RNA–Protein interactions for RNA: ENST00000425451.2

HDAC7-208, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-208ENST00000425451 ASB16-AS1Q495Z4 193 aa9.93□□□□□ -0.82
HDAC7-208ENST00000425451 FA2HQ7L5A8 372 aa9.93□□□□□ -0.82
HDAC7-208ENST00000425451 UQCC3Q6UW78 93 aa9.91□□□□□ -0.82
HDAC7-208ENST00000425451 LINC00337Q8N6G1 96 aa9.91□□□□□ -0.82
HDAC7-208ENST00000425451 DAND5Q8N907 189 aa9.91□□□□□ -0.82
HDAC7-208ENST00000425451 NDUFA6P56556 154 aa9.9□□□□□ -0.82
HDAC7-208ENST00000425451 Q8NBF4 154 aa9.9□□□□□ -0.82
HDAC7-208ENST00000425451 SMCO4Q9NRQ5 59 aa9.9□□□□□ -0.82
HDAC7-208ENST00000425451 C4orf48Q5BLP8 95 aa9.89□□□□□ -0.83
HDAC7-208ENST00000425451 URB1-AS1Q96HZ7 61 aa9.89□□□□□ -0.83
HDAC7-208ENST00000425451 C11orf86A6NJI1 115 aa9.88□□□□□ -0.83
HDAC7-208ENST00000425451 LCE2DQ5TA82 110 aaPredicted RBP9.88□□□□□ -0.83
HDAC7-208ENST00000425451 ZNF706Q9Y5V0 76 aaPredicted RBP9.87□□□□□ -0.83
HDAC7-208ENST00000425451 LINC01547P58512 204 aaPredicted RBP9.86□□□□□ -0.83
HDAC7-208ENST00000425451 FABP9Q0Z7S8 132 aa9.86□□□□□ -0.83
HDAC7-208ENST00000425451 SFTA2Q6UW10 78 aa9.86□□□□□ -0.83
HDAC7-208ENST00000425451 COMMD7Q86VX2 200 aa9.86□□□□□ -0.83
HDAC7-208ENST00000425451 SEC11CQ9BY50 192 aa9.86□□□□□ -0.83
HDAC7-208ENST00000425451 S100PP25815 95 aa9.85□□□□□ -0.83
HDAC7-208ENST00000425451 LINC00158P58513 81 aa9.85□□□□□ -0.83
HDAC7-208ENST00000425451 COX19Q49B96 90 aa9.85□□□□□ -0.83
HDAC7-208ENST00000425451 A0A0U1RRA0 63 aa9.84□□□□□ -0.83
HDAC7-208ENST00000425451 KRTAP4-16G5E9R7 235 aaPredicted RBP9.84□□□□□ -0.83
HDAC7-208ENST00000425451 SPINK1P00995 79 aa9.84□□□□□ -0.83
HDAC7-208ENST00000425451 SPRR1AP35321 89 aa9.84□□□□□ -0.83
HDAC7-208ENST00000425451 C10orf91Q5T1B1 145 aa9.84□□□□□ -0.83
HDAC7-208ENST00000425451 TMEM170BQ5T4T1 132 aa9.84□□□□□ -0.83
HDAC7-208ENST00000425451 BAGE3Q86Y29 109 aa9.84□□□□□ -0.83
HDAC7-208ENST00000425451 SMCR5Q8TEV8 140 aa9.84□□□□□ -0.83
HDAC7-208ENST00000425451 PMCHL1Q16048 86 aa9.83□□□□□ -0.84
HDAC7-208ENST00000425451 PRYO14603 147 aa9.82□□□□□ -0.84
HDAC7-208ENST00000425451 HBDP02042 147 aa9.82□□□□□ -0.84
HDAC7-208ENST00000425451 LINC00614P0C842 121 aa9.82□□□□□ -0.84
HDAC7-208ENST00000425451 LINC00483Q53H64 154 aa9.82□□□□□ -0.84
HDAC7-208ENST00000425451 KCNQ1DNQ9H478 68 aa9.82□□□□□ -0.84
HDAC7-208ENST00000425451 SEC61BP60468 96 aaKnown RBP9.81□□□□□ -0.84
HDAC7-208ENST00000425451 C18orf32Q8TCD1 76 aa9.81□□□□□ -0.84
HDAC7-208ENST00000425451 SMIM13P0DJ93 91 aa9.79□□□□□ -0.84
HDAC7-208ENST00000425451 BOD1L2Q8IYS8 172 aa9.79□□□□□ -0.84
HDAC7-208ENST00000425451 TMEM223A0PJW6 202 aa9.78□□□□□ -0.84
HDAC7-208ENST00000425451 NCR3O14931 201 aa9.78□□□□□ -0.84
HDAC7-208ENST00000425451 Q8N377 158 aa9.78□□□□□ -0.84
HDAC7-208ENST00000425451 RPS10P5Q9NQ39 176 aa9.77□□□□□ -0.85
HDAC7-208ENST00000425451 CRCT1Q9UGL9 99 aa9.77□□□□□ -0.85
HDAC7-208ENST00000425451 CHTOPQ9Y3Y2 248 aaKnown RBP9.77□□□□□ -0.85
HDAC7-208ENST00000425451 TRBV10-3A0A0K0K1G6 114 aa9.76□□□□□ -0.85
HDAC7-208ENST00000425451 ETDCA0A1B0GVM5 59 aa9.76□□□□□ -0.85
HDAC7-208ENST00000425451 RPS29P62273 56 aaKnown RBP9.76□□□□□ -0.85
HDAC7-208ENST00000425451 LCE2CQ5TA81 110 aa9.76□□□□□ -0.85
HDAC7-208ENST00000425451 GAGE2AQ6NT46 116 aa9.76□□□□□ -0.85
HDAC7-208ENST00000425451 FSIP2Q5CZC0 6907 aa9.76□□□□□ -0.85
HDAC7-208ENST00000425451 ERC2-IT1O76042 136 aa9.75□□□□□ -0.85
HDAC7-208ENST00000425451 MIR7-3HGQ8N6C7 128 aa9.75□□□□□ -0.85
HDAC7-208ENST00000425451 MOBPQ13875 183 aa9.74□□□□□ -0.85
HDAC7-208ENST00000425451 RHEBQ15382 184 aa9.74□□□□□ -0.85
HDAC7-208ENST00000425451 XP32Q5T750 250 aa9.74□□□□□ -0.85
HDAC7-208ENST00000425451 SSBP3-AS1Q7Z2R9 100 aa9.74□□□□□ -0.85
HDAC7-208ENST00000425451 TRAPPC1Q9Y5R8 145 aa9.74□□□□□ -0.85
HDAC7-208ENST00000425451 IGLV9-49A0A0B4J1Y8 123 aa9.73□□□□□ -0.85
HDAC7-208ENST00000425451 B5MCH6 92 aa9.73□□□□□ -0.85
HDAC7-208ENST00000425451 ATP6V1G1O75348 118 aa9.73□□□□□ -0.85
HDAC7-208ENST00000425451 NDUFA12Q9UI09 145 aa9.73□□□□□ -0.85
HDAC7-208ENST00000425451 MEIG1Q5JSS6 88 aa9.72□□□□□ -0.85
HDAC7-208ENST00000425451 FAM19A2Q8N3H0 131 aa9.72□□□□□ -0.85
HDAC7-208ENST00000425451 TRAV12-1A0A0B4J245 112 aa9.71□□□□□ -0.86
HDAC7-208ENST00000425451 SLC25A20O43772 301 aa9.71□□□□□ -0.86
HDAC7-208ENST00000425451 HERV-K104P63124 156 aa9.7□□□□□ -0.86
HDAC7-208ENST00000425451 KRTAP19-2Q3LHN2 52 aa9.7□□□□□ -0.86
HDAC7-208ENST00000425451 Q9BRP9 147 aa9.7□□□□□ -0.86
HDAC7-208ENST00000425451 APOC3P02656 99 aa9.68□□□□□ -0.86
HDAC7-208ENST00000425451 LOC107984156A0A0G2JMH3 177 aa9.67□□□□□ -0.86
HDAC7-208ENST00000425451 ARL17AQ8IVW1 177 aa9.67□□□□□ -0.86
HDAC7-208ENST00000425451 IFI27L1Q96BM0 104 aa9.67□□□□□ -0.86
HDAC7-208ENST00000425451 LINC00587B1AMM8 73 aa9.66□□□□□ -0.86
HDAC7-208ENST00000425451 Q6ZRX8 168 aa9.66□□□□□ -0.86
HDAC7-208ENST00000425451 DDTP30046 118 aa9.65□□□□□ -0.86
HDAC7-208ENST00000425451 S100A12P80511 92 aa9.65□□□□□ -0.86
HDAC7-208ENST00000425451 YPEL4Q96NS1 127 aa9.64□□□□□ -0.87
HDAC7-208ENST00000425451 TRBV10-2A0A0K0K1G8 114 aa9.63□□□□□ -0.87
HDAC7-208ENST00000425451 MYMXA0A1B0GTQ4 84 aa9.63□□□□□ -0.87
HDAC7-208ENST00000425451 MT1HP80294 61 aa9.63□□□□□ -0.87
HDAC7-208ENST00000425451 MAP1LC3CQ9BXW4 147 aa9.63□□□□□ -0.87
HDAC7-208ENST00000425451 SNAPINO95295 136 aa9.62□□□□□ -0.87
HDAC7-208ENST00000425451 TSPEAR-AS2P59090 65 aa9.62□□□□□ -0.87
HDAC7-208ENST00000425451 SVBPQ8N300 66 aa9.62□□□□□ -0.87
HDAC7-208ENST00000425451 CHCHD1Q96BP2 118 aaKnown RBP9.62□□□□□ -0.87
HDAC7-208ENST00000425451 IGLV6-57P01721 117 aa9.6□□□□□ -0.87
HDAC7-208ENST00000425451 C9orf153Q5TBE3 101 aa9.59□□□□□ -0.87
HDAC7-208ENST00000425451 NDUFA5Q16718 116 aa9.58□□□□□ -0.88
HDAC7-208ENST00000425451 ST20-AS1Q8NBB2 130 aa9.58□□□□□ -0.88
HDAC7-208ENST00000425451 SPANXB1Q9NS25 103 aaPredicted RBP9.58□□□□□ -0.88
HDAC7-208ENST00000425451 LEPROTO15243 131 aa9.57□□□□□ -0.88
HDAC7-208ENST00000425451 PCOTHQ58A44 107 aa9.57□□□□□ -0.88
HDAC7-208ENST00000425451 NDUFC2O95298 119 aa9.55□□□□□ -0.88
HDAC7-208ENST00000425451 JOSD1Q15040 202 aaPredicted RBP9.55□□□□□ -0.88
HDAC7-208ENST00000425451 S100A7L2Q5SY68 101 aa9.55□□□□□ -0.88
HDAC7-208ENST00000425451 TRAV23DV6A0A075B6W5 121 aa9.54□□□□□ -0.88
HDAC7-208ENST00000425451 EIF4EBP3O60516 100 aaPredicted RBP9.54□□□□□ -0.88
HDAC7-208ENST00000425451 IGLV8-61A0A075B6I0 122 aa9.53□□□□□ -0.88
HDAC7-208ENST00000425451 H0Y8G0 127 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms