RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 ADCYAP1P18509 176 aa9.26□□□□□ -0.93
CHCHD3-202ENST00000423635 RAB14P61106 215 aa9.26□□□□□ -0.93
CHCHD3-202ENST00000423635 COX17Q14061 63 aa9.26□□□□□ -0.93
CHCHD3-202ENST00000423635 Q8N377 158 aa9.26□□□□□ -0.93
CHCHD3-202ENST00000423635 CST9LQ9H4G1 147 aa9.26□□□□□ -0.93
CHCHD3-202ENST00000423635 FAM19A2Q8N3H0 131 aa9.25□□□□□ -0.93
CHCHD3-202ENST00000423635 ERG28Q9UKR5 140 aa9.25□□□□□ -0.93
CHCHD3-202ENST00000423635 IGLV5-39A0A0G2JS06 123 aa9.23□□□□□ -0.93
CHCHD3-202ENST00000423635 AKAP14Q86UN6 197 aa9.23□□□□□ -0.93
CHCHD3-202ENST00000423635 LINC01549A6NIU2 74 aa9.22□□□□□ -0.93
CHCHD3-202ENST00000423635 H3BRM9 83 aa9.22□□□□□ -0.93
CHCHD3-202ENST00000423635 KRTAP10-6P60371 365 aaPredicted RBP9.22□□□□□ -0.93
CHCHD3-202ENST00000423635 SLC25A20O43772 301 aa9.21□□□□□ -0.94
CHCHD3-202ENST00000423635 LINC00483Q53H64 154 aa9.21□□□□□ -0.94
CHCHD3-202ENST00000423635 PMVKQ15126 192 aa9.2□□□□□ -0.94
CHCHD3-202ENST00000423635 SMCR5Q8TEV8 140 aa9.2□□□□□ -0.94
CHCHD3-202ENST00000423635 SSBP3-AS1Q7Z2R9 100 aa9.19□□□□□ -0.94
CHCHD3-202ENST00000423635 SPRR1AP35321 89 aa9.18□□□□□ -0.94
CHCHD3-202ENST00000423635 LINC01546A6NGU7 62 aa9.17□□□□□ -0.94
CHCHD3-202ENST00000423635 ANAPC16Q96DE5 110 aa9.17□□□□□ -0.94
CHCHD3-202ENST00000423635 ZNF625Q96I27 306 aaPredicted RBP9.16□□□□□ -0.94
CHCHD3-202ENST00000423635 KRTAP4-16G5E9R7 235 aaPredicted RBP9.15□□□□□ -0.94
CHCHD3-202ENST00000423635 PRYO14603 147 aa9.15□□□□□ -0.94
CHCHD3-202ENST00000423635 IGLC3P0DOY3 106 aa9.15□□□□□ -0.94
CHCHD3-202ENST00000423635 MT-ND4LP03901 98 aa9.14□□□□□ -0.95
CHCHD3-202ENST00000423635 MOBPQ13875 183 aa9.14□□□□□ -0.95
CHCHD3-202ENST00000423635 KIAA1644Q3SXP7 199 aa9.14□□□□□ -0.95
CHCHD3-202ENST00000423635 SFTA2Q6UW10 78 aa9.14□□□□□ -0.95
CHCHD3-202ENST00000423635 KCNQ1DNQ9H478 68 aa9.14□□□□□ -0.95
CHCHD3-202ENST00000423635 SMCPP49901 116 aaPredicted RBP9.13□□□□□ -0.95
CHCHD3-202ENST00000423635 PCOTHQ58A44 107 aa9.13□□□□□ -0.95
CHCHD3-202ENST00000423635 GAGE2AQ6NT46 116 aa9.13□□□□□ -0.95
CHCHD3-202ENST00000423635 IGLV8-61A0A075B6I0 122 aa9.12□□□□□ -0.95
CHCHD3-202ENST00000423635 IGLV9-49A0A0B4J1Y8 123 aa9.12□□□□□ -0.95
CHCHD3-202ENST00000423635 KRTAP9-7A8MTY7 169 aa9.12□□□□□ -0.95
CHCHD3-202ENST00000423635 ZNF22P17026 224 aaPredicted RBP9.12□□□□□ -0.95
CHCHD3-202ENST00000423635 ETDCA0A1B0GVM5 59 aa9.09□□□□□ -0.95
CHCHD3-202ENST00000423635 LINC00158P58513 81 aa9.09□□□□□ -0.95
CHCHD3-202ENST00000423635 FLGP20930 4061 aaPredicted RBP9.08□□□□□ -0.96
CHCHD3-202ENST00000423635 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.07□□□□□ -0.96
CHCHD3-202ENST00000423635 ERC2-IT1O76042 136 aa9.07□□□□□ -0.96
CHCHD3-202ENST00000423635 B5MCH6 92 aa9.05□□□□□ -0.96
CHCHD3-202ENST00000423635 M0R2T5 61 aa9.05□□□□□ -0.96
CHCHD3-202ENST00000423635 hCG_2014768A0A024R1R8 64 aa9.05□□□□□ -0.96
CHCHD3-202ENST00000423635 NDUFA6P56556 154 aa9.05□□□□□ -0.96
CHCHD3-202ENST00000423635 BOD1L2Q8IYS8 172 aa9.05□□□□□ -0.96
CHCHD3-202ENST00000423635 A0A0U1RRA0 63 aa9.04□□□□□ -0.96
CHCHD3-202ENST00000423635 NCR3O14931 201 aa9.04□□□□□ -0.96
CHCHD3-202ENST00000423635 TRBV10-3A0A0K0K1G6 114 aa9.03□□□□□ -0.96
CHCHD3-202ENST00000423635 C11orf86A6NJI1 115 aa9.03□□□□□ -0.96
CHCHD3-202ENST00000423635 FA2HQ7L5A8 372 aa9.03□□□□□ -0.96
CHCHD3-202ENST00000423635 TRAV9-1A0A075B6T8 112 aa9.02□□□□□ -0.97
CHCHD3-202ENST00000423635 Q9BRP9 147 aa9.02□□□□□ -0.97
CHCHD3-202ENST00000423635 SMCO4Q9NRQ5 59 aa9.02□□□□□ -0.97
CHCHD3-202ENST00000423635 A0A096LNJ9 63 aa9.01□□□□□ -0.97
CHCHD3-202ENST00000423635 TMEM170BQ5T4T1 132 aa9.01□□□□□ -0.97
CHCHD3-202ENST00000423635 ATP6V1G1O75348 118 aa9□□□□□ -0.97
CHCHD3-202ENST00000423635 SMIM13P0DJ93 91 aa9□□□□□ -0.97
CHCHD3-202ENST00000423635 S100A12P80511 92 aa9□□□□□ -0.97
CHCHD3-202ENST00000423635 SSPOA2VEC9 5147 aa8.98□□□□□ -0.97
CHCHD3-202ENST00000423635 C9orf92A6NGG3 77 aa8.98□□□□□ -0.97
CHCHD3-202ENST00000423635 C9orf153Q5TBE3 101 aa8.98□□□□□ -0.97
CHCHD3-202ENST00000423635 MIR7-3HGQ8N6C7 128 aa8.98□□□□□ -0.97
CHCHD3-202ENST00000423635 Q6ZRX8 168 aa8.97□□□□□ -0.97
CHCHD3-202ENST00000423635 BAGE3Q86Y29 109 aa8.97□□□□□ -0.97
CHCHD3-202ENST00000423635 TMEM223A0PJW6 202 aa8.95□□□□□ -0.98
CHCHD3-202ENST00000423635 MEIG1Q5JSS6 88 aa8.94□□□□□ -0.98
CHCHD3-202ENST00000423635 COX6B2Q6YFQ2 88 aa8.94□□□□□ -0.98
CHCHD3-202ENST00000423635 LIMD2Q9BT23 127 aa8.94□□□□□ -0.98
CHCHD3-202ENST00000423635 USH2AO75445 5202 aa8.93□□□□□ -0.98
CHCHD3-202ENST00000423635 LINC00587B1AMM8 73 aa8.93□□□□□ -0.98
CHCHD3-202ENST00000423635 HBDP02042 147 aa8.93□□□□□ -0.98
CHCHD3-202ENST00000423635 DDTP30046 118 aa8.93□□□□□ -0.98
CHCHD3-202ENST00000423635 HERV-K104P63124 156 aa8.93□□□□□ -0.98
CHCHD3-202ENST00000423635 URB1-AS1Q96HZ7 61 aa8.93□□□□□ -0.98
CHCHD3-202ENST00000423635 LOC107984156A0A0G2JMH3 177 aa8.92□□□□□ -0.98
CHCHD3-202ENST00000423635 TRBV10-2A0A0K0K1G8 114 aa8.92□□□□□ -0.98
CHCHD3-202ENST00000423635 IGLV6-57P01721 117 aa8.92□□□□□ -0.98
CHCHD3-202ENST00000423635 LINC00614P0C842 121 aa8.92□□□□□ -0.98
CHCHD3-202ENST00000423635 COX19Q49B96 90 aa8.92□□□□□ -0.98
CHCHD3-202ENST00000423635 ARL17AQ8IVW1 177 aa8.92□□□□□ -0.98
CHCHD3-202ENST00000423635 FABP9Q0Z7S8 132 aa8.91□□□□□ -0.98
CHCHD3-202ENST00000423635 CHTOPQ9Y3Y2 248 aaKnown RBP8.91□□□□□ -0.98
CHCHD3-202ENST00000423635 C5orf52A6NGY3 159 aa8.9□□□□□ -0.98
CHCHD3-202ENST00000423635 JOSD1Q15040 202 aaPredicted RBP8.9□□□□□ -0.98
CHCHD3-202ENST00000423635 PMCHL1Q16048 86 aa8.88□□□□□ -0.99
CHCHD3-202ENST00000423635 ST20-AS1Q8NBB2 130 aa8.88□□□□□ -0.99
CHCHD3-202ENST00000423635 MAP1LC3CQ9BXW4 147 aa8.88□□□□□ -0.99
CHCHD3-202ENST00000423635 HRCT1Q6UXD1 115 aa8.87□□□□□ -0.99
CHCHD3-202ENST00000423635 S100PP25815 95 aa8.86□□□□□ -0.99
CHCHD3-202ENST00000423635 RPL37P61927 97 aaKnown RBP8.86□□□□□ -0.99
CHCHD3-202ENST00000423635 C18orf32Q8TCD1 76 aa8.86□□□□□ -0.99
CHCHD3-202ENST00000423635 SPRR1BP22528 89 aa8.85□□□□□ -0.99
CHCHD3-202ENST00000423635 TRAV12-1A0A0B4J245 112 aa8.84□□□□□ -0.99
CHCHD3-202ENST00000423635 MYMXA0A1B0GTQ4 84 aa8.84□□□□□ -0.99
CHCHD3-202ENST00000423635 SEC11CQ9BY50 192 aa8.84□□□□□ -0.99
CHCHD3-202ENST00000423635 SPANXB1Q9NS25 103 aaPredicted RBP8.84□□□□□ -0.99
CHCHD3-202ENST00000423635 TRAV23DV6A0A075B6W5 121 aa8.82□□□□□ -1
CHCHD3-202ENST00000423635 A6NJY4 79 aa8.82□□□□□ -1
CHCHD3-202ENST00000423635 S100A7L2Q5SY68 101 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms