RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 SNAPINO95295 136 aa8.49□□□□□ -1.05
ATG4B-209ENST00000425239 ZNF22P17026 224 aaPredicted RBP8.49□□□□□ -1.05
ATG4B-209ENST00000425239 URB1-AS1Q96HZ7 61 aa8.49□□□□□ -1.05
ATG4B-209ENST00000425239 S100A1P23297 94 aa8.48□□□□□ -1.05
ATG4B-209ENST00000425239 RHEBQ15382 184 aa8.48□□□□□ -1.05
ATG4B-209ENST00000425239 KRTAP13-3Q3SY46 172 aa8.48□□□□□ -1.05
ATG4B-209ENST00000425239 CBLN2Q8IUK8 224 aa8.48□□□□□ -1.05
ATG4B-209ENST00000425239 SPRR4Q96PI1 79 aa8.48□□□□□ -1.05
ATG4B-209ENST00000425239 RPL24P83731 157 aaKnown RBP8.47□□□□□ -1.05
ATG4B-209ENST00000425239 SPAG11AQ6PDA7 123 aa8.47□□□□□ -1.05
ATG4B-209ENST00000425239 ZNF625Q96I27 306 aaPredicted RBP8.47□□□□□ -1.05
ATG4B-209ENST00000425239 FP248Q71RG6 208 aaPredicted RBP8.46□□□□□ -1.06
ATG4B-209ENST00000425239 RPS10P5Q9NQ39 176 aa8.46□□□□□ -1.06
ATG4B-209ENST00000425239 ASB16-AS1Q495Z4 193 aa8.45□□□□□ -1.06
ATG4B-209ENST00000425239 HIGD2AQ9BW72 106 aa8.45□□□□□ -1.06
ATG4B-209ENST00000425239 C11orf86A6NJI1 115 aa8.43□□□□□ -1.06
ATG4B-209ENST00000425239 FA2HQ7L5A8 372 aa8.43□□□□□ -1.06
ATG4B-209ENST00000425239 KRTAP4-16G5E9R7 235 aaPredicted RBP8.42□□□□□ -1.06
ATG4B-209ENST00000425239 SPRR1AP35321 89 aa8.42□□□□□ -1.06
ATG4B-209ENST00000425239 LCE2DQ5TA82 110 aaPredicted RBP8.42□□□□□ -1.06
ATG4B-209ENST00000425239 DAND5Q8N907 189 aa8.42□□□□□ -1.06
ATG4B-209ENST00000425239 SMCO4Q9NRQ5 59 aa8.41□□□□□ -1.06
ATG4B-209ENST00000425239 S100PP25815 95 aa8.4□□□□□ -1.06
ATG4B-209ENST00000425239 NDUFA6P56556 154 aa8.4□□□□□ -1.06
ATG4B-209ENST00000425239 FABP9Q0Z7S8 132 aa8.4□□□□□ -1.06
ATG4B-209ENST00000425239 Q8NBF4 154 aa8.4□□□□□ -1.06
ATG4B-209ENST00000425239 LINC00614P0C842 121 aa8.39□□□□□ -1.07
ATG4B-209ENST00000425239 COX19Q49B96 90 aa8.39□□□□□ -1.07
ATG4B-209ENST00000425239 SFTA2Q6UW10 78 aa8.39□□□□□ -1.07
ATG4B-209ENST00000425239 C18orf32Q8TCD1 76 aa8.39□□□□□ -1.07
ATG4B-209ENST00000425239 PMCHL1Q16048 86 aa8.38□□□□□ -1.07
ATG4B-209ENST00000425239 LINC00483Q53H64 154 aa8.38□□□□□ -1.07
ATG4B-209ENST00000425239 BAGE3Q86Y29 109 aa8.38□□□□□ -1.07
ATG4B-209ENST00000425239 LINC00337Q8N6G1 96 aa8.38□□□□□ -1.07
ATG4B-209ENST00000425239 SMCR5Q8TEV8 140 aa8.38□□□□□ -1.07
ATG4B-209ENST00000425239 KCNQ1DNQ9H478 68 aa8.38□□□□□ -1.07
ATG4B-209ENST00000425239 FSIP2Q5CZC0 6907 aa8.37□□□□□ -1.07
ATG4B-209ENST00000425239 SPINK1P00995 79 aa8.37□□□□□ -1.07
ATG4B-209ENST00000425239 HBDP02042 147 aa8.37□□□□□ -1.07
ATG4B-209ENST00000425239 LINC00158P58513 81 aa8.36□□□□□ -1.07
ATG4B-209ENST00000425239 C4orf48Q5BLP8 95 aa8.36□□□□□ -1.07
ATG4B-209ENST00000425239 TMEM170BQ5T4T1 132 aa8.36□□□□□ -1.07
ATG4B-209ENST00000425239 LCE2CQ5TA81 110 aa8.36□□□□□ -1.07
ATG4B-209ENST00000425239 ZNF706Q9Y5V0 76 aaPredicted RBP8.36□□□□□ -1.07
ATG4B-209ENST00000425239 A0A0U1RRA0 63 aa8.35□□□□□ -1.07
ATG4B-209ENST00000425239 TMEM223A0PJW6 202 aa8.35□□□□□ -1.07
ATG4B-209ENST00000425239 PRYO14603 147 aa8.35□□□□□ -1.07
ATG4B-209ENST00000425239 SMIM13P0DJ93 91 aa8.34□□□□□ -1.07
ATG4B-209ENST00000425239 LINC01547P58512 204 aaPredicted RBP8.34□□□□□ -1.07
ATG4B-209ENST00000425239 Q8N377 158 aa8.34□□□□□ -1.07
ATG4B-209ENST00000425239 YPEL4Q96NS1 127 aa8.33□□□□□ -1.08
ATG4B-209ENST00000425239 ERC2-IT1O76042 136 aa8.32□□□□□ -1.08
ATG4B-209ENST00000425239 RPS29P62273 56 aaKnown RBP8.32□□□□□ -1.08
ATG4B-209ENST00000425239 KRTAP19-2Q3LHN2 52 aa8.32□□□□□ -1.08
ATG4B-209ENST00000425239 BOD1L2Q8IYS8 172 aa8.32□□□□□ -1.08
ATG4B-209ENST00000425239 CHTOPQ9Y3Y2 248 aaKnown RBP8.32□□□□□ -1.08
ATG4B-209ENST00000425239 TRBV10-3A0A0K0K1G6 114 aa8.31□□□□□ -1.08
ATG4B-209ENST00000425239 B5MCH6 92 aa8.31□□□□□ -1.08
ATG4B-209ENST00000425239 SEC61BP60468 96 aaKnown RBP8.31□□□□□ -1.08
ATG4B-209ENST00000425239 MIR7-3HGQ8N6C7 128 aa8.31□□□□□ -1.08
ATG4B-209ENST00000425239 NCR3O14931 201 aa8.3□□□□□ -1.08
ATG4B-209ENST00000425239 XP32Q5T750 250 aa8.3□□□□□ -1.08
ATG4B-209ENST00000425239 CRCT1Q9UGL9 99 aa8.3□□□□□ -1.08
ATG4B-209ENST00000425239 TRAPPC1Q9Y5R8 145 aa8.3□□□□□ -1.08
ATG4B-209ENST00000425239 TRAV12-1A0A0B4J245 112 aa8.29□□□□□ -1.08
ATG4B-209ENST00000425239 LOC107984156A0A0G2JMH3 177 aa8.29□□□□□ -1.08
ATG4B-209ENST00000425239 SSBP3-AS1Q7Z2R9 100 aa8.29□□□□□ -1.08
ATG4B-209ENST00000425239 ARL17AQ8IVW1 177 aa8.29□□□□□ -1.08
ATG4B-209ENST00000425239 Q9BRP9 147 aa8.29□□□□□ -1.08
ATG4B-209ENST00000425239 COLCA2A8K830 154 aa8.28□□□□□ -1.08
ATG4B-209ENST00000425239 GAGE2AQ6NT46 116 aa8.28□□□□□ -1.08
ATG4B-209ENST00000425239 ETDCA0A1B0GVM5 59 aa8.27□□□□□ -1.09
ATG4B-209ENST00000425239 MOBPQ13875 183 aa8.26□□□□□ -1.09
ATG4B-209ENST00000425239 HERV-K104P63124 156 aa8.25□□□□□ -1.09
ATG4B-209ENST00000425239 IGLV9-49A0A0B4J1Y8 123 aa8.24□□□□□ -1.09
ATG4B-209ENST00000425239 MEIG1Q5JSS6 88 aa8.24□□□□□ -1.09
ATG4B-209ENST00000425239 IFI27L1Q96BM0 104 aa8.24□□□□□ -1.09
ATG4B-209ENST00000425239 SLC25A20O43772 301 aa8.23□□□□□ -1.09
ATG4B-209ENST00000425239 Q6ZRX8 168 aa8.23□□□□□ -1.09
ATG4B-209ENST00000425239 NDUFA12Q9UI09 145 aa8.23□□□□□ -1.09
ATG4B-209ENST00000425239 TSPEAR-AS2P59090 65 aa8.22□□□□□ -1.09
ATG4B-209ENST00000425239 FAM19A2Q8N3H0 131 aa8.22□□□□□ -1.09
ATG4B-209ENST00000425239 TRBV10-2A0A0K0K1G8 114 aa8.21□□□□□ -1.1
ATG4B-209ENST00000425239 LINC00587B1AMM8 73 aa8.21□□□□□ -1.1
ATG4B-209ENST00000425239 DDTP30046 118 aa8.21□□□□□ -1.1
ATG4B-209ENST00000425239 MT1HP80294 61 aa8.21□□□□□ -1.1
ATG4B-209ENST00000425239 CHCHD1Q96BP2 118 aaKnown RBP8.21□□□□□ -1.1
ATG4B-209ENST00000425239 IGLV6-57P01721 117 aa8.2□□□□□ -1.1
ATG4B-209ENST00000425239 TRGC2P03986 189 aa8.2□□□□□ -1.1
ATG4B-209ENST00000425239 MYMXA0A1B0GTQ4 84 aa8.19□□□□□ -1.1
ATG4B-209ENST00000425239 EIF4EBP3O60516 100 aaPredicted RBP8.17□□□□□ -1.1
ATG4B-209ENST00000425239 MAP1LC3CQ9BXW4 147 aa8.17□□□□□ -1.1
ATG4B-209ENST00000425239 LEPROTO15243 131 aa8.16□□□□□ -1.1
ATG4B-209ENST00000425239 ST20-AS1Q8NBB2 130 aa8.16□□□□□ -1.1
ATG4B-209ENST00000425239 NDUFC2O95298 119 aa8.15□□□□□ -1.1
ATG4B-209ENST00000425239 S100A12P80511 92 aa8.15□□□□□ -1.1
ATG4B-209ENST00000425239 SPANXB1Q9NS25 103 aaPredicted RBP8.15□□□□□ -1.1
ATG4B-209ENST00000425239 FLGP20930 4061 aaPredicted RBP8.15□□□□□ -1.11
ATG4B-209ENST00000425239 SOSTDC1Q6X4U4 206 aa8.14□□□□□ -1.11
ATG4B-209ENST00000425239 LORP23490 312 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms