST00000426542 TYMSOSQ8TAI1 123 aa12.23□□□□□ -0.45
ARHGEF28-203ENST00000426542 FAM229AH3BQW9 127 aa12.23□□□□□ -0.45
ARHGEF28-203ENST00000426542 PTPRBP23467 1997 aa12.23□□□□□ -0.45
ARHGEF28-203ENST00000426542 NBDYA0A0U1RRE5 68 aa12.23□□□□□ -0.45
ARHGEF28-203ENST00000426542 C16orf90A8MZG2 172 aa12.22□□□□□ -0.45
ARHGEF28-203ENST00000426542 RPL37AP61513 92 aaKnown RBP12.22□□□□□ -0.45
ARHGEF28-203ENST00000426542 LINC00588Q9Y4M8 146 aa12.21□□□□□ -0.45
ARHGEF28-203ENST00000426542 Q6ZRP5 223 aa12.21□□□□□ -0.46
ARHGEF28-203ENST00000426542 DOPEY1Q5JWR5 2465 aa12.2□□□□□ -0.46
ARHGEF28-203ENST00000426542 COL27A1Q8IZC6 1860 aaPredicted RBP12.2□□□□□ -0.46
ARHGEF28-203ENST00000426542 A0A1B0GW54 56 aa12.2□□□□□ -0.46
ARHGEF28-203ENST00000426542 LOC110117498A0A087WWA1 95 aa12.2□□□□□ -0.46
ARHGEF28-203ENST00000426542 MUC4Q99102 2169 aa12.19□□□□□ -0.46
ARHGEF28-203ENST00000426542 Q8NAQ8 132 aa12.19□□□□□ -0.46
ARHGEF28-203ENST00000426542 COL4A2P08572 1712 aa12.19□□□□□ -0.46
ARHGEF28-203ENST00000426542 BCE1O60756 84 aa12.18□□□□□ -0.46
ARHGEF28-203ENST00000426542 PRO0461Q9UI25 63 aa12.16□□□□□ -0.46
ARHGEF28-203ENST00000426542 GVQW2A0A096LPI5 108 aaPredicted RBP12.15□□□□□ -0.46
ARHGEF28-203ENST00000426542 Q96NJ1 140 aa12.15□□□□□ -0.46
ARHGEF28-203ENST00000426542 TRAV22A0A0B4J277 110 aa12.14□□□□□ -0.47
ARHGEF28-203ENST00000426542 H3BPC8 53 aa12.14□□□□□ -0.47
ARHGEF28-203ENST00000426542 IGLV8-61A0A075B6I0 122 aa12.13□□□□□ -0.47
ARHGEF28-203ENST00000426542 TM2D3Q9BRN9 247 aa12.12□□□□□ -0.47
ARHGEF28-203ENST00000426542 PRO0628Q9UI54 55 aa12.12□□□□□ -0.47
ARHGEF28-203ENST00000426542 FAM168BA1KXE4 195 aa12.12□□□□□ -0.47
ARHGEF28-203ENST00000426542 C4orf26Q17RF5 130 aa12.12□□□□□ -0.47
ARHGEF28-203ENST00000426542 MYO9AB2RTY4 2548 aa12.11□□□□□ -0.47
ARHGEF28-203ENST00000426542 PIEZO1Q92508 2521 aa12.1□□□□□ -0.47
ARHGEF28-203ENST00000426542 PLA2G1BP04054 148 aaKnown RBP12.09□□□□□ -0.47
ARHGEF28-203ENST00000426542 ATP11AUNQ6ZP68 121 aa12.09□□□□□ -0.47
ARHGEF28-203ENST00000426542 SRCAPQ6ZRS2 3230 aa12.08□□□□□ -0.48
ARHGEF28-203ENST00000426542 LRRK2Q5S007 2527 aa12.06□□□□□ -0.48
ARHGEF28-203ENST00000426542 VPREB1P12018 145 aa12.05□□□□□ -0.48
ARHGEF28-203ENST00000426542 DNAH10OSP0CZ25 163 aa12.05□□□□□ -0.48
ARHGEF28-203ENST00000426542 TRBV7-4A0A0J9YYF1 115 aa12.04□□□□□ -0.48
ARHGEF28-203ENST00000426542 IGLV6-57P01721 117 aa12.04□□□□□ -0.48
ARHGEF28-203ENST00000426542 LITAFQ99732 161 aa12.03□□□□□ -0.48
ARHGEF28-203ENST00000426542 SERTAD4-AS1Q5TG53 156 aa12.03□□□□□ -0.48
ARHGEF28-203ENST00000426542 A8MWP4 228 aa12.03□□□□□ -0.48
ARHGEF28-203ENST00000426542 JMJD1CQ15652 2540 aa12.02□□□□□ -0.48
ARHGEF28-203ENST00000426542 TLN1Q9Y490 2541 aaKnown RBP12.01□□□□□ -0.49
ARHGEF28-203ENST00000426542 K7EQZ3 153 aa12.01□□□□□ -0.49
ARHGEF28-203ENST00000426542 WWC2-AS2Q96NR7 200 aa12.01□□□□□ -0.49
ARHGEF28-203ENST00000426542 LOC101927531A0A1B0GV80 90 aa12□□□□□ -0.49
ARHGEF28-203ENST00000426542 C8orf87E5RJ46 101 aa12□□□□□ -0.49
ARHGEF28-203ENST00000426542 ABCA12Q86UK0 2595 aa11.99□□□□□ -0.49
ARHGEF28-203ENST00000426542 RPS28P62857 69 aaKnown RBP11.99□□□□□ -0.49
ARHGEF28-203ENST00000426542 IGLV1-50A0A075B6I6 118 aa11.98□□□□□ -0.49
ARHGEF28-203ENST00000426542 MRPL34Q9BQ48 92 aaKnown RBP11.98□□□□□ -0.49
ARHGEF28-203ENST00000426542 J3QL48 77 aa11.96□□□□□ -0.49
ARHGEF28-203ENST00000426542 FN1P02751 2386 aaKnown RBP11.96□□□□□ -0.49
ARHGEF28-203ENST00000426542 SPINT4Q6UDR6 99 aa11.94□□□□□ -0.5
ARHGEF28-203ENST00000426542 KLK9Q2XQG4 91 aa11.93□□□□□ -0.5
ARHGEF28-203ENST00000426542 CSNK1G2-AS1Q8NCQ2 148 aa11.93□□□□□ -0.5
ARHGEF28-203ENST00000426542 DSCR10P59022 87 aa11.92□□□□□ -0.5
ARHGEF28-203ENST00000426542 KCNQ1DNQ9H478 68 aa11.92□□□□□ -0.5
ARHGEF28-203ENST00000426542 COA5Q86WW8 74 aa11.92□□□□□ -0.5
ARHGEF28-203ENST00000426542 KRTAP10-11P60412 298 aa11.91□□□□□ -0.5
ARHGEF28-203ENST00000426542 ZFYVE26Q68DK2 2539 aa11.91□□□□□ -0.5
ARHGEF28-203ENST00000426542 IGFL1Q6UW32 110 aa11.9□□□□□ -0.5
ARHGEF28-203ENST00000426542 WDR87Q6ZQQ6 2873 aa11.9□□□□□ -0.5
ARHGEF28-203ENST00000426542 LINC01600Q96MT4 127 aa11.9□□□□□ -0.51
ARHGEF28-203ENST00000426542 PCSK5Q92824 1860 aa11.87□□□□□ -0.51
ARHGEF28-203ENST00000426542 LINC00528Q8N1L1 170 aa11.87□□□□□ -0.51
ARHGEF28-203ENST00000426542 COX6B2Q6YFQ2 88 aa11.86□□□□□ -0.51
ARHGEF28-203ENST00000426542 C15orf56Q8N910 161 aa11.86□□□□□ -0.51
ARHGEF28-203ENST00000426542 K7EIL1 84 aa11.85□□□□□ -0.51
ARHGEF28-203ENST00000426542 SSBP3-AS1Q7Z2R9 100 aa11.85□□□□□ -0.51
ARHGEF28-203ENST00000426542 C9orf92A6NGG3 77 aa11.85□□□□□ -0.51
ARHGEF28-203ENST00000426542 C8orf17Q9NRJ1 99 aa11.84□□□□□ -0.51
ARHGEF28-203ENST00000426542 TLN2Q9Y4G6 2542 aa11.84□□□□□ -0.51
ARHGEF28-203ENST00000426542 A8MUN3 132 aa11.84□□□□□ -0.51
ARHGEF28-203ENST00000426542 ERC2-IT1O76042 136 aa11.84□□□□□ -0.51
ARHGEF28-203ENST00000426542 LINC00304Q8N9R0 145 aa11.84□□□□□ -0.51
ARHGEF28-203ENST00000426542 OBSCN-AS1Q96MR7 158 aa11.83□□□□□ -0.52
ARHGEF28-203ENST00000426542 USP9XQ93008 2570 aaPredicted RBP11.83□□□□□ -0.52
ARHGEF28-203ENST00000426542 C9orf129Q5T035 196 aaKnown RBP11.82□□□□□ -0.52
ARHGEF28-203ENST00000426542 APLNQ9ULZ1 77 aa11.82□□□□□ -0.52
ARHGEF28-203ENST00000426542 EIF4EBP3O60516 100 aaPredicted RBP11.81□□□□□ -0.52
ARHGEF28-203ENST00000426542 PRR15Q8IV56 129 aa11.8□□□□□ -0.52
ARHGEF28-203ENST00000426542 A0A0G2JQZ4 141 aa11.8□□□□□ -0.52
ARHGEF28-203ENST00000426542 A0A1W2PNN7 141 aa11.8□□□□□ -0.52
ARHGEF28-203ENST00000426542 ZNF861PO60384 105 aa11.8□□□□□ -0.52
ARHGEF28-203ENST00000426542 PRR34Q9NV39 138 aa11.79□□□□□ -0.52
ARHGEF28-203ENST00000426542 C19orf73Q9NVV2 129 aa11.79□□□□□ -0.52
ARHGEF28-203ENST00000426542 A0A1B0GVX0 72 aa11.79□□□□□ -0.52
ARHGEF28-203ENST00000426542 UQCR11O14957 56 aa11.78□□□□□ -0.52
ARHGEF28-203ENST00000426542 Q8N377 158 aa11.78□□□□□ -0.52
ARHGEF28-203ENST00000426542 KRTAP10-3P60369 221 aa11.77□□□□□ -0.53
ARHGEF28-203ENST00000426542 EP400Q96L91 3159 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms