RNA–Protein interactions for RNA: ENST00000422875.5

TRAPPC10-203, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best)

Gene TRAPPC10, Length 5,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-203ENST00000422875 C10orf25Q5T742 122 aa12.21□□□□□ -0.45
TRAPPC10-203ENST00000422875 PCOTHQ58A44 107 aa12.2□□□□□ -0.46
TRAPPC10-203ENST00000422875 ESRGQ1W209 222 aa12.2□□□□□ -0.46
TRAPPC10-203ENST00000422875 SPATA3Q8NHX4 192 aa12.19□□□□□ -0.46
TRAPPC10-203ENST00000422875 IL17DQ8TAD2 202 aa12.18□□□□□ -0.46
TRAPPC10-203ENST00000422875 MKI67P46013 3256 aaKnown RBP12.17□□□□□ -0.46
TRAPPC10-203ENST00000422875 LITAFQ99732 161 aa12.16□□□□□ -0.46
TRAPPC10-203ENST00000422875 Q9BRP9 147 aa12.16□□□□□ -0.46
TRAPPC10-203ENST00000422875 CXCL6P80162 114 aa12.15□□□□□ -0.46
TRAPPC10-203ENST00000422875 FHL3Q13643 280 aa12.15□□□□□ -0.46
TRAPPC10-203ENST00000422875 LINC01561Q8N1V8 128 aa12.15□□□□□ -0.46
TRAPPC10-203ENST00000422875 PRLHP81277 87 aa12.15□□□□□ -0.46
TRAPPC10-203ENST00000422875 ZNF706Q9Y5V0 76 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC10-203ENST00000422875 IGHV6-1A0A0B4J1U7 121 aa12.14□□□□□ -0.47
TRAPPC10-203ENST00000422875 C2orf48Q96LS8 159 aa12.14□□□□□ -0.47
TRAPPC10-203ENST00000422875 EIF4EBP3O60516 100 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC10-203ENST00000422875 C4orf26Q17RF5 130 aa12.14□□□□□ -0.47
TRAPPC10-203ENST00000422875 C7orf33Q8WU49 177 aa12.14□□□□□ -0.47
TRAPPC10-203ENST00000422875 KIAA0087Q14695 138 aa12.12□□□□□ -0.47
TRAPPC10-203ENST00000422875 MAST4O15021 2626 aa12.12□□□□□ -0.47
TRAPPC10-203ENST00000422875 H0Y9P7 68 aa12.12□□□□□ -0.47
TRAPPC10-203ENST00000422875 HECTD1Q9ULT8 2610 aa12.12□□□□□ -0.47
TRAPPC10-203ENST00000422875 C16orf95Q9H693 158 aa12.11□□□□□ -0.47
TRAPPC10-203ENST00000422875 SMIM29Q86T20 159 aa12.11□□□□□ -0.47
TRAPPC10-203ENST00000422875 LAMA3Q16787 3333 aa12.11□□□□□ -0.47
TRAPPC10-203ENST00000422875 HCG22E2RYF7 251 aa12.1□□□□□ -0.47
TRAPPC10-203ENST00000422875 C6orf48Q9UBA6 75 aa12.1□□□□□ -0.47
TRAPPC10-203ENST00000422875 LINC00474Q9P2X8 69 aa12.09□□□□□ -0.47
TRAPPC10-203ENST00000422875 AKAP13Q12802 2813 aa12.08□□□□□ -0.48
TRAPPC10-203ENST00000422875 SMCR5Q8TEV8 140 aa12.08□□□□□ -0.48
TRAPPC10-203ENST00000422875 COL27A1Q8IZC6 1860 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC10-203ENST00000422875 K7ERS5 55 aa12.07□□□□□ -0.48
TRAPPC10-203ENST00000422875 CIRBP-AS1Q8TBR5 109 aa12.07□□□□□ -0.48
TRAPPC10-203ENST00000422875 C22orf24Q9Y442 160 aa12.07□□□□□ -0.48
TRAPPC10-203ENST00000422875 Q6ZQT0 140 aa12.05□□□□□ -0.48
TRAPPC10-203ENST00000422875 HTTP42858 3142 aa12.05□□□□□ -0.48
TRAPPC10-203ENST00000422875 PRO0628Q9UI54 55 aa12.05□□□□□ -0.48
TRAPPC10-203ENST00000422875 RETNLBQ9BQ08 111 aa12.04□□□□□ -0.48
TRAPPC10-203ENST00000422875 RPS28P62857 69 aaKnown RBP12.04□□□□□ -0.48
TRAPPC10-203ENST00000422875 UNC80Q8N2C7 3258 aa12.03□□□□□ -0.48
TRAPPC10-203ENST00000422875 TM2D3Q9BRN9 247 aa12.03□□□□□ -0.48
TRAPPC10-203ENST00000422875 LY6G6CO95867 125 aa12.02□□□□□ -0.48
TRAPPC10-203ENST00000422875 PCSK5Q92824 1860 aa12.02□□□□□ -0.49
TRAPPC10-203ENST00000422875 LINC01556Q5JQF7 62 aa12.02□□□□□ -0.49
TRAPPC10-203ENST00000422875 NHLRC4P0CG21 123 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC10-203ENST00000422875 C1orf64Q8NEQ6 169 aa12□□□□□ -0.49
TRAPPC10-203ENST00000422875 LINC00167Q96N53 147 aa12□□□□□ -0.49
TRAPPC10-203ENST00000422875 X6R8D5 127 aa12□□□□□ -0.49
TRAPPC10-203ENST00000422875 hDV103S1A0JD37 113 aa11.98□□□□□ -0.49
TRAPPC10-203ENST00000422875 F8WDY8 70 aa11.97□□□□□ -0.49
TRAPPC10-203ENST00000422875 ELOF1P60002 83 aaKnown RBP11.97□□□□□ -0.49
TRAPPC10-203ENST00000422875 KLK9Q2XQG4 91 aa11.97□□□□□ -0.49
TRAPPC10-203ENST00000422875 SPINK1P00995 79 aa11.95□□□□□ -0.5
TRAPPC10-203ENST00000422875 BCE1O60756 84 aa11.95□□□□□ -0.5
TRAPPC10-203ENST00000422875 LOC110117498A0A087WWA1 95 aa11.94□□□□□ -0.5
TRAPPC10-203ENST00000422875 CHD9Q3L8U1 2897 aa11.91□□□□□ -0.5
TRAPPC10-203ENST00000422875 MAP1AP78559 2803 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC10-203ENST00000422875 ST20-AS1Q8NBB2 130 aa11.91□□□□□ -0.5
TRAPPC10-203ENST00000422875 Q8NBF4 154 aa11.91□□□□□ -0.5
TRAPPC10-203ENST00000422875 COL4A2P08572 1712 aa11.9□□□□□ -0.5
TRAPPC10-203ENST00000422875 FLNAP21333 2647 aaKnown RBP11.89□□□□□ -0.51
TRAPPC10-203ENST00000422875 WDFY4Q6ZS81 3184 aa11.87□□□□□ -0.51
TRAPPC10-203ENST00000422875 PRUNE2Q8WUY3 3088 aa11.87□□□□□ -0.51
TRAPPC10-203ENST00000422875 LINC00476Q8WZB0 136 aa11.87□□□□□ -0.51
TRAPPC10-203ENST00000422875 Q6ZRX8 168 aa11.87□□□□□ -0.51
TRAPPC10-203ENST00000422875 IGLV5-52A0A0A0MRZ9 124 aa11.86□□□□□ -0.51
TRAPPC10-203ENST00000422875 XIRP2A4UGR9 3374 aa11.86□□□□□ -0.51
TRAPPC10-203ENST00000422875 MGAQ8IWI9 3026 aa11.86□□□□□ -0.51
TRAPPC10-203ENST00000422875 LIMD2Q9BT23 127 aa11.86□□□□□ -0.51
TRAPPC10-203ENST00000422875 CHD6Q8TD26 2715 aa11.85□□□□□ -0.51
TRAPPC10-203ENST00000422875 NUPR2A6NF83 97 aa11.84□□□□□ -0.51
TRAPPC10-203ENST00000422875 RPL37AP61513 92 aaKnown RBP11.82□□□□□ -0.52
TRAPPC10-203ENST00000422875 IGLV6-57P01721 117 aa11.82□□□□□ -0.52
TRAPPC10-203ENST00000422875 Q6ZRP5 223 aa11.82□□□□□ -0.52
TRAPPC10-203ENST00000422875 SPAG11AQ6PDA7 123 aa11.82□□□□□ -0.52
TRAPPC10-203ENST00000422875 VPREB1P12018 145 aa11.81□□□□□ -0.52
TRAPPC10-203ENST00000422875 Q8NAQ8 132 aa11.81□□□□□ -0.52
TRAPPC10-203ENST00000422875 ITPR3Q14573 2671 aa11.81□□□□□ -0.52
TRAPPC10-203ENST00000422875 FREM2Q5SZK8 3169 aa11.8□□□□□ -0.52
TRAPPC10-203ENST00000422875 C9orf129Q5T035 196 aaKnown RBP11.8□□□□□ -0.52
TRAPPC10-203ENST00000422875 FSHBP01225 129 aa11.8□□□□□ -0.52
TRAPPC10-203ENST00000422875 IGKV2D-30A0A075B6S6 120 aa11.8□□□□□ -0.52
TRAPPC10-203ENST00000422875 IGKV2-30P06310 120 aa11.8□□□□□ -0.52
TRAPPC10-203ENST00000422875 MOBPQ13875 183 aa11.79□□□□□ -0.52
TRAPPC10-203ENST00000422875 TRBV7-4A0A0J9YYF1 115 aa11.78□□□□□ -0.52
TRAPPC10-203ENST00000422875 PHF5AQ7RTV0 110 aaKnown RBP11.77□□□□□ -0.52
TRAPPC10-203ENST00000422875 A0A1B0GW54 56 aa11.77□□□□□ -0.53
TRAPPC10-203ENST00000422875 TRIOO75962 3097 aa11.75□□□□□ -0.53
TRAPPC10-203ENST00000422875 K7EQZ3 153 aa11.75□□□□□ -0.53
TRAPPC10-203ENST00000422875 GVQW2A0A096LPI5 108 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC10-203ENST00000422875 FAM168BA1KXE4 195 aa11.75□□□□□ -0.53
TRAPPC10-203ENST00000422875 TRAV22A0A0B4J277 110 aa11.74□□□□□ -0.53
TRAPPC10-203ENST00000422875 CSNK1G2-AS1Q8NCQ2 148 aa11.74□□□□□ -0.53
TRAPPC10-203ENST00000422875 ZNF575Q86XF7 245 aa11.73□□□□□ -0.53
TRAPPC10-203ENST00000422875 CFAP46Q8IYW2 2715 aa11.73□□□□□ -0.53
TRAPPC10-203ENST00000422875 H3BNG1 76 aa11.73□□□□□ -0.53
TRAPPC10-203ENST00000422875 EPM2AB3EWF7 344 aa11.72□□□□□ -0.53
TRAPPC10-203ENST00000422875 CHTF8P0CG12 524 aa11.72□□□□□ -0.53
TRAPPC10-203ENST00000422875 SERTAD4-AS1Q5TG53 156 aa11.72□□□□□ -0.53
TRAPPC10-203ENST00000422875 VPS13AQ96RL7 3174 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms